Gene

KWMTBOMO01555

Pre Gene Modal

BGIBMGA009078

Annotation

PREDICTED:_potassium_voltage-gated_channel_protein_Shaw-like_[Bombyx_mori]

Location

Bomo_Chr3(+):13590986-13634770      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.251

CDS

ATGGATGTCGTGGTAGAGCTAACAATAGTTAGACAGTACGTTGATAAAGCAGAGATTTTGGAGTTTATCTCTATCATCAAGATCCTGAGGCTGTTCAAGCTGACCAGACACAGTCCAGGGCTGAAGATCTTGGTGCACACCTTCAAGGCGTCAGCAAAGGAACTGACGCTGTTAGTGTTTTTTCTGGTCCTCGGAATCGTGATCTTCGCGAGCTTGGTGTACTACGCTGAGAAATCGCAGGATAACCCAGAGAACCAGTTTAAATCTATACCCCTCGGTCTTTGGTGGGCGATCGTCACGATGACCACTGTCGGGTATGGAGATATGGCGCCCAAGACTTACCTCGGGATGTTTGTGGGCGCTCTCTGCGCCTTGGCTGGAGTGCTCACTATCGCGCTGCCCGTTCCCGTGATAGTATCCAACTTCTCCATGTTCTACTCCCATACTCAGGCAAGTGGATAG

Protein

MDVVVELTIVRQYVDKAEILEFISIIKILRLFKLTRHSPGLKILVHTFKASAKELTLLVFFLVLGIVIFASLVYYAEKSQDNPENQFKSIPLGLWWAIVTMTTVGYGDMAPKTYLGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQASG

Similarity

Belongs to the potassium channel family.

Uniprot

A0A2W1C080   A0A194Q339   A0A0N0PCM8   A0A2S2NNR1   A0A182KDV1   A0A2S2Q878   + More
A0A0A9Y0S3   A0A0A9Y3U7   A0A0T6BEL8   A0A0P5GGB7   A0A0P5KSL0   A0A0P5FU90   A0A0P4Y7U0   A0A182JLR5   A0A0P5RN71   A0A0P5BJ70   A0A0P5G9Y4   E9G6G5   A0A182L169   A0A0P6ELD9   A0A0P6CNE0   A0A0P6FHY7   A0A0P5VYS4   A0A0P5PSS9   A0A2S2Q771   A0A2J7RQK8   A0A0P5BSD2   A0A1B0D0Z9   A0A0P5MTL3   A0A0P5WJQ2   A0A2H8TU10   J9KBA4   A0A0P5CVD5   A0A0P5YDY4   A0A0P6FFB6   A0A1B6JVD2   A0A067RPK6   A0A0P5PD88   A0A0P4YND9   A0A0P4Z2A9   A0A0P5L222   A0A0P6JTA4   A0A0P6G807   E9G2I2   A0A182PPR6   A0A0P4Z728   A0A182HUF7   A0A182XKZ8   A0A182SFK4   A0A0P5ARG3   A0A0N7ZJ77   E9J3X3   Q7PJ62   A0A182L172   A0A0P4X5J6   A0A0P5M6G9   A0A0P5MM19   A0A0P5PAC5   T1G8N9   A0A182R4S3   A0A1Y1MBB0   A0A0P5ABL6   U4TY14   A0A0P5H9G8   A0A0P6IH24   A0A084VN64   A0A023GDU2   A0A1S4GXL1   A0A0N8CYR5   A0A182Y3M5   A0A0P5TWV6   A0A0N8AFK0   A0A0P5N395   A0A336KTB5   A0A182F5V3   A0A1Y3AWI0   A0A0P6CAE6   A0A0P6GJM9   A0A0P5YJA6   A0A0N8CCA5   N6U4K5   A0A0P5ZEA9   A0A0P5Z2I1   A0A0P5XHT2   A0A2Y9D1K8   A0A0P6IC74   A0A023FQ08   A0A182M9X6   A0A2P8ZHZ7   A0A087T9Q1   A0A2T7PGE8   A0A182F5U9   A0A182K7C2   A0A0P5R5I5   A0A182PPR2   T1KJ18   A0A1E1X451   A0A2A4JJ74   A0A182XKZ3   A0A2A4JKU0  

