Silkworm Genome Informatics Database

Gene

KWMTBOMO01532

Pre Gene Modal

BGIBMGA009069

Annotation

PREDICTED:_nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]

Location

Bomo_Chr3(+):12938589-12951913 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.011

CDS

ATGAAGAAAAAACCTGTGCCTCGTTTAAAGTTTGAAAATAGTCGTAAGACTATACGCAAACAGAAAAGGCAGCAAAAAAAAATTCATCGCCAAGAACATTATTTGAAGAAAAAAACCCCACAACCGTCTATAATTCATCCCCAGCATACTCCGGGAAGGTTCGTAAAGAGACCAGCAGATGGACAAGATACTACAGAAATGAAGAAAAAACGAAAGAAACCCAATGCGCCAAGCTATGACATCCTTAACAAAGAGAGACAAAAGGAAATCAACGAAGCAGACCAATTAAAGTCAGAGATGGAAGAACAGCGACGGAAGATACTCCTCAAAGCCAATGAGGAAGAAGATCTCCTGATAAAAAAGCTTGAGAAACAAATGGGCCTAAATAAATCTAAAAACAAGAACAATTACTTTTCTGAAGATGGTTTGGACTACCTTTTAGAAATATGTGACAGATCAACAACAGAACAGATAGTGGCTGCAGAAAAACATTTAGCTGAAGTTGATGGTGATTCAGACTTTGAAGAAGACATAGCAATTGTTACAGGAAAAGACAAACACCAAAATAAATCTCAGGAAGTAGATCTGCACAATAGTGATGATCAATTTGACAATAGTGAAGAGAGTTGTGCTGAAGAGGCAGAAGATGGTTTAAGTGATGAATATGATGATTTGGATGATGATTATGATGGAACAGATAGTGAGCTCGAAGAAAAACCGAAAATCTCTAGCAAGAACAAAACAGACAAAAAGAAAATTAAAGAAAGAACAGTAAAAGAAGAATCAAGCAATGCTAGTAGTGAAGATGAAAAAGCACACCTGTCCAGTGATAATGATGAAAGTGATTTAAATGATGAACCAGAAGGAAAACAGATTAAGAAGACAAAAGAAGAGAAAAAAGAAAGAATAATTAAAGCGGATGACATATCTAAAGTGTTCAGTGATGATGAGATCTCTCATTTGTCTAGCGATGATATAGATGATGAAAACGTTGAACCTAATGAGAAACCTGACATTTGGGAGGATATATATGGACGTAAGAGAGATAAAGACGGAAATGTCATAAAGGAACAAAAAGGTACATACATACCGCCCCATCTACGTAAACAAGACGTTGCACTCGAAAAAGATTTGACACAACTCAAGAGGCAAATAAAAAGTGTGCTGAACAAGCTGGCGGGCACGAACCTGCACTGGGCTTGCACGTCCATAGAGAACCTGTACGCCAACAACAGCAGGCACGCAGTCAACACCAGCCTCAGCGACCTGTGGCTGCACGCGACCGTGGCGCCCCCCGCCCCCAACCCCGCACTCCCCGCCCCCGCCCCCGCCGCGCCCGCCCGCCTCGTGGCCGAGCACGCCGCGCTGGTCGCCGTGCTGCACGCCAATGTTGGATCCGAAATAGGGGCGCATTTCCTCCAAGTGCTGTGTAAAGAGTTCGACAAGGCGATGCAGATCCCGCAGCCGGTTGAGGATAAGCGCCTGGACAACCTCGTCTCCTGTCTCTCGTATCTCTACACCTTCAAGGTGTACCACGCGGCCCTTTTGTACGACGTGCTAGCGCGTCTGCTCGCCGACGTCACCGAGAAGGGCATAGAGTGCGTGCTGGTGGCCCTGAGGGCGGTCGGCGGAGTGCTGCGGAAGGAGGAACCTCTGGCCCTCAAGAACTTCATACACGAGACGCAGGAGAGAGTGACGCGGCTCAGCGAGGACGCCGCCAGAGGGTCTCGCATAAAGTTCCTGCTCGAAGTTCTAATGGCGGTGAAGAACAACAACCTCACCAAGATCCCGCAGTACGACCCCGCGTACGCGGAACACTTGAGGAAGTCCATCAAGGGGATCATCAGGAAGGGGAACTACGTCACGACACTCAACATACGACTAGAAGACTTGTTGAAAGCCGATGAGAGAGGTAAGTGGTGGGTGGTGGGGTCGGCGTGGGAGGGCGGGGCGCGGCAGGGGGAGGCGCGGCGGGAGGACGCGCGGCCGCCGCCCTCCGTCGACCAGAAGCTGCTGGAGCTCGCGCGGAAACAGAGGATGAACACGGACGTCAGGAGGAGCATCTTCTGCGTCATCATGTCTGCAGAGGACTACATGGATGCGTTCGAGAAGCTCCAGCACCTGGGCCTGCGGGGGCAGCAGGAGCGGGAGGTGGCGCACGTGCTGCTGGCCTGCTGCCTCCAGGAGACCACGTACAACCCGTACTACGGCGTCCTGGGACGGAAGCTGTGCGAGTTTGACAGGAAATATCAGCTATCCATACAGTTCACGGTGTGGGACAAAATAAAGGACATAGAGAACCAGTCGAAACAGGCGCTAACGAATTTAGCGCAGTTCCTCGTTCATTTAATTATGGAGAAGGGCCTGGCGCTCTCGGTGCTCAAGATCATCCAGTTCTCGGAGCTGAGCAAGCGGTCGGTTCGCTTCATGCGGCAAGTTCTGCTGTCGATCATAATGAACGAAGACGTGGCCTCGTCGCTCGAGGTGTTCCAGCGGGTGGCCCGGCCGCCCAAGCTGCACGTGTTCAGGGAGAGCCTGCGGCTGTTCATCCAGCACTTCCTGGTGAAGACCGCGGGCCGCAGCGGCGCCCTGGGGCCGCACGACGCCGCCGCGCTCGCCCTGCGCGCCGCCGACGTCGACGCGATACTCACCCGGCACGAATCTAAGCTTAAGCTGTGA

