Gene

KWMTBOMO01539

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr3(+):13113269-13118153      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.959 Mitochondrial   Reliability : 2.052

CDS

ATGGAAAGCGTGCGTGTGAGAGAGGAGCTGACAAATATGCGTGCGACCCTCGACGGGGTCGTAGGTTGCCAGAGCAACTCTATACTTCCGCCACCCCCCCAAGTTGACATTCTGGAGGAAAAGGATAAGGAAATCGAGGAGCTGAAGCGGAAACTCATGATCCTGGAGGCCCGCACCTCCAATGTTGAGCGCGCGAGGCCATTGCTGGCGCACGAGCGCCCCGCGACGATACCATCGTCACGCGGAACAGTGGCGGCACCAGCGCCTTCAAAAGCCACAGCGACCAAAGTGAGTGCAGCACCCGCGACGCGCGCGCTGGCTAACTTGGCCACACCGGTCAAGTCTGCTAGCAGGCGAGTGCATGCTCAGCCTGCAAGGTCGCCGACCGCCGCTCCTGCCCCACTTCAAACAGCAAAAGCGGGGCCTGGTAGGAGCCGCGCAAAGCAAAAGAGGGGCATGAACGCCACCAAGCAGGCGCAGACCCCCCAGCCACGTCCACTACCCCCCGCCCCGTCCAACATGAACGAGGCGTGGACGACTGTGGTGAGGCGGGGTGGAAGGAAAGCGCAAGCCTCACTTGACCCTCGGCTCGTCCCTGCGGCCGCCGCTCCCCAGGCTATAGGTCGAACGGTAGCTGGGACTAAGAAGAAGGGGCGGAAGCCAAGGAAACCGCGCGCCCCACGGTCGGCGGCAGTCGTTTTAGAGCTGCTGCCGGCTGCGAAGGAAAAAGGCCTCACTTACGGGGAGGTGATGGCCCAGGCGCGCTGTAGCGTAGATATAGACGCTATAGGCGTAGAGGGTGGCATCCGAGTCCGGCACACGGCCAACGGGGCTCGGCTGCTTGAATGTCCCGGTGCCGACTCCGGCGTGGCTGCGGACAAACTGGCGACCCGGCTTCGTGAAATCCTGCCGGACTCGCAAGTCGTGCGAATCGAAAGGCCCGTCAGGATGGCAGACATTAAAGTGACGGGCCTGGATGAGTGCGCCACTAAGGTGGAAGTGGCCGCCGCTATTGCATCGCAGGGTAACTGCGCCCTCGCACAGGTGAAGGTGGGAGAGCTCCGGAGTTGTTACTCTGGGACCTTCACTGTGTGGGCGCGTTGCCCTGTGCAGGCTGCCATCCTCTTGGCCACGCCTCCACAGGTTCGGCCTGCCGACTCGCCGGGAAAGCTGCGCGTGGGTTGGGTAATAGCCCACGTGCAGCTGCAGGAGGCACGTCCATGGCGATGCCTCCGGTGCTTTGGCACCGGGCACGGCCTCGCCAGGTGCCCGTCGTCTGTGGATCGCAGCGGACTTTGCTTTCGCTGCGGTCAGCCCGGACACAAGGCAGCCTCCTGCACCGCTGCCGCACCGCACTGCGTGTTGTGCGACGCAGTGAAGCGGCGGGCCGATCATCGGGCCGGGGGTCCGGCCTGTCTTTCCGCACCCTCCTCCACTAAGAGGAGGCGTGGCGGAAAAAAGAAAAAGAAGATAGAGGAAGAGCCGGCTGCGTGTGAAACAGCCGGCCGGGCGCAGGATCTCCTCGTCCACACCATGGCGGAGTGGTTCATCGACATCGCTATCGTCGCGGAGCCATACTTCGTACCTCCCGACCGGGAGGATTCCTGGGCCGGAGATGTTGATGGATCCGTGGCGATCGTGATGCGACAGTCAGCGGCATTGCCCCCCCTTGGAATGGTGGCCAGGGGATCCGGGTATGTCGTAGTTAGGGTTGACGAAACCGTCGTGATCGGGGTGTACTTCTCTCCGAACAGGAGTCTCGCCGAGTTCGAGCGGTTCCTGGGTGGGCTCGAGGCGTTGGTTCATCGCTTCGAGTCTCGCCCGGTGATACTAGCGGGGGACCTCAATGCTAAATGCACAGCGTGGGGCTCCCCCCGCACGGACTCGCGTGGCGAGTTCCTGTCGGAGTGGGCCTTCGCGACCGGCCTCTGTCTTCTAAACAGAGGTTCGGTCGCGACCTGCGTGCGGTGGAACGGGGAATCACACGTGGACGTGTCGTTCGCGTCTCCGTCCGCCGCGCGCCGTGTCCGTGGCTGGCGTGTCCTCGAGGGGGCGGAGACGCTCTCGGACCATCGGTTTGTCCGATTCGAGCTCTCCGTTTCCACCTCGTTGAACGCGCCGGCCGAAGACGCCCGCGGCGAGGAGGAGCTCCCGCGTAGTACCCCCCGATTATTCCCGCGATGGGCACTGAAGCGCCTGAATAAGGTGCTCGCGGTGGAGGCGGCCACTGTGGCCGCGTGGGCGCCGATGCCCGCGCGTCTAGTGGACGTGGAGTTGGAGGCCGACTGGTTCCGGGGTACGATGCGTCGCGTCTGCGATGCTGCGATGCCCCGGGTCAGCGGTCGCGCTTCACGTGGCGGTGCGTATTGGTGGACGCCCGCGATCGCACTCCTCAGAGAGGAGTGCGTGCGGGCACGCCGCCGAAGCGCCCGCCACCGCCGTCGCCGTCTTCGCGATACAGATTTCGCGGAGGTGGCGGCCCGCCTGCATGCCGACTGCCGTGAGAAGCAGGAGGCTCTGCGGCGGGCCATCGGCGAGGCCAAGTCTCAGAGCATGAAGACGCTCCTGGAGACGCTCGATCAGGATCCCTGGGGGCGCCCGTACCAGACGGTACGCAAGAAATTGCGACCGTGGACGCTCCCGGTGACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGATATTGTCTCCGGGCTGTTCCCGCGGATGGAGAGGGACTTCGAGCCCCCCTTCATGGGCGTGCCGCCACGCAATGACGTGGGCGGTGATGCCCCTGCTGAGGTGGTCCCTCCGAGCATCTCGGAGGAGGAGATTCGTGCGGCCGTGTTGAGGATGCGGAGGAAAGACGCGGCCCCCGGCCCTGACGGTGTTCACGGTCGGGTTTGGGATTTGGCCTTCGGTGCCCTTGGGGACCGGCTCGTGCGGCCCTTTGAAGCCTGCCTCGAGTCGGGACGGTTTCCAAAGCAGTGGAAGACGGGCAGACTTGTTCTGCTGAGGAAGGAGGGACGCCCTGCGGACTCACCTGCGGGGTATCGTCCCATCGTGTTGCTGGACGAGGCGGGAAAACTGCTCGAGCGGGTGGTGGCCGCCCGCATCGTCCAGCATCTGACGGGGGTGGGTCCCGATCTGTCAGCGGAGCAGTTTGGATTCAGGGAGGGCCGCTCGACCATCGACGCGGTGATGCGCGTGCGTGCCCTCTCTGATGAGGCTGTCGGCCGGGGCGGGGTTGCACTGGCGGTGTCTCTTGACATCGCCAACGCGTTCAACACCTTGCCCTGGTCGGTGATCGCAGGGGCGCTGGAGTATCACGGCGTCCCTGCGTATCTCCGTCGGCTGATCGGGTCCTACCTCGAGGACAGGTCGGTCGTGTGCACCGGGCACGGTGGGGCGGTGCTCCGCTTCCCCGTCCAGCGCGGTGTTCCACAGGGGTCGGTCCTTGGCCCTCTCTTGTGGAACATCGGCTACGACTGGGTCTTGCGTGGCGCCCTAAGCACTCCTCTCCCGGGTCTGAGCGTAGTTTGCTACGCGGACGACACTTTGGTCGTGGCCCGGGGGAGGGACTTGCGAGAGTCTGCCCGTCTTTCCTGCGCGGGGGTGGCCTTCGTCATCGGCAGGATCCGAAGGCTGGGTCTGGAGGTGGCGCTCGATAAATCCCAGGCCCTGTTGTTTCACGGGGCCCGGAGAGCGCCGCCTCAGGGGGCCCACCTCGTGATCGGAGGCGTTCGCGTCGAGATCGAGGCGACCGGGTTGCGGTACCTCGGTCTCGTACTGGACGGTCGTTGGAGCTTCCGCGCTCACATTGAGAGATTAGGTCCCCGACTGATGGCGGCCGCCGGCTCGCTGAGTCGGCTGTTGCCGAACGTCGGGGGCCTGACGTGGTGGGCGGTTCGTGGATACCGCACCGTCTCGTTCGAGGCGGCGTGCGTACTAGCTGGGACGCCTCCCTGGGACCTGGAAGCGGAGGCGCTCGCTGCGGATTACGCGTGGCGATGCGATCTCCGCTCCAGGGGGGAGCCGCGTCCTGGTGCGGCGGAAGTTCGAGCGCGGAAGCTTCAATCTCGGCGTTCCGTGCTCGAGGCGTGGTCTCGCCGCCTGGCGGACCCCGCCTACGGGCGACGGACCGTCGAGGCGATCCGCCCGGTCCTCTCGGACTGGGTGAATCGCGACCGAGGACGTCTCACTTTCCGAGCGACGCAGGTGCTCACGGGACACGGCTGTTTCGGTCGCTACCTGCACCTCGTCGCCCGGAGGGAGCCGACTCCGAAGTGCCACCACTGCAGTGGCTGCAACGAGGACACGGCGGAGCACACGCTCGCGTACTGCCCCGCTTTCGCGGAGCAGCGCCGCGTCCTCGTTGCAAAAATAGGACCGGACTTGTCGCTTCCGACCGTCGTGGCTAGGATGCTCGGCAGCGACGAGTCCTGGCAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCGGAAGGAGGCGGCGGAACGGGAGAGGGAGAGCTCTTCTTCCCTCTCGGCGCCGTGCCGCCGCCGTCGGGCCGGGGGCCGGAGGAGGGCGTTTGTCCAGCTCCAGCCCCTATGA

