Gene

KWMTBOMO01571

Pre Gene Modal

BGIBMGA008838

Annotation

PREDICTED:_protein_msta?_isoform_A-like_[Amyelois_transitella]

Location

Bomo_Chr3(-):14107687-14116169      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.884

CDS

ATGCTACTTTGTATATTCTGTCAAAAGAAGAGGGGCAAGAGCGATGGACGAAACAAGGAGAATATCTTGCATTCTGACAAAGAAGAAATAGAAGAAGTCTCAACAGCCGATGAGAAGAAAAGCCTATGTTATGAAATCAAATACTCTGATGTTATGGGCAGGTACATTGTGGCAGCAAGAGACATTAAAGCCGGAGAAATCATCATAGAGGAACCGGCTTTAGCTGTTGGACCTTGCACGGGCTGTGCTCTCATATGCCTCGGATGCTACAGGGAAATAGACGAAAATAATATTAACAAATGCAAAAACTGCAAGTGGCCAGTTTGCAGTGGTTCGTGTCCCGGACAAGGAAAATACACAGGTCATTCGACTTACGAATGCGAAACGTTGCGAAGTATACCTCCAGACTACTCTAAGCTTGAAGACTTGAGGGATTCCTACCAAGCATTGATGCCGTTAAGATGTCTACTTTTAAAGAAGGCAGATCCGCCGAAATGGCAGGCTTTATCAGCTATGGAAGCCCACAATGAGCTCCGACGGGCGAGAGGAGATATTTGGCCGACGAACGAGAAGAATGTAGTGCAAAGGATCAAGAGCTGGGGTCTGGAATACGATCCCGAGGAAATACACACTGTCTGTGGGATTTTAGAGGTTAATGCCTTCGAAGTGGGTGGTAGCGGGGCGAACGCTCGTGCTCTTTACGATCGAGCCTATCTCTTGGCCCACGACTGCACTCCCTCCACGACACACACGGACTCCGAGAGGACTCCGGGCAGACCTATAACCGTCAGAGCTTCAATAGCTCATAAAGCCGGAGACTTGATCTCTTTGTGTTACGCTTACACGCTGCAGGGTACACTAAAACGTCGTGAGCACATAAAGCACAGCAAGTTCTTCTGGTGCTCGTGCCGGCGGTGCGCGGACCGCGCCGAGCTCGGCACCTCCGCGTCCGCCTTCCGCTGTCCGCGGTGCGCGGGCGCCGTGCTACCAGAGCGGCCCCTGCAGCGCGACCAGCCCTGGGCCTGCACCCGCGACCACTGCCACTACACCATGCCGGCCGCCGCCGTGCACTTGCTGCTGCAGAGGCTCACAGACGAATACGACCAGATTGACGCGAACGACGTTCCTGGCTTCGAGAATTTCCTCCACAAGTACAGGAACGTGTTGCTGCCCAGTCATTACCTTTGTCTCTCGGCGAAGCACTCCCTCAGTCAGCTGTACGGAAAGGTCACAGACTACATGATACACGAGATGCCCGATACTGAACTGAACAGAAAAATAGATATATGCAGAGATCTGATGAAAGTGTTTGATGTAATCGAACCCGGATATTCGAGGTTGAGAGGTGTAACTCTGTACGAACTACACGCGCCTCTAATGATATTGACAACAAGAGACTTCGAAAAGAAAGCGATAACGAAAGAGAGTCTTCGGAATCGTCTTAAAGAGATAGTACAGTATTTACAAGAATCGGCCCTAATTCTCGGGTTCGAACCAGCGCACTCATCCGAAGGTCTCATGGCGGCGGCCGCAAGAGACGCCCTGAAAAAAATCAAAACATGGGAGCAGATCATCGGCAAGATATCCTGA

Protein

MLLCIFCQKKRGKSDGRNKENILHSDKEEIEEVSTADEKKSLCYEIKYSDVMGRYIVAARDIKAGEIIIEEPALAVGPCTGCALICLGCYREIDENNINKCKNCKWPVCSGSCPGQGKYTGHSTYECETLRSIPPDYSKLEDLRDSYQALMPLRCLLLKKADPPKWQALSAMEAHNELRRARGDIWPTNEKNVVQRIKSWGLEYDPEEIHTVCGILEVNAFEVGGSGANARALYDRAYLLAHDCTPSTTHTDSERTPGRPITVRASIAHKAGDLISLCYAYTLQGTLKRREHIKHSKFFWCSCRRCADRAELGTSASAFRCPRCAGAVLPERPLQRDQPWACTRDHCHYTMPAAAVHLLLQRLTDEYDQIDANDVPGFENFLHKYRNVLLPSHYLCLSAKHSLSQLYGKVTDYMIHEMPDTELNRKIDICRDLMKVFDVIEPGYSRLRGVTLYELHAPLMILTTRDFEKKAITKESLRNRLKEIVQYLQESALILGFEPAHSSEGLMAAAARDALKKIKTWEQIIGKIS

