SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01528
Pre Gene Modal
BGIBMGA009066
Annotation
PREDICTED:_uncharacterized_protein_LOC106138839_isoform_X1_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 3.413
 

Sequence

CDS
ATGTGGTCTCCACTCTTCATCGTGGTATCGTTGTTGGCGTCCATCGAAGCCCACGGTCGTGTTGAATCGCCTCCCTCGCGCGCATCGGCCTGGCGTGCCGGTTTCCCCACAGAACCAGACTATGACGACGACGGCGTCAACTGCGGCGGAATGTGGCATCAGTGGAGCTATAATCGCGGAAGATGCGGAATCTGCGGGGATCGGTACGACGCGCCGACACCGCGACCCCACGAGCTCGGAGGAAGATACGGAGACGGCATCATAGTGGCCCATTACAATCCCGGGGCGATTTTCACAACGACCGTCCACCTGACCACTTCACATTTGGGCTTCTGGGAGTTCAAACTATGCCCTGACCCAAAGGACAACGCGCAAGATTGCTTCGATCAATACCCCCTTGAGCTAGAAAATGGGGGGACTAAATACTACCCAAAGAAAGGTAGTGTGAGGTACAATGTGAACTACAGACTACCCCCTGGCTTGGTGTGCGAACATTGTGTCTTGCAGTGGAGGTATACTGCTGGAAATAACTGGGGAGTGTGCAGCAATGGTACTCAAGGATTGGGCTGCGGAAACCAGGAGCAGTTCGGGGCCTGTTCTGATATATCTATAGGGAAATCGAGGATCGGAAGTAGACCTGTTGAGGCCTCTCCGTTGCTCTACTATTTGAGCAGGGGATATATAGGTGTACATCAAGGTGAGTGA
Protein
MWSPLFIVVSLLASIEAHGRVESPPSRASAWRAGFPTEPDYDDDGVNCGGMWHQWSYNRGRCGICGDRYDAPTPRPHELGGRYGDGIIVAHYNPGAIFTTTVHLTTSHLGFWEFKLCPDPKDNAQDCFDQYPLELENGGTKYYPKKGSVRYNVNYRLPPGLVCEHCVLQWRYTAGNNWGVCSNGTQGLGCGNQEQFGACSDISIGKSRIGSRPVEASPLLYYLSRGYIGVHQGE

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01029543    NWSH01001836    PCG69951.1    KQ459562    KPI99769.1    AGBW02009954    + More
OWR49503.1    AGBW02013278    OWR43669.1    KQ461175    KPJ07811.1    HM357863    AEA76329.1    KX230122    AOD62631.1    JTDY01013883    KOB52075.1    JTDY01003049    KOB70244.1    OWR49504.1    ODYU01011663    SOQ57551.1    ODYU01004819    SOQ45089.1    SOQ45090.1    BABH01003932    AGBW02007651    OWR55034.1    NWSH01000169    PCG78816.1    KZ150097    PZC73597.1    ODYU01003938    SOQ43308.1    JTDY01008433    KOB64570.1    KK118517    KFM73151.1    GBXI01002186    JAD12106.1    KQ459582    KPI99104.1    KQ460651    KPJ12980.1    GL888441    EGI60760.1    KZ288227    PBC31781.1    CH964272    EDW84867.1    KQ981727    KYN36682.1    GL438827    EFN68357.1    KA648758    AFP63387.1    GDHF01031720    GDHF01024778    JAI20594.1    JAI27536.1    KQ976428    KYM87789.1    KQ435116    KZC14700.1    CH477376    EAT42320.1    KK852507    KDR22451.1    CVRI01000047    CRK97811.1    NEVH01002568    PNF41958.1    JRES01000826    KNC28058.1    KQ977991    KYM98313.1    KK107260    EZA54026.1    GL449965    EFN81701.1    GAMC01003116    JAC03440.1    KQ971345    EFA05326.2    KQ414731    KOC62367.1    MWRG01008845    PRD27422.1    CH933806    EDW13930.1    CH891578    KRK05033.1    KRK05034.1    CP012526    ALC47947.1    APCN01000909    AAZX01000213    AAZX01004457    AJWK01022430    AJWK01022431    AJWK01022432    AJWK01022433    AJWK01022434    ADMH02001371    ETN62789.1    UFQT01000367    SSX23580.1    AAAB01008987    EAA00829.5    AXCN02000250    AE014296    EFA98704.2    KQ769958    OAD52711.1    UFQT01002249    SSX33022.1    JH432107    AXCM01000026    CH902623    KPU72692.1    CH916369    EDV93924.1    ATLV01013255    KE524848    KFB37605.1    DS235862    EEB19272.1    CM000070    EDY68458.3    EDP28082.3    CH954177    KQS71091.1    APGK01017449    APGK01017450    KB740033    KB632072    ENN81884.1    ERL88549.1    CH479185    EDW37968.1    IAAA01024107    LAA07547.1    CH940650    EDW66492.2    KQ982169    KYQ59502.1    JXJN01010482    HACA01013041    CDW30402.1    OUUW01000014    SPP88349.1    SPP88348.1    CCAG010017947    HACA01010339    CDW27700.1    GDRN01044318    JAI66932.1   
Pfam
PF03067   LPMO_10        + More
PF16740   SKA2
PF03348   Serinc
PF16030   GD_N
PF00089   Trypsin
PF13855   LRR_8
PF08416   PTB
PF00017   SH2
Interpro
IPR004302   Cellulose/chitin-bd_N        + More
IPR002321   Cyt_c_II       
IPR000104   Antifreeze_1       
IPR042091   Ska2_N       
IPR005016   TDE1/TMS       
IPR029554   SERINC2       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR031986   GD_N       
IPR033116   TRYPSIN_SER       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR011993   PH-like_dom_sf       
IPR033929   Tensin_PTB       
IPR000980   SH2       
IPR036860   SH2_dom_sf       
IPR013625   PTB       
SUPFAM
SSF50494   SSF50494        + More
SSF56219   SSF56219       
SSF55550   SSF55550       
Gene 3D
PDB
5MSZ     E-value=3.72928e-47,     Score=472

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.999403
 
 
Length:
234
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04478
Exp number, first 60 AAs:
0.01402
Total prob of N-in:
0.01024
outside
1  -  234
 
 

Population Genetic Test Statistics

Pi
249.828628
Theta
152.117788
Tajima's D
2.41369
CLR
0.35377
CSRT
0.936603169841508
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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