SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01549
Pre Gene Modal
BGIBMGA009089
Annotation
PREDICTED:_protein_Dok-7-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.484
 

Sequence

CDS
ATGAAGCTAAAGAGAACGCGAAATTGCGTTCACCTACAGCTGTACAAGGACCTAAAAGAGAGACAGAAGAACGGGCAGACTAAGGCTTCATTATCCTTGCAGCAGTTTCTTGGATTTGAGTCAGGGTTCACGTTGGACAAGGAATCGAATACCTTGGCGATATTGTGCGAAGACGTCGTCCCAGTATTAGCTTTCGATACTAGAGAGGGATTAATACAATGGAGGGTTAAGGTGCAGCACAATCTTGGCAGCAGTAAAGAGTTTGCCGCGATCCTGATATCATCGCCGCAGACGAACACCCGCGCCGGGCCGGTTCGCCTGCACGTCTGTGGCCCTAAGCTCGCTCTTTGCGGCTCGCGTCCGCCCGAAGTGCTGGCCCTCTGGGACGTAAAACTGCTCAGACGTTACGGCGTCGTCGACAAGCGGTTCTGTGTGGAAGGCGGCTCGCGTTGCGGTAAAGGCGAGGGTCTATTTGTGTTTGCCGCCGAAGCAGGACGCGAGCTGACGGAACTCCTCAACATTTACAGTCACGACGCCCAATCTAGACTCAGCATGGCTTCTAGAAGTGGATCAGTTTCAGAAAAGCGTTTCTCCGACACGAGCTCGTGCATGGACGAGTGCTTCCACCCGTCGATGAGGTCGGTGTCGCCGTCGTGGGCGGGGCCGGCCAGCCAGACCATGCACTGCCTGTCCGACCTGGACTCGAGCGTGGACGGCAACGAGGAGAAGTTCAGAAGGCCCACGTCCTTGCCGCGCTGCTCGAGTTGCATCGGGAAAATCTGTCATTTGACCAGGTACGTTGCCCTCGGCACAATTATCAATAACATTTTCTATAATCAAATGCACAAATAA
Protein
MKLKRTRNCVHLQLYKDLKERQKNGQTKASLSLQQFLGFESGFTLDKESNTLAILCEDVVPVLAFDTREGLIQWRVKVQHNLGSSKEFAAILISSPQTNTRAGPVRLHVCGPKLALCGSRPPEVLALWDVKLLRRYGVVDKRFCVEGGSRCGKGEGLFVFAAEAGRELTELLNIYSHDAQSRLSMASRSGSVSEKRFSDTSSCMDECFHPSMRSVSPSWAGPASQTMHCLSDLDSSVDGNEEKFRRPTSLPRCSSCIGKICHLTRYVALGTIINNIFYNQMHK

Summary

EMBL
NWSH01001919    PCG69682.1    AGBW02013278    OWR43660.1    KQ459562    KPI99761.1    + More
ACPB03021566    ODYU01010691    SOQ55967.1    KZ150047    PZC74484.1    NWSH01000504    PCG75994.1    GBHO01042885    JAG00719.1    GFXV01007684    MBW19489.1    ABLF02040225    ABLF02040231    GBBI01003705    JAC15007.1    GBHO01042886    GBHO01042884    GBRD01018037    JAG00718.1    JAG00720.1    JAG47790.1    GDHC01007463    JAQ11166.1    UFQS01002073    UFQT01002073    SSX13140.1    SSX32579.1    KK852544    KDR21633.1    GBYB01011408    JAG81175.1    GEDC01030412    GEDC01025398    GEDC01024901    JAS06886.1    JAS11900.1    JAS12397.1    GEDC01021617    GEDC01005181    JAS15681.1    JAS32117.1    KQ435745    KOX76614.1    GECU01026919    JAS80787.1    GECU01027199    JAS80507.1    GECU01030184    JAS77522.1    GECU01030162    JAS77544.1    GECU01025954    JAS81752.1    GL449158    EFN83191.1    KQ976396    KYM92987.1    KZ288220    PBC32201.1    GL440682    EFN65571.1    LBMM01004322    KMQ92567.1    ADTU01011952    GL888417    EGI61309.1    KQ978691    KYN29204.1    GEBQ01011582    JAT28395.1    KQ981727    KYN36972.1    APGK01018185    KB740071    ENN81685.1    KQ414582    KOC70817.1    KQ977408    KYN02942.1    GEZM01042337    JAV79931.1    GL764129    EFZ18344.1    LJIG01001801    KRT85139.1    KQ434874    KZC09716.1    KQ971361    KYB25853.1    KB632286    ERL91459.1    CVRI01000034    CRK92655.1    DS235335    EEB14856.1    JTDY01004869    KOB67652.1    ODYU01003612    SOQ42592.1    LNIX01000007    OXA52055.1    PZC74486.1    PCG75992.1    AGBW02009775    OWR49945.1   
Pfam
PF02174   IRS
Interpro
IPR011993   PH-like_dom_sf        + More
IPR037746   Dok-7       
IPR002404   IRS_PTB       
IPR001849   PH_domain       
IPR037747   Dok-7_PH       
Gene 3D
PDB
3ML4     E-value=1.07916e-24,     Score=279

Ontologies

Topology

Length:
283
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.81802
Exp number, first 60 AAs:
0.000910000000000001
Total prob of N-in:
0.36591
outside
1  -  283
 
 

Population Genetic Test Statistics

Pi
208.089143
Theta
151.367032
Tajima's D
1.176161
CLR
0.511647
CSRT
0.710214489275536
Interpretation
Uncertain
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