Gene

KWMTBOMO01562

Annotation

PREDICTED:_uncharacterized_protein_LOC106122315_[Papilio_xuthus]

Location

Bomo_Chr3(-):13936517-13937615      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.556

CDS

ATGGTGGAGGTTGCTACTAGGGAAAGTAGAATGACGGTACGAGTTGGCGCTTCTCTCACTGATGAGTTTGACGTTGTGACTGGACTCAGGCAGGGGGACGCTCTGTCACCAATGCTGTTCAACCTGGCACTTGAACACGCCATACGGAAAGTGAACACACTTAGTGGCGGAGTGTGGCTCAACGGACAGCATAGGGTGATAGGATATGCCGATGACCTCGCTCTACTTGGAGAAAGAAAGCAGCACGTTATAGACGCACTCAACTGCCTCCAACAAGAAGCCTCTCGGATTGGCCTTCGCGTGAGCCACGAGAAGACAGAATATCTTCACATGCGTCGATATAAAAACGTAAGACGGAAGCGAGAAGACCTAGTGGTGGGAAATACGAGGTTCAAAGGAGTGGCTAAATTCCGGTACCTTGGCTGCACTGTAACAGACACCAATGACAGGGAAGATGAAATCGAAATTCGTATACAAAATACCCTACGATGCAGTGCAGCCCTACACCCGGTTCTCTCTTCGAAGCTACTAAGCAGGCGCACCAAGATTCGGATATACAAGACTCTAGTCAGACCGATCCTATTGTATGGATGCGAAGCATGGACGCTCACACAGAAAGAAGAGGCAAAACTTCTCGTGACGGAGCGAAAGGTATTGAGAAAAATACTAGGACCAGTTCGGAAAGAAGACGGTTCTTGGCACGTCCGGAAAAATAAGGATGTGGAGAGGCTTTTTGGTGAGCCAAATATTCTGGGGGAGATGAAGGCACGGAGGCTCGGATGGCTCGGACATGTAGTACGTATGGAGCAGGATCGGGCTGTGAAACGGGTGTACACGGGTGTACCGGAGGGACGCCGCCCCGTAGGGAGGCCCAAGTACCGCTGGTGTGACGCTGTGGAAGGAGATTTACGGGAGCTCCAAGTGTCGGACTGGCAAGGTGTTGCGCAGCGCCGGGATGAATGGCAAAGTTTATTGTCGGAGGCCAAGACCCACTTCGGGGTCATAGCGCCAGCTCAGTAG

Protein

MVEVATRESRMTVRVGASLTDEFDVVTGLRQGDALSPMLFNLALEHAIRKVNTLSGGVWLNGQHRVIGYADDLALLGERKQHVIDALNCLQQEASRIGLRVSHEKTEYLHMRRYKNVRRKREDLVVGNTRFKGVAKFRYLGCTVTDTNDREDEIEIRIQNTLRCSAALHPVLSSKLLSRRTKIRIYKTLVRPILLYGCEAWTLTQKEEAKLLVTERKVLRKILGPVRKEDGSWHVRKNKDVERLFGEPNILGEMKARRLGWLGHVVRMEQDRAVKRVYTGVPEGRRPVGRPKYRWCDAVEGDLRELQVSDWQGVAQRRDEWQSLLSEAKTHFGVIAPAQ

