Gene

KWMTBOMO01568

Pre Gene Modal

BGIBMGA008841

Annotation

PREDICTED:_spatzle-like_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr3(-):14065480-14078619      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.647

CDS

ATGTTGATCGCGATCGCTTTCCTGTTTGTGGCGATATGGACAGGAGGCAGCTACGGCGCGGACTACGCGACCGCCTGCGCCAGGTCTGGGCGCTCGCACCGAGGCAGGATGCCGCAGGTTGCTCCCTGCGACCTCAGCAAACATAACTACTGCACCGCACCTGGGACCAGCTACCCTTGGAACGCAATACGAAGATTTGTGAGAGAAAATCAGGGTCTAATGAAACGCATGTATGGTGAAGAACGACACATATCAATCTTAAAATCCGAACTAGAAAACTACATTGAAGACGACTACGAAGAACCTCTATTGAAACAGTCAGGCTTCGCCGAAGACATCGTCAAGGCTAAAATGATGTACACTAAAACAAGTCAAGGACGTGCCATGAAAGATCGACCCTACTTTCGTCCTATTAATAGCGAAAAGACAAAAAAGACGGAAAATGACACTCTTAAAGTGAAACCTTTAGAAATAATCGAGAATAAAACAATACATAATGATGATTCTAATAGAACTGAATCTAATAATGATGAAGGTCTTTCATATAAAACCAAACTGGAGAGCATAGCTAACATTGAAATCAATAACTTAGACCAAGAAATTATTACTCTAGAAGCGGTAATAAAACAGAGCATTGAAACAAACAGCATATACCCGAAATCTTCTACAGATATTGATGCAATAGACGAGAAGAATACAACCGATATTTCAAACGCCACGTCCGCAGATTTTATCAACACAACTGATGTTATCACAGATAAATTAGAAGAAACAACAGAATCTGGAAAAGATGGATGGAATCCAATGAACGTTGATACTTCTACTTTACCTCCAACGTTACTCTTTTCTGAGCACGAGAGGATAAAAATCGAGAAGAATGAAAATAAAATTAATGAGAAAAAAGATGAGGTGAGAGTGAAGCCACAGCACCAAGAGGGATCCAGACCTGCAGTCATTAAGCTTGGCGGAGCCAACGCGTGTGAATCCACTGAGACTCTAACAGCGCCGTTCTGGGCCAACAGCACCAGAGGGGAAGTATTAGCATTACTGAATATGCACCCGTTTGAGCAGTACATACACATGGAGACCTGCTTGCATGAACGGAAACAGATGTACTGCAGAGAAGGATGCAGATGTGAGCAACAATACCGTCTCCACCGTCTCCTGGCGTATGACCCTCGTAACGAATGCAGAGGAATCTTCGCAGACTGGTTTAGGTTTCCGACCTGCTGCGTTTGCAAGTGTTACGACGTGCCGGTCGAGTTCCGAGCTCGATCGCCTCGGATCCTACATCCTCAGTACGACGAAAAAGTCAAGAGAGTCATTTTTGAAGACGTCGCCAGGGACTGGTACATGTCCGCTTATGATGATGAGGATTTCCTTTGA

Protein

MLIAIAFLFVAIWTGGSYGADYATACARSGRSHRGRMPQVAPCDLSKHNYCTAPGTSYPWNAIRRFVRENQGLMKRMYGEERHISILKSELENYIEDDYEEPLLKQSGFAEDIVKAKMMYTKTSQGRAMKDRPYFRPINSEKTKKTENDTLKVKPLEIIENKTIHNDDSNRTESNNDEGLSYKTKLESIANIEINNLDQEIITLEAVIKQSIETNSIYPKSSTDIDAIDEKNTTDISNATSADFINTTDVITDKLEETTESGKDGWNPMNVDTSTLPPTLLFSEHERIKIEKNENKINEKKDEVRVKPQHQEGSRPAVIKLGGANACESTETLTAPFWANSTRGEVLALLNMHPFEQYIHMETCLHERKQMYCREGCRCEQQYRLHRLLAYDPRNECRGIFADWFRFPTCCVCKCYDVPVEFRARSPRILHPQYDEKVKRVIFEDVARDWYMSAYDDEDFL

Uniprot

A0A345VNQ3   H9JH44   G5DCB8   A0A2A4JA93   A0A2W1BUZ9   A0A2H1WBB7   + More
A0A212FA30   A0A2A4J8S7   A0A0L7LGW4   A0A194Q2H4   A0A0N1I5U4   A0A0A7DQP7   A0A1S4K5L4   A0A1Q3G407   A0A2J7Q929   A0A1W7R7I8   A0A067RJS2   B4N7D8   A0A2A3E901   A0A0T6AZ17   T1KG10   N6TWB3  

Pubmed

19121390    28756777    22118469    26227816    26354079    24845553    + More
17994087    23537049   

EMBL

MG196034    AXJ14419.1    BABH01041043    JN628282    AEP17031.1    NWSH01002406    + More
PCG68360.1    KZ149928    PZC77485.1    ODYU01007519    SOQ50358.1    AGBW02009521    OWR50605.1    PCG68361.1    JTDY01001182    KOB74624.1    KQ459562    KPI99746.1    KQ460968    KPJ10230.1    KF960051    AIW49878.1    GFDL01000507    JAV34538.1    NEVH01016943    PNF25081.1    GEHC01000536    JAV47109.1    KK852428    KDR24057.1    CH964182    EDW80208.2    KZ288347    PBC27541.1    LJIG01022573    KRT79863.1    CAEY01000040    APGK01058730    KB741291    ENN70572.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053268    UP000053240    + More
UP000235965    UP000027135    UP000007798    UP000242457    UP000015104    UP000019118   

PRIDE

H9JH44    G5DCB8   

Pfam

PF16077   Spaetzle

Interpro

IPR032104   Spaetzle        + More
IPR029034   Cystine-knot_cytokine       

SUPFAM

SSF57501   SSF57501       

Gene 3D

2.10.90.10    

ProteinModelPortal

A0A345VNQ3   H9JH44   G5DCB8   A0A2A4JA93   A0A2W1BUZ9   A0A2H1WBB7   + More
A0A212FA30   A0A2A4J8S7   A0A0L7LGW4   A0A194Q2H4   A0A0N1I5U4   A0A0A7DQP7   A0A1S4K5L4   A0A1Q3G407   A0A2J7Q929   A0A1W7R7I8   A0A067RJS2   B4N7D8   A0A2A3E901   A0A0T6AZ17   T1KG10   N6TWB3  

KEGG

100862792    no KO assigned | (RefSeq) spatzle-like protein

GO

GO:0016021  

SignalP

Position:   1 - 19,         Likelihood:  0.995950

 

 

Length:

461

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.78833

Exp number, first 60 AAs:

5.78816

Total prob of N-in:

0.25446

outside

1  -  461

 

 

Pi

219.659317

Theta

172.588362

Tajima's D

1.133912

CLR

0.041652

CSRT

0.702314884255787

Interpretation

Uncertain