Pubmed

28756777    26354079    25401762    21292972    20966253    24845553    + More
21282665    12364791    23254933    28004739    23537049    24438588    25244985    29403074    28503490   

EMBL

KZ149928    PZC77473.1    KQ459562    KPI99758.1    KQ460636    KPJ13360.1    + More
GGMR01006175    MBY18794.1    GGMS01004721    MBY73924.1    GBHO01017815    JAG25789.1    GBHO01017816    JAG25788.1    LJIG01001161    KRT85779.1    GDIQ01248423    JAK03302.1    GDIQ01205639    JAK46086.1    GDIQ01249975    JAK01750.1    GDIP01232326    JAI91075.1    GDIQ01107418    GDIP01059485    JAL44308.1    JAM44230.1    GDIP01183816    JAJ39586.1    GDIQ01251468    JAK00257.1    GL732533    EFX84931.1    GDIQ01068031    JAN26706.1    GDIQ01089024    JAN05713.1    GDIQ01049952    JAN44785.1    GDIP01094347    JAM09368.1    GDIQ01144903    JAL06823.1    GGMS01004371    MBY73574.1    NEVH01001335    PNF43116.1    GDIP01185110    JAJ38292.1    AJVK01021811    GDIQ01174096    JAK77629.1    GDIQ01112920    GDIP01085480    LRGB01002384    JAL38806.1    JAM18235.1    KZS07935.1    GFXV01005625    MBW17430.1    ABLF02040673    ABLF02040674    ABLF02040675    ABLF02040682    ABLF02040683    ABLF02040686    ABLF02040688    ABLF02040693    GDIP01165885    JAJ57517.1    GDIP01073234    JAM30481.1    GDIQ01048466    JAN46271.1    GECU01004560    JAT03147.1    KK852544    KDR21624.1    GDIQ01139812    JAL11914.1    GDIP01226307    JAI97094.1    GDIP01220166    JAJ03236.1    GDIQ01176393    JAK75332.1    GDIQ01009264    JAN85473.1    GDIQ01048465    JAN46272.1    GL732530    EFX86305.1    GDIP01218581    JAJ04821.1    APCN01002460    GDIP01199931    JAJ23471.1    GDIP01240121    JAI83280.1    GL768069    EFZ12524.1    AAAB01008964    EAA43883.4    GDIP01247494    JAI75907.1    GDIQ01160111    JAK91614.1    GDIQ01161666    JAK90059.1    GDIQ01137465    JAL14261.1    AMQM01010917    KB095994    ESO09179.1    GEZM01035706    GEZM01035705    JAV83119.1    GDIP01204709    JAJ18693.1    KB631741    ERL85707.1    GDIQ01230623    JAK21102.1    GDIQ01031170    JAN63567.1    ATLV01014699    KE524979    KFB39408.1    GBBM01003409    JAC32009.1    GDIP01085727    LRGB01000996    JAM17988.1    KZS14237.1    GDIP01123316    JAL80398.1    GDIP01152337    JAJ71065.1    GDIQ01151868    JAK99857.1    UFQS01000998    UFQT01000998    SSX08358.1    SSX28381.1    MUJZ01057625    OTF72154.1    GDIP01004968    JAM98747.1    GDIQ01032400    JAN62337.1    GDIP01070884    JAM32831.1    GDIQ01093819    JAL57907.1    APGK01040046    APGK01040047    APGK01040048    APGK01040049    APGK01040050    KB740975    ENN76525.1    GDIP01044930    JAM58785.1    GDIP01063003    JAM40712.1    GDIP01072181    JAM31534.1    GDIQ01006671    JAN88066.1    GBBK01001567    JAC22915.1    AXCM01017532    PYGN01000051    PSN56128.1    KK114184    KFM61840.1    PZQS01000004    PVD32493.1    GDIQ01107425    JAL44301.1    CAEY01000116    GFAC01005164    JAT94024.1    NWSH01001233    PCG72021.1    PCG72022.1   

Proteomes

UP000053268    UP000053240    UP000075881    UP000075880    UP000000305    UP000075882    + More
UP000235965    UP000092462    UP000076858    UP000007819    UP000027135    UP000075885    UP000075840    UP000076407    UP000075901    UP000007062    UP000015101    UP000075900    UP000030742    UP000030765    UP000076408    UP000069272    UP000019118    UP000075884    UP000075883    UP000245037    UP000054359    UP000245119    UP000015104    UP000218220   

Pfam

PF00520   Ion_trans        + More
PF02214   BTB_2
PF17906   HTH_48

Interpro

IPR003968   K_chnl_volt-dep_Kv        + More
IPR015572   Shaw_inv       
IPR028325   VG_K_chnl       
IPR005821   Ion_trans_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR027359   Volt_channel_dom_sf       
IPR003974   K_chnl_volt-dep_Kv3       
IPR003131   T1-type_BTB       
IPR000210   BTB/POZ_dom       
IPR041426   Mos1_HTH       

SUPFAM

SSF54695   SSF54695       

Gene 3D

1.20.120.350    

ProteinModelPortal

A0A2W1C080   A0A194Q339   A0A0N0PCM8   A0A2S2NNR1   A0A182KDV1   A0A2S2Q878   + More
A0A0A9Y0S3   A0A0A9Y3U7   A0A0T6BEL8   A0A0P5GGB7   A0A0P5KSL0   A0A0P5FU90   A0A0P4Y7U0   A0A182JLR5   A0A0P5RN71   A0A0P5BJ70   A0A0P5G9Y4   E9G6G5   A0A182L169   A0A0P6ELD9   A0A0P6CNE0   A0A0P6FHY7   A0A0P5VYS4   A0A0P5PSS9   A0A2S2Q771   A0A2J7RQK8   A0A0P5BSD2   A0A1B0D0Z9   A0A0P5MTL3   A0A0P5WJQ2   A0A2H8TU10   J9KBA4   A0A0P5CVD5   A0A0P5YDY4   A0A0P6FFB6   A0A1B6JVD2   A0A067RPK6   A0A0P5PD88   A0A0P4YND9   A0A0P4Z2A9   A0A0P5L222   A0A0P6JTA4   A0A0P6G807   E9G2I2   A0A182PPR6   A0A0P4Z728   A0A182HUF7   A0A182XKZ8   A0A182SFK4   A0A0P5ARG3   A0A0N7ZJ77   E9J3X3   Q7PJ62   A0A182L172   A0A0P4X5J6   A0A0P5M6G9   A0A0P5MM19   A0A0P5PAC5   T1G8N9   A0A182R4S3   A0A1Y1MBB0   A0A0P5ABL6   U4TY14   A0A0P5H9G8   A0A0P6IH24   A0A084VN64   A0A023GDU2   A0A1S4GXL1   A0A0N8CYR5   A0A182Y3M5   A0A0P5TWV6   A0A0N8AFK0   A0A0P5N395   A0A336KTB5   A0A182F5V3   A0A1Y3AWI0   A0A0P6CAE6   A0A0P6GJM9   A0A0P5YJA6   A0A0N8CCA5   N6U4K5   A0A0P5ZEA9   A0A0P5Z2I1   A0A0P5XHT2   A0A2Y9D1K8   A0A0P6IC74   A0A023FQ08   A0A182M9X6   A0A2P8ZHZ7   A0A087T9Q1   A0A2T7PGE8   A0A182F5U9   A0A182K7C2   A0A0P5R5I5   A0A182PPR2   T1KJ18   A0A1E1X451   A0A2A4JJ74   A0A182XKZ3   A0A2A4JKU0  

PDB

6EBM     E-value=4.32885e-35,     Score=365

KEGG

101745659    no KO assigned | (RefSeq) potassium voltage-gated channel protein Shaw-like

GO

GO:0008076   GO:0005249   GO:0034765   GO:0043025   GO:0051260   GO:0016021   GO:0030424   GO:0032590   GO:0005251   GO:0071805   GO:0032809   GO:0006813   GO:0005216   GO:0006811   GO:0016020   GO:0006418   GO:0006334   GO:0003779   GO:0055085  

PANTHER

PTHR11537   PTHR11537:SF257  

Length:

153

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

62.61368

Exp number, first 60 AAs:

5.64378

Total prob of N-in:

0.57234

outside

1  -  54

TMhelix

55  -  77

inside

78  -  89

TMhelix

90  -  107

outside

108  -  116

TMhelix

117  -  139

inside

140  -  153

 

 

Pi

292.773916

Theta

177.901259

Tajima's D

2.538861

CLR

0.244626

CSRT

0.949952502374881

Interpretation

Uncertain