Protein

MESVRVREELTNMRATLDGVVGCQSNSILPPPPQVDILEEKDKEIEELKRKLMILEARTSNVERARPLLAHERPATIPSSRGTVAAPAPSKATATKVSAAPATRALANLATPVKSASRRVHAQPARSPTAAPAPLQTAKAGPGRSRAKQKRGMNATKQAQTPQPRPLPPAPSNMNEAWTTVVRRGGRKAQASLDPRLVPAAAAPQAIGRTVAGTKKKGRKPRKPRAPRSAAVVLELLPAAKEKGLTYGEVMAQARCSVDIDAIGVEGGIRVRHTANGARLLECPGADSGVAADKLATRLREILPDSQVVRIERPVRMADIKVTGLDECATKVEVAAAIASQGNCALAQVKVGELRSCYSGTFTVWARCPVQAAILLATPPQVRPADSPGKLRVGWVIAHVQLQEARPWRCLRCFGTGHGLARCPSSVDRSGLCFRCGQPGHKAASCTAAAPHCVLCDAVKRRADHRAGGPACLSAPSSTKRRRGGKKKKKIEEEPAACETAGRAQDLLVHTMAEWFIDIAIVAEPYFVPPDREDSWAGDVDGSVAIVMRQSAALPPLGMVARGSGYVVVRVDETVVIGVYFSPNRSLAEFERFLGGLEALVHRFESRPVILAGDLNAKCTAWGSPRTDSRGEFLSEWAFATGLCLLNRGSVATCVRWNGESHVDVSFASPSAARRVRGWRVLEGAETLSDHRFVRFELSVSTSLNAPAEDARGEEELPRSTPRLFPRWALKRLNKVLAVEAATVAAWAPMPARLVDVELEADWFRGTMRRVCDAAMPRVSGRASRGGAYWWTPAIALLREECVRARRRSARHRRRRLRDTDFAEVAARLHADCREKQEALRRAIGEAKSQSMKTLLETLDQDPWGRPYQTVRKKLRPWTLPVTERLQPQQLRDIVSGLFPRMERDFEPPFMGVPPRNDVGGDAPAEVVPPSISEEEIRAAVLRMRRKDAAPGPDGVHGRVWDLAFGALGDRLVRPFEACLESGRFPKQWKTGRLVLLRKEGRPADSPAGYRPIVLLDEAGKLLERVVAARIVQHLTGVGPDLSAEQFGFREGRSTIDAVMRVRALSDEAVGRGGVALAVSLDIANAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEDRSVVCTGHGGAVLRFPVQRGVPQGSVLGPLLWNIGYDWVLRGALSTPLPGLSVVCYADDTLVVARGRDLRESARLSCAGVAFVIGRIRRLGLEVALDKSQALLFHGARRAPPQGAHLVIGGVRVEIEATGLRYLGLVLDGRWSFRAHIERLGPRLMAAAGSLSRLLPNVGGLTWWAVRGYRTVSFEAACVLAGTPPWDLEAEALAADYAWRCDLRSRGEPRPGAAEVRARKLQSRRSVLEAWSRRLADPAYGRRTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGRYLHLVARREPTPKCHHCSGCNEDTAEHTLAYCPAFAEQRRVLVAKIGPDLSLPTVVARMLGSDESWQAMLDFCESTISRKEAAERERESSSSLSAPCRRRRAGGRRRAFVQLQPL

