Silkworm Genome Informatics Database

Gene

KWMTBOMO01566

Annotation

hypothetical_protein_RR46_04723_[Papilio_xuthus]

Location

Bomo_Chr3(+):14032810-14045193 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.647

CDS

ATGAATGAGTCTAGCGGGCAAACATTCCAGAGGCGGCTGGATTCCGAAAACCAAGCGCCGAATAACCCACTAACCGACAAAAAGGAGAACAGGCGCGCTCTAAAACACACTAGGACGATATCGTTGCCGAGCGGCTGTCCGTTATTCCAAGAGCCGCCGAAGATCGCGCACGAGAGGACTCGGTCCGAGCCCTTGACGGGGGACGAAGTCGATAGAGTGATCCTAGAGAAGGCCGTCTCGCACTCTTCCTTTAAAGCGATCAATGGAAGTGACGCGCCGCTGAAGAAAACGCAGTGGTCGCGCCGGGCCAGTACCGGCACGGGCTCGCGACTGCCGAAGCTGTCGCCGGCGCACACCAAGAACTCGACGACATTGCGGAGTCGCTGCGACAGTATGCCGGCCCGTGCCTGCTCCGCGCTCGACGTGGAGCGGCCCCCGCCCAGGCACTGCGATCTCGACGGTTTAGATATAGGCAGAGACGAGGTGGAGGGCACCGAGTGGTTGAGAACTCCTCGCATCCCCGAGGAACCAGATCCCTGTGACATGTCCAAAGACTTCATGCATTGGCACGGTCGGAGCACGGAGGAGAGTCACGCGGTGGACGGGTACCTGCCGATGACCCCGGGCCACGACCTGCTGGCCGGGCTGGTCTCTGCGTCCAGCGGATCTGTATGCAGCGGTACTCCTTCTACGGATCCTAGGTTCAGCGAGTACCAGCTGGAGCCGGCGACGTCCCACATCGGCGTGGAGAGCCGCCCCCCGCGCGCCTACAGCGTGGGCTCCCGGCCCGCGCGCACAGCCCCCACCGAGCCGCGCCACCGCGCCTACAGCGCCGGCTCCAGCGCGCGCCACCGCTCGCACGCCGCGCACCCCGCGCTGCCCCGGGCCTCCGCCGAGGACCTCATGGAGCTCGACTTCTCCAACAACTCGCCCTCGAACAAGTCGTCGCTGCCGCACAGCCCGCCGCCCGGCGCCGCGGCCCGCCAGCGCAACACCGACGAGTACGTGGACATGTCCCCGCGCAACGCCGGCTACGTCGAGATGAAGCCCGCCACCGACGGCTACGTGGAGATGCACGCCAGCCTCCGCGCCGGCTCCGCCACGCTCTTCCCGCTCGAGCTGGACCCCGCCGACGGCCTGGGCCCGCTCCGGGAGCTGTCCGAGGAGGCCCGCCCGCCGCCCGAGCCGCACTACGTCTCGCTCGCCAACAGGACGCACGACGACGCCGCACGAGGTCAGGCACTCTTTAACCTAAACTTGCAATCATCATGCATTTATGCCAATCGTATAAATATAATCCCTGAATCTATAGAAATCAAATTAAGCGTATTAATATGA

Protein

MNESSGQTFQRRLDSENQAPNNPLTDKKENRRALKHTRTISLPSGCPLFQEPPKIAHERTRSEPLTGDEVDRVILEKAVSHSSFKAINGSDAPLKKTQWSRRASTGTGSRLPKLSPAHTKNSTTLRSRCDSMPARACSALDVERPPPRHCDLDGLDIGRDEVEGTEWLRTPRIPEEPDPCDMSKDFMHWHGRSTEESHAVDGYLPMTPGHDLLAGLVSASSGSVCSGTPSTDPRFSEYQLEPATSHIGVESRPPRAYSVGSRPARTAPTEPRHRAYSAGSSARHRSHAAHPALPRASAEDLMELDFSNNSPSNKSSLPHSPPPGAAARQRNTDEYVDMSPRNAGYVEMKPATDGYVEMHASLRAGSATLFPLELDPADGLGPLRELSEEARPPPEPHYVSLANRTHDDAARGQALFNLNLQSSCIYANRINIIPESIEIKLSVLI

Uniprot

A0A2H1WBC4 A0A2W1C087 A0A194Q410 A0A2A4J9B8 A0A2A4J8A7 A0A2A4J8E7 + More
A0A139WDD0

Pubmed

28756777 26354079 18362917 19820115

EMBL

ODYU01007519 SOQ50360.1 KZ149928 PZC77483.1 KQ459562 KPI99749.1 + More
NWSH01002406 PCG68356.1 PCG68357.1 PCG68355.1 KQ971358 KYB25978.1

Proteomes

UP000053268 UP000218220 UP000007266

Pfam

PF02174 IRS + More
PF00169 PH

Interpro

IPR039011   IRS        + More
IPR002404   IRS_PTB
IPR011993   PH-like_dom_sf
IPR001849   PH_domain

Gene 3D

2.30.29.30

CDD

cd01204 PTB_IRS

ProteinModelPortal

A0A2H1WBC4 A0A2W1C087 A0A194Q410 A0A2A4J9B8 A0A2A4J8A7 A0A2A4J8E7 + More
A0A139WDD0

KEGG

105841831 no KO assigned | (RefSeq) uncharacterized LOC105841831

GO

GO:0005158 GO:0008286 GO:0005886 GO:0005829 GO:0043548

PANTHER

PTHR10614

Length:

445

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00433

outside

1 - 445

Pi

331.235044

Theta

215.807098

Tajima's D

1.660136

CLR

0.22219

CSRT

0.822458877056147

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics