SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01535
Annotation
PREDICTED:_keratin-associated_protein_5-5-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.666
 

Sequence

CDS
ATGAATGGGGCAGGTCAATATGTTCCTAACTTCATACATCCGCAAGTAGCTTTTGGCGTTCGAGATTTGTCAGTGGAAGACTGCGGCTCCGGTGAAGAATACTTGTCGTGCGGCTGGTGTGAGCCCAGCTGCTCTGAGCCGACGCCTTCGTGCCCTCCAGGAGTTTGCACTCGAGGATGCCTCTGCCGTCCACCGCTCATAAGACATAAGAGCGGACGCTGTATTCATGAGAAGGACTGTCTTGCACAAAATTGTCTAGATCCAAACGAGGAGTATGTCTGTCGGTACGGATGCGAGCCAAGCTGCGACAGTCGTCCTTGTACGATGCGACCCAGACGATGTTCTCTGGGCTGCTATTGCAAACCAGGACTTGTGCGTCATAATCACACTAAACGATGCATCAAACGCGAACATTGTAGCTCCATCGATACAATAAAAAAAACTGTAAATTAA
Protein
MNGAGQYVPNFIHPQVAFGVRDLSVEDCGSGEEYLSCGWCEPSCSEPTPSCPPGVCTRGCLCRPPLIRHKSGRCIHEKDCLAQNCLDPNEEYVCRYGCEPSCDSRPCTMRPRRCSLGCYCKPGLVRHNHTKRCIKREHCSSIDTIKKTVN

Summary

Pfam
PF01826   TIL        + More
PF00149   Metallophos
PF08321   PPP5
PF03153   TFIIA
PF01521   Fe-S_biosyn
Interpro
IPR036084   Ser_inhib-like_sf        + More
IPR002919   TIL_dom       
IPR000742   EGF-like_dom       
IPR041753   PP5_C       
IPR029052   Metallo-depent_PP-like       
IPR013235   PPP_dom       
IPR011236   Ser/Thr_PPase_5       
IPR013026   TPR-contain_dom       
IPR006186   Ser/Thr-sp_prot-phosphatase       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR004843   Calcineurin-like_PHP_ApaH       
IPR016092   FeS_cluster_insertion       
IPR035903   HesB-like_dom_sf       
IPR004855   TFIIA_asu/bsu       
IPR000361   FeS_biogenesis       
SUPFAM
SSF57567   SSF57567        + More
SSF48452   SSF48452       
SSF89360   SSF89360       
Gene 3D

Ontologies

Topology

Length:
150
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.17613
outside
1  -  150
 
 

Population Genetic Test Statistics

Pi
333.095243
Theta
155.780815
Tajima's D
3.608855
CLR
0.40312
CSRT
0.9966001699915
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号