Gene

KWMTBOMO01560  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009082

Annotation

PREDICTED:_ommochrome-binding_protein-like_[Bombyx_mori]

Location

Bomo_Chr3(+):13904296-13905272      View in EpiBrowser

Full name

Ommochrome-binding protein      

Alternative Name

YCP

Location in the cell

Cytoplasmic   Reliability : 1.375 Mitochondrial   Reliability : 1.794 Nuclear   Reliability : 1.282

CDS

ATGAAGCTAAATTCACTATTGTGTTTTCTGATCAACATATCCTTGTTACCGGATTCGAAATCCAGCATCAGGTACTGCGATTTCACTACGAATGACCGTTCGAAATATTGCTATGCAAAGGAAATATTGCTCGCGATCACTCACAGCCCGAATCAATTAGCCGTTGATAAATCATCAAACACACTGTATTTTAGTTTCGACATGGGCCAAGGGGATTTCGTTCCTGCTGTATTCAACATGGACAATAAAAAACTAACCGTATTGAATGGCGTTAGGGATGCTTTCGCGTTAGCCAGCGACGACAGCAGTAACATCTATTTCGGAGGGAACAACGGCATATACAGATACGAGAAACAATCTCTAAAACAATTGAACATCAAAAACTTGGACATTTGGTGGCTTTACATACGGAACAATATATATTTTATAAAATTTCCCAATTTGGAAGCACACTACTATAAGAACATGACCGTGAAGGAGTTACCCGAACTCAAAGGGAAGGTAGTGCATCAGTTCGTGTTAGACAAACAAGGTAACGTATTTTTCATAAACGGCTCCGGTCTGTATGGAGTTCGACGCGGAAGACATCGCGATATCATGCTGAGAGACAACCCTAAGTTCGTGGGAATGGCCACGGACAACAACAGCGATGTGTATGTTTGCAGCGAAGACGGTATATACGTCGTCAGCAAGATGGTGATAAAGGTTAAAAAAATCGTGAACGTTCAAGGCGTACTGGGACTCACATTCGACAAACTGAACAACATCGTGTACACGAACGCGTATGAGATAGTTCGTCTTGTGCCGATGACTAGAAAAAGATCTTTATTTAGCTTTGTATAA

Protein

MKLNSLLCFLINISLLPDSKSSIRYCDFTTNDRSKYCYAKEILLAITHSPNQLAVDKSSNTLYFSFDMGQGDFVPAVFNMDNKKLTVLNGVRDAFALASDDSSNIYFGGNNGIYRYEKQSLKQLNIKNLDIWWLYIRNNIYFIKFPNLEAHYYKNMTVKELPELKGKVVHQFVLDKQGNVFFINGSGLYGVRRGRHRDIMLRDNPKFVGMATDNNSDVYVCSEDGIYVVSKMVIKVKKIVNVQGVLGLTFDKLNNIVYTNAYEIVRLVPMTRKRSLFSFV

Subunit

Monomer.

Keywords

Direct protein sequencing   Glycoprotein   Signal  

Feature

chain  Ommochrome-binding protein

Uniprot

H9JHT4   A0A2A4JHI0   A0A2H1VWR3   A0A2W1BW95   A0A194Q2I5   A0A0N1IBR9   + More
A0A0L7L3P1   H9JF82   A0A212EMS2   A0A2A4K3H5   A0A2H1X0B0   A0A0L7L3N6   A0A212FKW6   A0A0N1PJI9   A0A212F0W5   A0A212FC69   A0A0L7L5A1   A0A2W1BAP6   A0A194PKB7   A0A194R7A2   A0A0N1IJL9   A0A2A4JCK0   H9JMK0   A0A0L7LDZ5   A0A194Q763   A0A0N0PCV6   A0A194Q748   A0A1E1WDT9   A9NPD0   A0A2A4K6L9   A0A212EMV3   H9JDD0   A0A0N0PE93   A0A212EJ06   Q5PY91   A0A2W1BID2   H9BE66   Q5PY92   Q9NDA4   Q5PY93   P31420   A0A2W1BWL3   H9JCP0   A0A0N1PGN6   H9JF79   A0A194Q899   H9JIL3   A0A212EMS6   A0A194QCP3   A0A345DSU4   A0A194REA4   A0A0L7KVE0   A0A2S8NSW1  

Pubmed

19121390    28756777    26354079    26227816    22118469    18854048    + More
16341251    8428907    1939173   

EMBL

BABH01029428    NWSH01001435    PCG71236.1    ODYU01004895    SOQ45238.1    KZ149928    + More
PZC77477.1    KQ459562    KPI99756.1    KQ461158    KPJ08078.1    JTDY01003234    KOB69909.1    BABH01026891    AGBW02013802    OWR42795.1    NWSH01000191    PCG78576.1    ODYU01012396    SOQ58682.1    JTDY01003236    KOB69904.1    AGBW02007955    OWR54376.1    KQ460423    KPJ14832.1    AGBW02011018    OWR47363.1    AGBW02009212    OWR51334.1    JTDY01002898    KOB70521.1    KZ150180    PZC72519.1    KQ459602    KPI93453.1    KQ460615    KPJ13703.1    KQ459895    KPJ19520.1    NWSH01001998    PCG69476.1    BABH01016630    JTDY01001487    KOB73748.1    KQ459386    KPJ01224.1    KPJ14850.1    KPJ01209.1    GDQN01005929    JAT85125.1    EF083140    ABK22491.1    NWSH01000114    PCG79413.1    OWR42797.1    BABH01030111    KPJ19519.1    AGBW02014547    OWR41451.1    AY819655    AAV68388.1    PZC72520.1    JQ003184    AFC35301.1    AY819654    AAV68387.1    AF169311    AAF89672.1    AY819653    AAV68386.1    L00975    KZ149968    PZC76133.1    BABH01034622    KPJ14845.1    BABH01026888    KPJ01215.1    BABH01027103    OWR42794.1    KPJ01211.1    CP031090    AXF97285.1    KQ460297    KPJ16163.1    JTDY01005429    KOB67004.1    PUUH01000062    PQP79050.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007151    + More
UP000253689    UP000238122   

PRIDE

H9JHT4    H9JF82    H9JMK0    H9JDD0    H9JCP0    H9JF79    + More
H9JIL3   

Pfam

PF07690   MFS_1        + More
PF02995   DUF229
PF00096   zf-C2H2
PF07494   Reg_prop

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011042   6-blade_b-propeller_TolB-like       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR017850   Alkaline_phosphatase_core_sf       
IPR004245   DUF229       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR036574   Scorpion_toxin-like_sf       
IPR011110   Reg_prop       

SUPFAM

SSF103473   SSF103473        + More
SSF50998   SSF50998       
SSF53649   SSF53649       
SSF57667   SSF57667       
SSF57095   SSF57095       

Gene 3D

2.130.10.10     2.120.10.30     3.40.720.10     3.30.30.10    

CDD

cd06174  MFS
cd16021  ALP_like

ProteinModelPortal

H9JHT4   A0A2A4JHI0   A0A2H1VWR3   A0A2W1BW95   A0A194Q2I5   A0A0N1IBR9   + More
A0A0L7L3P1   H9JF82   A0A212EMS2   A0A2A4K3H5   A0A2H1X0B0   A0A0L7L3N6   A0A212FKW6   A0A0N1PJI9   A0A212F0W5   A0A212FC69   A0A0L7L5A1   A0A2W1BAP6   A0A194PKB7   A0A194R7A2   A0A0N1IJL9   A0A2A4JCK0   H9JMK0   A0A0L7LDZ5   A0A194Q763   A0A0N0PCV6   A0A194Q748   A0A1E1WDT9   A9NPD0   A0A2A4K6L9   A0A212EMV3   H9JDD0   A0A0N0PE93   A0A212EJ06   Q5PY91   A0A2W1BID2   H9BE66   Q5PY92   Q9NDA4   Q5PY93   P31420   A0A2W1BWL3   H9JCP0   A0A0N1PGN6   H9JF79   A0A194Q899   H9JIL3   A0A212EMS6   A0A194QCP3   A0A345DSU4   A0A194REA4   A0A0L7KVE0   A0A2S8NSW1  

KEGG

101745371    no KO assigned | (RefSeq) ommochrome-binding protein-like

GO

GO:0016021   GO:0055085   GO:0005215   GO:0003824   GO:0000981   GO:0003676   GO:0040034   GO:0005515  

PANTHER

PTHR10974  

SignalP

Position:   1 - 21,         Likelihood:  0.978183

 

 

Length:

280

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0366

Exp number, first 60 AAs:

0.00075

Total prob of N-in:

0.00622

outside

1  -  280

 

 

Pi

248.298137

Theta

171.920356

Tajima's D

1.487336

CLR

2.74101

CSRT

0.790010499475026

Interpretation

Uncertain