Uniprot

A0A2P8YLJ1   A0A1B6JBJ4   A0A2P8ZET0   A0A2P8YPE1   A0A2P8YYC9   A0A2P8YFW0   + More
A0A060Q6A2   A0A2P8ZIH1   A0A2P8ZFZ0   A0A2P8Z488   A0A2P8ZGH9   A0A2P8XT91   A0A2P8YWA2   A0A2P8ZLT6   A0A2P8Z313   A0A2P8Y2S1   A0A2P8Y7F0   A0A2S2PIT5   A0A2P8XC08   A0A2P8ZEA9   A0A2S2N711   A0A1B0DRK3   A0A2S2N6G4   A0A2P8YLY7   A0A2S2PCU1   A0A2P8YTB7   A0A023EZ68   A0A2P8YHZ7   A0A023F0M0   D7F170   A0A0A9Y0T5   A0A023F0H0   A0A367YPS2   A0A3N0CRI3   A0A0K8TRS6   K7JQB0   A0A146KNZ7   A0A0K8TJE5   A0A2P8ZCA4   A0A1B6G8C4   A0A2S2P3U1   A0A1B6I2W4   J9L287   A0A0U4HM41   A0A2S2NQ16   A0A2M4BN64   A0A2P8YGI5   J9L521   A0A2P8XR21   A0A069DWW0   A0A0K8S3X2   A0A0V0G616   A0A2P8ZAY7   A0A023F0F3   A0A2P8XUN2   A0A2M4A6U1   A0A034V1D7   A0A0V0G8V1   J9LEU9   A0A0N8NYW2   J9KUA2   J9LBF3   A0A2P8ZCD0   A0A2M4A3Z2   A0A2M4A3Y0   A0A3L8DXX9   A0A0J7KMY2   X1X8T7   A0A0K8SN56   A0A0N8P264   A0A2M4A809   X1XN59   A0A2M4ACI4   A0A2M4A2X8   A0A2M4A3H0   A0A2M4CRR0   A0A0P8Y4M6   A0A1B6HD49   A0A2S2PT92   A0A2M4CRT4   J9KHI9   A0A2S2P2F5   A0A0N8NZU6   A0A0P8Y6K1   A0A0P8ZWR4   J9KNQ8   A0A2L2YD33   A0A0P9A604   A0A2J7QCQ8   A0A2P8Z3H5   J9LFP1   A0A0P8Y5F3   A0A0E4GBH7   A0A3L8DEM2   A0A023EZ18   A0A2L2YFD0   A0A2P8XEE3   J9KVU6   A0A0B4GMM2   A0A2P8Z0K7  

Pubmed

29403074    25474469    20470440    25401762    26369729    20075255    + More
26823975    25527032    26334808    25348373    17994087    30249741    26561354    25368161   

EMBL

PYGN01000510    PSN45119.1    GECU01011157    JAS96549.1    PYGN01000078    PSN55011.1    + More
PYGN01000451    PSN46127.1    PYGN01000287    PSN49259.1    PYGN01000629    PSN43121.1    HE799691    CCH14900.1    PYGN01000047    PSN56294.1    PYGN01000070    PSN55417.1    PYGN01000203    PSN51319.1    PYGN01000064    PSN55609.1    PYGN01001382    PSN35227.1    PYGN01000324    PSN48495.1    PYGN01000020    PSN57453.1    PYGN01000219    PSN50892.1    PYGN01001004    PSN38555.1    PYGN01000836    PSN40188.1    GGMR01016675    MBY29294.1    PYGN01003402    PSN29545.1    PYGN01000082    PSN54842.1    GGMR01000301    MBY12920.1    AJVK01001578    GGMR01000126    MBY12745.1    PYGN01000502    PSN45243.1    GGMR01014652    MBY27271.1    PYGN01000372    PSN47498.1    GBBI01004199    JAC14513.1    PYGN01000580    PSN43876.1    GBBI01004198    JAC14514.1    FJ265555    ADI61823.1    GBHO01016952    JAG26652.1    GBBI01004263    JAC14449.1    QOUI01000020    RCK67885.1    RAPH01000014    RNL66055.1    GDAI01000742    JAI16861.1    AAZX01023614    GDHC01021627    JAP97001.1    GBRD01000202    JAG65619.1    PYGN01000107    PSN54137.1    GECZ01011079    JAS58690.1    GGMR01011466    MBY24085.1    GECU01026439    JAS81267.1    ABLF02027703    ABLF02061609    KU311054    ALX81665.1    GGMR01006433    MBY19052.1    GGFJ01005240    MBW54381.1    PYGN01000613    PSN43351.1    ABLF02009558    ABLF02041313    ABLF02057180    PYGN01001494    PSN34463.1    GBGD01000331    JAC88558.1    GBRD01017846    JAG47981.1    GECL01002632    JAP03492.1    PYGN01000119    PSN53667.1    GBBI01004261    JAC14451.1    PYGN01001321    PSN35706.1    GGFK01003183    MBW36504.1    GAKP01022638    GAKP01022636    GAKP01022635    JAC36314.1    GECL01001585    JAP04539.1    ABLF02019049    ABLF02067155    CH902961    KPU72636.1    ABLF02026145    ABLF02026146    ABLF02042729    ABLF02003877    ABLF02042991    PYGN01000106    PSN54154.1    GGFK01002196    MBW35517.1    GGFK01002192    MBW35513.1    QOIP01000003    RLU25142.1    LBMM01005351    KMQ91586.1    ABLF02009557    ABLF02016497    ABLF02041567    ABLF02062088    GBRD01011073    JAG54751.1    CH905131    KPU81852.1    GGFK01003613    MBW36934.1    ABLF02011153    ABLF02057094    GGFK01005184    MBW38505.1    GGFK01001798    MBW35119.1    GGFK01001949    MBW35270.1    GGFL01003846    MBW68024.1    CH902619    KPU76535.1    GECU01035086    JAS72620.1    GGMR01020071    MBY32690.1    GGFL01003845    MBW68023.1    ABLF02019047    GGMR01010991    MBY23610.1    CH902657    KPU75308.1    CH902653    KPU74858.1    CH902626    KPU79149.1    ABLF02039015    IAAA01017080    LAA06072.1    CH902621    KPU81727.1    NEVH01016288    PNF26362.1    PYGN01000212    PSN51056.1    ABLF02066124    CH904714    KPU81814.1    HACL01000173    CFW94467.1    QOIP01000009    RLU18885.1    GBBI01004262    JAC14450.1    IAAA01017079    LAA06070.1    PYGN01002509    PSN30365.1    ABLF02017398    AZNE01000717    KID80942.1    PYGN01000254    PSN50032.1   

