SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01547
Pre Gene Modal
BGIBMGA009090
Annotation
PREDICTED:_protein_Dok-7-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.797
 

Sequence

CDS
ATGTGCACACCAGGCTCCGTCATGTCTCCAGTATGGACCATGGACAACATTATGGAGAAGCGTTCGGATTCGGACAGAGCCTCGATTTACTCCAGATCCAGTGGGAGCGCTTCTGAATACAGCGTGCCGCGGGGCTCCTGCATCCTGGACAAGAGCTTCGACTCCAAGCGGTCCAGTCCCGTGGGATGCTGCACGCCCACAATCCCCGCCAAGGTCGGCTGTCAGTGCTGGCAACAGAAACCCTGTTGCTGCAAGAAGAGGGTCTTCAGTGGACCTTACGAGAACTACGACGTGCCAAAAATTCCTATGCCATTGATACAGGAGCACCCGTCCGACGGCTCCGACCCCGCCAGTCTGTACGACACACCAAAGAAACTGAAATGTCTCGTCGGGGGCCCGTGCGGCTGCGGACCAGGCGCCGACCCACCCGCCAACTACGTCAACATCGAACCAGCCAAACCCGAACCCGTCGACTACGGGAACTACGCCAACGTCGACCTCAGCGCGACCCTCGAAAAATTCGAAAGCTCCATACAGATCCTGAGAAGCGCGGGCTTCAGTCAGGAGGAGCTCGACGCTCTCGAGGACATACCGGAGAACGACGACGATATATCGACGGCGACGAACAACACGGTGCACCAGACGGAGTACGGCAACGACCACGACGACTACATGCAAATGGAGCCGGCAGAGAACAGCTCCTCCAGCCACAGCAACAAGAACTACTCGGACAACGTGAGCAGGACCAGCCACGTGTCGGACCCCACGCACTCCGACCGGGACCCCACGCACTCCGACCCGGACCCCACGCTGGGCGCGCGCCGGTCCAACTCCGTGGACTTCACGAAGAAACACGACGAGGACCGCCTCAGCAGCCGCTCGTGCTTCACGCCGATCGCGCTCAGGAGGACCTGTAAAACTGATAACATGAACGGCGGCTTGCAATACAAGACCTTAGAGATCGTCGAGTCCAAAGACAGGCTGTTCAAGGGATCAGAGTCCAGGACGGAGAATACGCTCGTGGCTAAGTTCAGAGACGCGGTGAAGATAAGACGGTCCTCCAGCGTGCCCAGCAAGTCCGACAAGAACAGGGACTCGTCCAGCTCCAACGACTCCGGCGTGTCCACCGGCTCCCTGAAGCACCACAAAGGTGATTTTGAATTCGAAACGCCGGTGACCAACTCCAAGTCCGTGAAGAAGCATCTGAAGAGTAAGCAGACGCGGAGGGGCCCTGCCCCGGCGCAGGAGACGATTGTCAAGTCCAACTCCTCGGACCCGCTCAAGAACCTAACGTTCCAGTTCGACGAGGTCGCCACCCTGACCAGGGCTGGCTCGTGCGACGCCGACACTCTGACCAGGAGGAAGAAGAGGAACGCGGAGGGCGACGCCAGCGCGCGCCACAGCCAGCTCACCAACAAGAGCACGTCCAGCGGCGCCTCCGACACCTCGGACTACATGGAGTCGCTGTCCGTCTCCTCGTTCAGCTCGTGCGACGCCGCCGCCGAGAGGCACTGCGCCCGGCCCCGCTCCGGACGCGAGTACGCCAGCGCCGGCCGCGCCGCACTGGCCGCGCTCGCCGCCGCCCCCGCCGACACGCTCCAACTGGCCGGGTCGAACCCGGATCCTAAGGTCCATGGGCCAACATCACTACCAGCTGGACCAATGGAGCGACGACCAAAAAAATATCCAAGTTGA
Protein
MCTPGSVMSPVWTMDNIMEKRSDSDRASIYSRSSGSASEYSVPRGSCILDKSFDSKRSSPVGCCTPTIPAKVGCQCWQQKPCCCKKRVFSGPYENYDVPKIPMPLIQEHPSDGSDPASLYDTPKKLKCLVGGPCGCGPGADPPANYVNIEPAKPEPVDYGNYANVDLSATLEKFESSIQILRSAGFSQEELDALEDIPENDDDISTATNNTVHQTEYGNDHDDYMQMEPAENSSSSHSNKNYSDNVSRTSHVSDPTHSDRDPTHSDPDPTLGARRSNSVDFTKKHDEDRLSSRSCFTPIALRRTCKTDNMNGGLQYKTLEIVESKDRLFKGSESRTENTLVAKFRDAVKIRRSSSVPSKSDKNRDSSSSNDSGVSTGSLKHHKGDFEFETPVTNSKSVKKHLKSKQTRRGPAPAQETIVKSNSSDPLKNLTFQFDEVATLTRAGSCDADTLTRRKKRNAEGDASARHSQLTNKSTSSGASDTSDYMESLSVSSFSSCDAAAERHCARPRSGREYASAGRAALAALAAAPADTLQLAGSNPDPKVHGPTSLPAGPMERRPKKYPS

Summary

Pfam
PF02174   IRS
Interpro
IPR002404   IRS_PTB        + More
IPR011993   PH-like_dom_sf       
IPR037746   Dok-7       
IPR001849   PH_domain       
IPR037747   Dok-7_PH       
Gene 3D

Ontologies

Topology

Length:
564
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00066
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00053
outside
1  -  564
 
 

Population Genetic Test Statistics

Pi
219.001461
Theta
197.299428
Tajima's D
1.355085
CLR
0.087828
CSRT
0.753712314384281
Interpretation
Uncertain
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