Gene

KWMTBOMO01570

Pre Gene Modal

BGIBMGA008839

Annotation

PREDICTED:_protein_msta?_isoform_B_[Bombyx_mori]

Location

Bomo_Chr3(-):14097007-14104029      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.333 Nuclear   Reliability : 1.777

CDS

ATGGTAGAACAGGGTTCTTGTGCAGTTTGTCTATCGCCTGCGCCCCAAAAATGTTCAGGATGTCAGTACGTCTACTACTGTTCTAAAGAACATCAGAAACAAGATTGGAAGCAGCACAAATACCAGTGCTCCCCAGTACGAGTGAAAGAAGACTCGCAATTCGGGAGGTTTCTCGAGGCCACGCGAGAAATAAAATCTGGTGATATTATCTTGAAGGAGAAACCATTGATATCGGGACCTGCGCAGGTGACTCCACCAGTATGTCTCGGCTGCTACAAATTGCTGGAAGAAGGAAAGACTGTGAAATGTAGCAAGTGTGGTTGGCCGTTCTGTTCTGAGCTGTGCACTGAGAAACCAGAACACGAACCTGAATGTCATTATACGGAAAAAAGAGGAGAAAAGGTCAACATAACAACATTTGGTTCGCCACATCCGAACTATCAATGCATCACCGTCCTCCGATGCTTGTACCAGCGGGACCACAATGAGCCGTTGTGGAAGAAGCTCCAAGCGTTACAGTCTCACGACGAGGACAGGAGGGGCACAGACAAGTGGAATAACGATAAAAAGATGATCTGCGATTTCATATGGATGTTCTTCAAACTTGACGGCGTCTTCAACGAGGAAGAAATAATGAAATGCTGTGGGATTTTGCAGATCAACGGGCATGAAGTACCTTTAATGGAGCCGGAGTATCTGGCAGTATACGACCGCATCTCCATGGTCGAACACAACTGTCGCGCCAACTGTAACAAAAGTTTTACGTCTGCCGGAGAAATTATCCTGTGTGCTGGAGACAGTATCAAGACTGGCGAGCATGTAACAGTCTGCTACACAGACCCCTTGTGGGGCACGGAAGCGCGGCGCCACCACCTTGCCGACTCCAAGTTCTTCGAATGCAACTGTGAGAGATGCTCTGACGTCACCGAACTCGCGACAATGTACAGTGCTGTCAAATGTAAAAAGAAGGACTGCAAAGGCTATCTTCTACCGGAAACTTTCATCGTACCGCTCTTGCACAAGACGAAGAAACCTGATCCTGAAACTCGTAACTTAGACAGAAAGTTCTGGATTTGTAATAGCTGCAAGGACGCCGTATCGGATGCCATTATACAACAACTCCTGCAGGATATTGGACGAGAACTGAGCGTTATGCCAAAGGGTGAAGCTGATGCTTGCGAAAGGTAA

Protein

MVEQGSCAVCLSPAPQKCSGCQYVYYCSKEHQKQDWKQHKYQCSPVRVKEDSQFGRFLEATREIKSGDIILKEKPLISGPAQVTPPVCLGCYKLLEEGKTVKCSKCGWPFCSELCTEKPEHEPECHYTEKRGEKVNITTFGSPHPNYQCITVLRCLYQRDHNEPLWKKLQALQSHDEDRRGTDKWNNDKKMICDFIWMFFKLDGVFNEEEIMKCCGILQINGHEVPLMEPEYLAVYDRISMVEHNCRANCNKSFTSAGEIILCAGDSIKTGEHVTVCYTDPLWGTEARRHHLADSKFFECNCERCSDVTELATMYSAVKCKKKDCKGYLLPETFIVPLLHKTKKPDPETRNLDRKFWICNSCKDAVSDAIIQQLLQDIGRELSVMPKGEADACER

Uniprot

H9JH42   A0A2A4JA02   A0A2W1BWA6   A0A2H1W6K0   A0A194Q405   A0A0N1INM4   + More
A0A212FA54   A0A067RCS6   A0A1W4WG27   A0A139WDX7   T1I1Y7   V5I9L0   U4TWJ2   N6UBC5   A0A1B6KW78   U4TWD0   N6TQN3   A0A084VRL9   A0A336MFT2   A0A182HND0   Q7QGG8   A0A182LP89   A0A182VMT4   A0A336MSP7   A0A336MII8   A0A182XC32   A0A1B6LJ04   A0A182U585   A0A1B6LFN0   A0A1B6JIQ3   A0A182QTK0   A0A182Y5X0   A0A182FUB9   A0A182JVG9   A0A182RQZ4   A0A182J9R3   A0A182W2G3   A0A1Q3G585   A0A182MD85   A0A182MY62   A0A182GEC9   A0A023EZV5   A0A1S4F0F0   Q17JR2   A0A154PC23   A0A146KWH5   A0A3Q0IYE9   A0A1A9WNC5   A0A1Y1N7B3   A0A088A9C0   A0A0L0CBP4   A0A1Y1N7Z3   A0A1B0AKC5   A0A1A9V7P1   A0A0A9Y6I6   A0A232EFX9   K7J0F2   A0A1I8MXW6   W8C7K8   A0A034WPA2   A0A3B0JMW8   A0A182PU93   B4H526   B4P730   B4JA05   A0A1A9XPS2   B4KRB6   B5E1F5   B3NR70   A0A2A3EFI2   A0A0K8WET2   A0A1B0AM53   A0A0M4EFV0   Q7K561   A0A0J9U1R8   B4HRA0   A0A1W4WA57   A0A0A1XD82   B3MDY3   B4MJN1   A0A2S2Q9E4   A0A1B0D7G9   A0A2P8ZHZ6   B4LLD4   A0A2H8TU54   W5JCL7   A0A0T6B9M4   A0A1J1I0J5   J9JY07   A0A2S2PQ37   A0A1B0GHX9   W5JT41   A0A0K2TV79   A0A2S2N781   A0A1B6CC67   A0A0L7QM18   A0A182FLM7   A0A2P2I598   U5EVB9   E9G7C4  

Pubmed

19121390    28756777    26354079    22118469    24845553    18362917    + More
19820115    23537049    24438588    12364791    20966253    25244985    26483478    25474469    17510324    26823975    28004739    26108605    25401762    28648823    20075255    25315136    24495485    25348373    17994087    17550304    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25830018    29403074    20920257    23761445    21292972   

EMBL

BABH01041038    BABH01041039    BABH01041040    NWSH01002406    PCG68364.1    KZ149928    + More
PZC77487.1    ODYU01006654    SOQ48688.1    KQ459562    KPI99744.1    KQ461158    KPJ08071.1    AGBW02009521    OWR50603.1    KK852544    KDR21631.1    KQ971357    KYB26114.1    ACPB03006195    GALX01002750    JAB65716.1    KB631763    ERL85939.1    APGK01035775    APGK01035776    APGK01035777    APGK01035778    APGK01035779    APGK01035780    KB740928    ENN77956.1    GEBQ01024270    JAT15707.1    KB631759    ERL85859.1    APGK01058762    KB741291    ENN70601.1    ATLV01015746    KE525033    KFB40613.1    UFQT01001171    SSX29262.1    APCN01001905    AAAB01008834    EAA05706.4    UFQT01001115    SSX28968.1    SSX29261.1    GEBQ01016337    JAT23640.1    GEBQ01017492    JAT22485.1    GECU01008649    JAS99057.1    AXCN02002036    GFDL01000075    JAV34970.1    AXCM01010579    JXUM01057778    JXUM01057779    KQ561971    KXJ77028.1    GBBI01003920    JAC14792.1    CH477231    EAT46912.1    KQ434869    KZC09337.1    GDHC01019489    JAP99139.1    GEZM01011203    JAV93599.1    JRES01000644    KNC29660.1    GEZM01011204    JAV93598.1    GBHO01018494    JAG25110.1    NNAY01004901    OXU17269.1    GAMC01007951    JAB98604.1    GAKP01002478    JAC56474.1    OUUW01000001    SPP74666.1    CH479210    EDW32862.1    CM000158    EDW90995.1    CH916367    EDW02592.1    CH933808    EDW09332.1    CM000071    EDY69496.2    CH954179    EDV56059.1    KZ288259    PBC30497.1    GDHF01002707    JAI49607.1    JXJN01000335    CP012524    ALC41160.1    AE013599    AY051441    AAF58272.1    AAK92865.1    CM002911    KMY93730.1    CH480816    EDW47829.1    GBXI01005391    JAD08901.1    CH902619    EDV37528.1    CH963846    EDW72320.1    GGMS01005141    MBY74344.1    AJVK01012430    AJVK01012431    AJVK01012432    PYGN01000051    PSN56125.1    CH940648    EDW61886.1    GFXV01005979    MBW17784.1    ADMH02001793    ETN61078.1    LJIG01002898    KRT84042.1    CVRI01000036    CRK93100.1    ABLF02010518    GGMR01018963    MBY31582.1    AJWK01010431    ADMH02000225    ETN67311.1    HACA01011935    CDW29296.1    GGMR01000370    MBY12989.1    GEDC01026241    GEDC01017743    JAS11057.1    JAS19555.1    KQ414902    KOC59662.1    IACF01003444    LAB69060.1    GANO01003474    JAB56397.1    GL732534    EFX84442.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000027135    + More
UP000192223    UP000007266    UP000015103    UP000030742    UP000019118    UP000030765    UP000075840    UP000007062    UP000075882    UP000075903    UP000076407    UP000075902    UP000075886    UP000076408    UP000069272    UP000075881    UP000075900    UP000075880    UP000075920    UP000075883    UP000075884    UP000069940    UP000249989    UP000008820    UP000076502    UP000079169    UP000091820    UP000005203    UP000037069    UP000092445    UP000078200    UP000215335    UP000002358    UP000095301    UP000268350    UP000075885    UP000008744    UP000002282    UP000001070    UP000092443    UP000009192    UP000001819    UP000008711    UP000242457    UP000092460    UP000092553    UP000000803    UP000001292    UP000192221    UP000007801    UP000007798    UP000092462    UP000245037    UP000008792    UP000000673    UP000183832    UP000007819    UP000092461    UP000053825    UP000000305   