Uniprot

A0A2W1C3J5   A0A0J7KQK3   A0A0J7N0R3   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KRB8   + More
A0A0J7KIS5   J9JWJ3   X1WZ64   X1WJY4   J9KM84   J9KJG8   J9KT61   J9LQQ1   J9KWM9   J9LA43   A0A139WN93   A0A139WNC9   X1WXT5   J9M6A5   A0A139W940   A0A139W9B3   A0A139W939  

Pubmed

28756777    18362917    19820115   

EMBL

KZ149896    PZC78733.1    LBMM01004272    KMQ92618.1    LBMM01012412    KMQ86235.1    + More
LBMM01008278    KMQ89009.1    LBMM01005474    KMQ91485.1    LBMM01003988    KMQ92922.1    LBMM01006977    KMQ90149.1    ABLF02013358    ABLF02013361    ABLF02054869    ABLF02011183    ABLF02041884    ABLF02011238    ABLF02018942    ABLF02041885    ABLF02041886    ABLF02009073    ABLF02030702    ABLF02042963    ABLF02030663    ABLF02041312    ABLF02011927    ABLF02018098    KQ971310    KYB29499.1    KYB29500.1    ABLF02004854    ABLF02041317    ABLF02020969    KQ972691    KXZ75806.1    KQ972544    KXZ75869.1    KXZ75807.1   

Proteomes

UP000036403    UP000007819    UP000007266   

Pfam

PF01553   Acyltransferase        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC
PF00075   RNase_H

Interpro

IPR000477   RT_dom        + More
IPR002123   Plipid/glycerol_acylTrfase       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       
IPR000663   Natr_peptide       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.30.420.10    

ProteinModelPortal

A0A2W1C3J5   A0A0J7KQK3   A0A0J7N0R3   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KRB8   + More
A0A0J7KIS5   J9JWJ3   X1WZ64   X1WJY4   J9KM84   J9KJG8   J9KT61   J9LQQ1   J9KWM9   J9LA43   A0A139WN93   A0A139WNC9   X1WXT5   J9M6A5   A0A139W940   A0A139W9B3   A0A139W939  

PDB

1WDU     E-value=6.4345e-09,     Score=150

KEGG

105841441    no KO assigned | (RefSeq) uncharacterized LOC105841441

GO

GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0003964   GO:0004523   GO:0005179   GO:0005576   GO:0005515   GO:0004725   GO:0016311   GO:0016791   GO:0006418   GO:0006334   GO:0003779  

Length:

1523

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01684

Exp number, first 60 AAs:

8e-05

Total prob of N-in:

0.00002

outside

1  -  1523

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0.855661

CSRT

0

Interpretation

Uncertain