Protein

MKKKPVPRLKFENSRKTIRKQKRQQKKIHRQEHYLKKKTPQPSIIHPQHTPGRFVKRPADGQDTTEMKKKRKKPNAPSYDILNKERQKEINEADQLKSEMEEQRRKILLKANEEEDLLIKKLEKQMGLNKSKNKNNYFSEDGLDYLLEICDRSTTEQIVAAEKHLAEVDGDSDFEEDIAIVTGKDKHQNKSQEVDLHNSDDQFDNSEESCAEEAEDGLSDEYDDLDDDYDGTDSELEEKPKISSKNKTDKKKIKERTVKEESSNASSEDEKAHLSSDNDESDLNDEPEGKQIKKTKEEKKERIIKADDISKVFSDDEISHLSSDDIDDENVEPNEKPDIWEDIYGRKRDKDGNVIKEQKGTYIPPHLRKQDVALEKDLTQLKRQIKSVLNKLAGTNLHWACTSIENLYANNSRHAVNTSLSDLWLHATVAPPAPNPALPAPAPAAPARLVAEHAALVAVLHANVGSEIGAHFLQVLCKEFDKAMQIPQPVEDKRLDNLVSCLSYLYTFKVYHAALLYDVLARLLADVTEKGIECVLVALRAVGGVLRKEEPLALKNFIHETQERVTRLSEDAARGSRIKFLLEVLMAVKNNNLTKIPQYDPAYAEHLRKSIKGIIRKGNYVTTLNIRLEDLLKADERGKWWVVGSAWEGGARQGEARREDARPPPSVDQKLLELARKQRMNTDVRRSIFCVIMSAEDYMDAFEKLQHLGLRGQQEREVAHVLLACCLQETTYNPYYGVLGRKLCEFDRKYQLSIQFTVWDKIKDIENQSKQALTNLAQFLVHLIMEKGLALSVLKIIQFSELSKRSVRFMRQVLLSIIMNEDVASSLEVFQRVARPPKLHVFRESLRLFIQHFLVKTAGRSGALGPHDAAALALRAADVDAILTRHESKLKL

Uniprot

NA

ProteinModelPortal

NA

PDB

6QDV E-value=2.45626e-09, Score=152

KEGG

101746096 K17583 nucleolar MIF4G domain-containing protein 1 | (RefSeq) nucleolar MIF4G domain-containing prot

GO

GO:0003723 GO:0005515 GO:0005488 GO:0004930 GO:0006420 GO:0004812 GO:0006418 GO:0006334 GO:0003779 GO:0016021

Length:

892

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05149

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00023

outside

1 - 892

Pi

183.228509

Theta

206.324136

Tajima's D

0.290007

CLR

152.290871

CSRT

0.452877356132193

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics