SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01556
Pre Gene Modal
BGIBMGA009079
Annotation
PREDICTED:_uncharacterized_protein_LOC105841377_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.457
 

Sequence

CDS
ATGAGAATCGAACCCACGACGTTCAGCTCAGCAGTAAGCTACTACGCTGTTCGCTTAACCTTGATAAAGAGTACCACACAACCATCTAGGCTAGGTTGCGGAGCCATCTATCCTCAGGCGCGGTCAAAGCTTCCTAAGAAACGGAGGCGAGTGCTACCAGTTGAACAGCCTCGAAGGAAACGCGACGCCAGCGCCTCCAATCGACGCGTCAATGCTGTAAAACACCCGGTCGTAATCAAGGAGTTTTCGCCGGGAGCTAATAAATTTGGTGTGAATGGAATGAACATGATCAGTCTGGCTCTACAGGGTCCACCAAACCTCCTGCGGCCACCTTCGACCCAGCCACTCCAAGCTAGGGCTCCTATTGTTGAAAGTCCTATCATTCACACACAATCGGGGGCGATATCGTTGGCGTCTCTGCAACCGCCTCTCCTGACCGCACCGCCCCTGCAACCACGCCCTGCAACCACCGGCTCCTTAGACCTCATGCTGCCGCTACAACCGAAACTACTTCCAGGCTACAACCTGCAGTCTTCGTATCTCTCGAACACACTGTCGACAGTTCGACCGCCAGATTTCGATAAAGAAAAAGAGTTCAAACCGAAAGTAGAGATAATAGTTGAGAAAGTAGAGTCGATCGATAGTGACAGTAGAGACAGTGAAAATAATTGTGTCGATAGTGTTTGTAAGGACGAAGTCAATAATGTTATTGATAGTAGAACGACGAATAATTACAGAGATAACGAGAATAGTCCTAATAATAATTCATAA
Protein
MRIEPTTFSSAVSYYAVRLTLIKSTTQPSRLGCGAIYPQARSKLPKKRRRVLPVEQPRRKRDASASNRRVNAVKHPVVIKEFSPGANKFGVNGMNMISLALQGPPNLLRPPSTQPLQARAPIVESPIIHTQSGAISLASLQPPLLTAPPLQPRPATTGSLDLMLPLQPKLLPGYNLQSSYLSNTLSTVRPPDFDKEKEFKPKVEIIVEKVESIDSDSRDSENNCVDSVCKDEVNNVIDSRTTNNYRDNENSPNNNS

Summary

Similarity
Belongs to the potassium channel family.
Pfam
PF00520   Ion_trans
Interpro
IPR003968   K_chnl_volt-dep_Kv        + More
IPR015572   Shaw_inv       
IPR028325   VG_K_chnl       
IPR005821   Ion_trans_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR027359   Volt_channel_dom_sf       
IPR003974   K_chnl_volt-dep_Kv3       
SUPFAM
SSF54695   SSF54695       
Gene 3D

Ontologies

Topology

Length:
256
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01852
Exp number, first 60 AAs:
0.01702
Total prob of N-in:
0.03580
outside
1  -  256
 
 

Population Genetic Test Statistics

Pi
300.781959
Theta
181.918019
Tajima's D
2.372433
CLR
0.122784
CSRT
0.932303384830758
Interpretation
Uncertain
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