PRIDE

H9JH42    Q7K561   

Pfam

PF00856   SET        + More
PF01753   zf-MYND
PF00658   PABP
PF00005   ABC_tran
PF00664   ABC_membrane

Interpro

IPR001214   SET_dom        + More
IPR002893   Znf_MYND       
IPR036053   PABP-dom       
IPR002004   PABP_HYD       
IPR003593   AAA+_ATPase       
IPR039421   Type_I_exporter       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR036640   ABC1_TM_sf       
IPR027417   P-loop_NTPase       
IPR011527   ABC1_TM_dom       
IPR011990   TPR-like_helical_dom_sf       

SUPFAM

SSF63570   SSF63570        + More
SSF52540   SSF52540       
SSF90123   SSF90123       

Gene 3D

1.20.1560.10     1.25.40.10    

ProteinModelPortal

H9JH42   A0A2A4JA02   A0A2W1BWA6   A0A2H1W6K0   A0A194Q405   A0A0N1INM4   + More
A0A212FA54   A0A067RCS6   A0A1W4WG27   A0A139WDX7   T1I1Y7   V5I9L0   U4TWJ2   N6UBC5   A0A1B6KW78   U4TWD0   N6TQN3   A0A084VRL9   A0A336MFT2   A0A182HND0   Q7QGG8   A0A182LP89   A0A182VMT4   A0A336MSP7   A0A336MII8   A0A182XC32   A0A1B6LJ04   A0A182U585   A0A1B6LFN0   A0A1B6JIQ3   A0A182QTK0   A0A182Y5X0   A0A182FUB9   A0A182JVG9   A0A182RQZ4   A0A182J9R3   A0A182W2G3   A0A1Q3G585   A0A182MD85   A0A182MY62   A0A182GEC9   A0A023EZV5   A0A1S4F0F0   Q17JR2   A0A154PC23   A0A146KWH5   A0A3Q0IYE9   A0A1A9WNC5   A0A1Y1N7B3   A0A088A9C0   A0A0L0CBP4   A0A1Y1N7Z3   A0A1B0AKC5   A0A1A9V7P1   A0A0A9Y6I6   A0A232EFX9   K7J0F2   A0A1I8MXW6   W8C7K8   A0A034WPA2   A0A3B0JMW8   A0A182PU93   B4H526   B4P730   B4JA05   A0A1A9XPS2   B4KRB6   B5E1F5   B3NR70   A0A2A3EFI2   A0A0K8WET2   A0A1B0AM53   A0A0M4EFV0   Q7K561   A0A0J9U1R8   B4HRA0   A0A1W4WA57   A0A0A1XD82   B3MDY3   B4MJN1   A0A2S2Q9E4   A0A1B0D7G9   A0A2P8ZHZ6   B4LLD4   A0A2H8TU54   W5JCL7   A0A0T6B9M4   A0A1J1I0J5   J9JY07   A0A2S2PQ37   A0A1B0GHX9   W5JT41   A0A0K2TV79   A0A2S2N781   A0A1B6CC67   A0A0L7QM18   A0A182FLM7   A0A2P2I598   U5EVB9   E9G7C4  

PDB

5HQ8     E-value=3.64066e-10,     Score=156

KEGG

101739266    no KO assigned | (RefSeq) protein msta, isoform B

GO

GO:0046872   GO:0008168   GO:0005737   GO:0016021   GO:0042626   GO:0005524   GO:0008270   GO:0010629   GO:0042826   GO:0005515   GO:0007165   GO:0006468   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0003779  

PANTHER

PTHR24221  

Length:

395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0.0002

Total prob of N-in:

0.01088

outside

1  -  395

 

 

Pi

156.72939

Theta

153.665328

Tajima's D

0.083986

CLR

100.964578

CSRT

0.397730113494325

Interpretation

Possibly Positive selection