Uniprot

H9JH41   A0A2A4J8G0   A0A2H1W6H7   A0A2W1BR26   A0A194Q325   A0A0N1PHS6   + More
A0A212EIW5   A0A1W4WHY5   D6WUY1   U4UGH4   A0A0T6AX24   A0A067RM42   A0A2J7RQQ6   A0A1Y1LWP9   N6UIX5   A0A1B6CES5   A0A336LB95   A0A336N447   A0A336MKR3   A0A1J1HKS4   A0A1L8DX66   A0A1B0D7G8   A0A1B6FLR5   A0A182FUB2   Q17JR4   A0A1S4F084   A0A1J1IRJ1   A0A182G643   A0A023ETM5   A0A1B6KMU9   A0A0L0C386   B0X2T0   A0A1B6DIM2   A0A182M1X4   B4R2Q6   A0A182QX49   A0A182PLA8   Q9VZ41   A0A240PLK3   B3NVC0   A0A1Q3FMT7   A0A1W4UNY3   A0A182WFB9   B4PYV3   A0A182K319   B3MQ91   A0A0R1EBD1   A0A0A1X7X9   E0VN95   B4L719   B4JXB5   A0A1I8MYP4   T1P8T7   A0A182MY56   A0A034V8C4   A0A182XC38   A0A1B0A1B4   A0A0M5JAK7   A0A1A9VWM4   A0A182V4M0   A0A182YNX3   A0A1A9YQE5   A0A1B0AY24   A0A182HND6   A0A0R3NZC6   Q29HZ7   B4MAM9   A0A1I8NZ76   B4H4T1   A0A182LP98   B4MSI4   A0A182GED1   A0A0K8U981   A0A0K8UBP6   A0A1A9WV71   A0A3B0L060   Q7QL17   W8AES0   A0A0K8VM45   W5JJL8   A0A023F6F6   A0A0P6GTM2   A0A0N8B7V8   A0A0N8BMW8   B4IDW9   A0A182TSE0   A0A0N8ARH9   A0A0P5JD04   A0A0N8DXJ7   A0A0P5ZLY7   A0A0N7ZQS5   A0A0P5J7Y8   A0A0P5YS73   A0A0P5PN37   A0A0P5SQ74   A0A0P5PAD1   A0A067R714   A0A0N8EEV6   A0A0P5FIF2   A0A0P6H3U7  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
23537049    24845553    28004739    17510324    26483478    24945155    26108605    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    25830018    20566863    25315136    25348373    25244985    15632085    20966253    12364791    24495485    20920257    23761445    25474469   

EMBL

BABH01041036    BABH01041037    NWSH01002406    PCG68365.1    ODYU01006654    SOQ48689.1    + More
KZ149928    PZC77488.1    KQ459562    KPI99743.1    KQ461158    KPJ08070.1    AGBW02014564    OWR41411.1    KQ971357    EFA08507.1    KB632286    ERL91443.1    LJIG01022602    KRT79705.1    KK852544    KDR21630.1    NEVH01000618    PNF43170.1    GEZM01045051    JAV77952.1    APGK01018201    KB740071    ENN81700.1    GEDC01031647    GEDC01029336    GEDC01025393    GEDC01013625    GEDC01004092    JAS05651.1    JAS07962.1    JAS11905.1    JAS23673.1    JAS33206.1    UFQS01002786    UFQT01002786    SSX14664.1    SSX34061.1    UFQS01004985    UFQT01004985    SSX16646.1    SSX35843.1    UFQT01001113    SSX28967.1    CVRI01000006    CRK88012.1    GFDF01003046    JAV11038.1    AJVK01012426    GECZ01018621    JAS51148.1    CH477231    EAT46910.1    CVRI01000058    CRL02851.1    JXUM01044438    JXUM01044439    JXUM01044440    JXUM01044441    KQ561401    KXJ78702.1    GAPW01000920    JAC12678.1    GEBQ01027217    JAT12760.1    JRES01000955    KNC26808.1    DS232298    EDS39404.1    GEDC01011749    JAS25549.1    AXCM01000948    CM000366    EDX17605.1    AXCN02002034    AE014298    AAF47987.2    CH954180    EDV46108.2    GFDL01006193    JAV28852.1    CM000162    EDX02031.1    CH902621    EDV44517.1    KRK06527.1    GBXI01007276    JAD07016.1    DS235335    EEB14851.1    CH933812    EDW06165.1    CH916376    EDV95391.1    KA645191    AFP59820.1    GAKP01019396    JAC39556.1    CP012528    ALC48974.1    JXJN01005505    APCN01001914    CH379064    KRT06398.1    EAL31609.2    CH940655    EDW66288.2    CH479209    EDW32693.1    CH963851    EDW75073.2    JXUM01057790    KQ561971    KXJ77030.1    GDHF01029166    JAI23148.1    GDHF01028217    GDHF01024193    JAI24097.1    JAI28121.1    OUUW01000028    SPP89768.1    AAAB01008090    EAA03232.3    GAMC01019845    GAMC01019841    JAB86710.1    GDHF01012357    JAI39957.1    ADMH02000957    ETN64572.1    GBBI01001898    JAC16814.1    GDIQ01029719    JAN65018.1    GDIQ01204195    JAK47530.1    GDIQ01162115    GDIQ01160706    JAK89610.1    CH480830    EDW45777.1    GDIQ01250027    JAK01698.1    GDIQ01204242    GDIQ01201858    GDIQ01201857    GDIQ01031065    JAK49868.1    GDIQ01082092    JAN12645.1    GDIP01055387    JAM48328.1    GDIP01221737    JAJ01665.1    GDIQ01201856    GDIQ01094836    JAK49869.1    GDIP01053845    JAM49870.1    GDIQ01147033    JAL04693.1    GDIQ01100999    JAL50727.1    GDIQ01131383    JAL20343.1    KK852699    KDR18208.1    GDIQ01033620    JAN61117.1    GDIQ01254126    JAJ97598.1    GDIQ01035121    JAN59616.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000192223    + More
UP000007266    UP000030742    UP000027135    UP000235965    UP000019118    UP000183832    UP000092462    UP000069272    UP000008820    UP000069940    UP000249989    UP000037069    UP000002320    UP000075883    UP000000304    UP000075886    UP000075885    UP000000803    UP000075880    UP000008711    UP000192221    UP000075920    UP000002282    UP000075881    UP000007801    UP000009046    UP000009192    UP000001070    UP000095301    UP000075884    UP000076407    UP000092445    UP000092553    UP000078200    UP000075903    UP000076408    UP000092443    UP000092460    UP000075840    UP000001819    UP000008792    UP000095300    UP000008744    UP000075882    UP000007798    UP000091820    UP000268350    UP000007062    UP000000673    UP000001292    UP000075902   