Proteomes

UP000245037    UP000092462    UP000252770    UP000279711    UP000002358    UP000007819    + More
UP000007801    UP000279307    UP000036403    UP000235965    UP000031176   

PRIDE

D7F170   

Pfam

PF00078   RVT_1        + More
PF03372   Exo_endo_phos
PF14529   Exo_endo_phos_2
PF13873   Myb_DNA-bind_5

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000637   HMGI/Y_DNA-bd_CS       
IPR028002   Myb_DNA-bind_5       

SUPFAM

SSF56219   SSF56219       

Gene 3D

3.60.10.10    

ProteinModelPortal

A0A2P8YLJ1   A0A1B6JBJ4   A0A2P8ZET0   A0A2P8YPE1   A0A2P8YYC9   A0A2P8YFW0   + More
A0A060Q6A2   A0A2P8ZIH1   A0A2P8ZFZ0   A0A2P8Z488   A0A2P8ZGH9   A0A2P8XT91   A0A2P8YWA2   A0A2P8ZLT6   A0A2P8Z313   A0A2P8Y2S1   A0A2P8Y7F0   A0A2S2PIT5   A0A2P8XC08   A0A2P8ZEA9   A0A2S2N711   A0A1B0DRK3   A0A2S2N6G4   A0A2P8YLY7   A0A2S2PCU1   A0A2P8YTB7   A0A023EZ68   A0A2P8YHZ7   A0A023F0M0   D7F170   A0A0A9Y0T5   A0A023F0H0   A0A367YPS2   A0A3N0CRI3   A0A0K8TRS6   K7JQB0   A0A146KNZ7   A0A0K8TJE5   A0A2P8ZCA4   A0A1B6G8C4   A0A2S2P3U1   A0A1B6I2W4   J9L287   A0A0U4HM41   A0A2S2NQ16   A0A2M4BN64   A0A2P8YGI5   J9L521   A0A2P8XR21   A0A069DWW0   A0A0K8S3X2   A0A0V0G616   A0A2P8ZAY7   A0A023F0F3   A0A2P8XUN2   A0A2M4A6U1   A0A034V1D7   A0A0V0G8V1   J9LEU9   A0A0N8NYW2   J9KUA2   J9LBF3   A0A2P8ZCD0   A0A2M4A3Z2   A0A2M4A3Y0   A0A3L8DXX9   A0A0J7KMY2   X1X8T7   A0A0K8SN56   A0A0N8P264   A0A2M4A809   X1XN59   A0A2M4ACI4   A0A2M4A2X8   A0A2M4A3H0   A0A2M4CRR0   A0A0P8Y4M6   A0A1B6HD49   A0A2S2PT92   A0A2M4CRT4   J9KHI9   A0A2S2P2F5   A0A0N8NZU6   A0A0P8Y6K1   A0A0P8ZWR4   J9KNQ8   A0A2L2YD33   A0A0P9A604   A0A2J7QCQ8   A0A2P8Z3H5   J9LFP1   A0A0P8Y5F3   A0A0E4GBH7   A0A3L8DEM2   A0A023EZ18   A0A2L2YFD0   A0A2P8XEE3   J9KVU6   A0A0B4GMM2   A0A2P8Z0K7  

KEGG

101739349    no KO assigned | (RefSeq) uncharacterized LOC101739349

GO

GO:0004519   GO:0003964   GO:0006355   GO:0003723   GO:0006278   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0005515   GO:0003779   GO:0016021  

Length:

339

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02489

Exp number, first 60 AAs:

0.0025

Total prob of N-in:

0.04699

outside

1  -  339

 

 

Pi

299.118527

Theta

147.378558

Tajima's D

2.968487

CLR

1.516019

CSRT

0.976501174941253

Interpretation

Uncertain