PRIDE

H9JH41    Q9VZ41   

Pfam

PF00856   SET        + More
PF15393   DUF4615
PF01753   zf-MYND

Interpro

IPR001214   SET_dom        + More
IPR011011   Znf_FYVE_PHD       
IPR017896   4Fe4S_Fe-S-bd       
IPR029274   DUF4615       
IPR011990   TPR-like_helical_dom_sf       
IPR002893   Znf_MYND       
IPR001190   SRCR       

SUPFAM

SSF57903   SSF57903       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JH41   A0A2A4J8G0   A0A2H1W6H7   A0A2W1BR26   A0A194Q325   A0A0N1PHS6   + More
A0A212EIW5   A0A1W4WHY5   D6WUY1   U4UGH4   A0A0T6AX24   A0A067RM42   A0A2J7RQQ6   A0A1Y1LWP9   N6UIX5   A0A1B6CES5   A0A336LB95   A0A336N447   A0A336MKR3   A0A1J1HKS4   A0A1L8DX66   A0A1B0D7G8   A0A1B6FLR5   A0A182FUB2   Q17JR4   A0A1S4F084   A0A1J1IRJ1   A0A182G643   A0A023ETM5   A0A1B6KMU9   A0A0L0C386   B0X2T0   A0A1B6DIM2   A0A182M1X4   B4R2Q6   A0A182QX49   A0A182PLA8   Q9VZ41   A0A240PLK3   B3NVC0   A0A1Q3FMT7   A0A1W4UNY3   A0A182WFB9   B4PYV3   A0A182K319   B3MQ91   A0A0R1EBD1   A0A0A1X7X9   E0VN95   B4L719   B4JXB5   A0A1I8MYP4   T1P8T7   A0A182MY56   A0A034V8C4   A0A182XC38   A0A1B0A1B4   A0A0M5JAK7   A0A1A9VWM4   A0A182V4M0   A0A182YNX3   A0A1A9YQE5   A0A1B0AY24   A0A182HND6   A0A0R3NZC6   Q29HZ7   B4MAM9   A0A1I8NZ76   B4H4T1   A0A182LP98   B4MSI4   A0A182GED1   A0A0K8U981   A0A0K8UBP6   A0A1A9WV71   A0A3B0L060   Q7QL17   W8AES0   A0A0K8VM45   W5JJL8   A0A023F6F6   A0A0P6GTM2   A0A0N8B7V8   A0A0N8BMW8   B4IDW9   A0A182TSE0   A0A0N8ARH9   A0A0P5JD04   A0A0N8DXJ7   A0A0P5ZLY7   A0A0N7ZQS5   A0A0P5J7Y8   A0A0P5YS73   A0A0P5PN37   A0A0P5SQ74   A0A0P5PAD1   A0A067R714   A0A0N8EEV6   A0A0P5FIF2   A0A0P6H3U7  

PDB

6FND     E-value=0.0109519,     Score=92

KEGG

101738711    no KO assigned | (RefSeq) protein msta, isoform A

GO

GO:0008168   GO:0042826   GO:0010629   GO:0005737   GO:0005634   GO:0046872   GO:0005044   GO:0016020   GO:0005515   GO:0007165   GO:0006468   GO:0004190   GO:0006508   GO:0006811   GO:0003779   GO:0016021  

Length:

529

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00774999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00173

outside

1  -  529

 

 

Pi

161.742703

Theta

143.488171

Tajima's D

0.561743

CLR

0.05762

CSRT

0.535323233838308

Interpretation

Uncertain