SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01527
Pre Gene Modal
BGIBMGA009065
Annotation
PREDICTED:_uncharacterized_protein_LOC106138813_[Amyelois_transitella]
Location
Bomo_Chr3(+):12877689-12880622      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 3.995
 

Sequence

CDS
ATGTTAATTTGTTGGAATTACTTTCGTAAGTCTGACGATGAATATATTTTCAGAAATTCAACTGTTCCAACGTTCAGTTCACCACCGAATTCTCCTCTAGTTGGTCTCGTGTTCGATCCATCTTCTCATAACTACCACGGGTCAGGTATAATGGGCGATAGGGGTGCGAACCTCGACAGACGTTCCCAAAGTACATGGTCGATAAACAGTCTAGAGCCAATAGGGACTGGTGCTAAGAAAAAAATTGTAAAGAGTCAAGACAAACGTAATGCGTACAGCGCCGATCCACGATATCACGACCGAGGCAAAGACGAATATGACCGACAAAGAAGCCTCCGAGCTGAATCGTCGTCGAGTCTTGATTTTTACGTCGAAGGCGAACGTATGGTCTCGGAACTATGCAACATACCTGATTGTAAGACCGAGAAAACTGGCCAGTTGAAAAATAATCATAAAGGTTCTAACCTAGATGAGGATAAAATTAAATCGGCTTCATCCGAATTACTACTTACGGCTTTAGACAAAATAGTCGTACATGATCAAATTCCAAATCAAATTGTTCAACTTGCTATTGAAGCTTGCACCGATGCTGAGAATATTGCTATAGCTCATCACAACAGGCCCTGCTTTAAAAACATACATTCGATTTGCGCCAAAACTAGGTCTAACGTCCAAAAACCGGATAGTGCAGTAGCTAACTTACACTCTCAGGGAATACCCTGGGTCATTAAGAACTTTATATTTTCCTTCGTTAGGATTTTAGACGGATGGAAGGGTGTAAAAGAGTTACTTAGCGAAAAACACGATACATTTTCCAGAATTGAAAACAAGTATTACAGTCCTAATATCAGAGAATGCTTTGTGCAATGGCAGGCGGTCACCAAGGAAATGTTAACACACATATATAAGACATTCAAGTGTCTTGATCACGGTTTTACTATGGAACAAAAGAGTTTTGCACACAACTATTATGCAACTAATTCTGCAGCACCTAGACACCAAGCCCAAAGTAAATATCAACCGCCCAAACCTCAAATCAGTAACCCCAGACCAATAAATGTATCTCCGCAACCATTCAGTACTGTTCAACCACCTTGGATTCAAGGTCAAAGCCAAACAAGTAATCAATCGTTCAACGAAGTACCATGGGGGCGACCTGGAGTTAGCTATAAAAAGTTTCCCGTTGTACCACCTAGTACTTTTTACCCTTTAAACGATCAAAGTGATATTGAAGTTTACCAGAAAGTGTCATATAAATGTGATCCTTGTAGCATACGTGAAGCTAAACCTCGTCAATCTTGGACGATTGCCAACACTCCTGACTTCCGCTCATTTGAAAGTGTTTGTCATACGGATCAGAGAGATTTATATAATCAATTGAAACACAAAATAGATGCTGAGCTGGTCAAAGCTCCAGGTCAACCCGTGATGAGTAGCAGCATGGTCTGCGATCTGTTACAGCGAAGGGAAATGGAAATGAAAGCAAAAATGATTCCGTTGAGTCACGTTGAAAAGACTCTGATACCAAGTATGGCATCTGCCGTGGATCCAAGAACTTGTTTTGTACACAAAAACAATAGTTGTGGTGACACAAAAGAAGAGAATGATTTTTTTGCGACATGGGGTCAGATAACACAAAAAGAAACTAATGATTACATGGCTCATCACACTCATAACGTTCAGAATTCACCAAGCGTTTTGACTGTATCAAGTAATGTTTCTGGCCCCGTAAATTTTCTAGATGAAAATGATGAGTTCCACGAAATGGCTAAAGTTTATATGAAACCAGGAAGCTACAAAGTTCCCATTAAGCCAGCCGATGCGTTCGCGTCAAGTAGTTCACAAGACGCTGGGATCGAAGGACAAGCTTTAGATGAATTAAATACAATGCAAATAAAAGCATCGTTTTCAACAATAACTTTAGCACCACAGCCAAAGTATAATCTGGAATCTTGGCCATGCATAATGACCAGAAGAACGGAAGAGGTTTATAGCGAGGATCAAAAAGTTATAGGTAAACCATTGCATACCACAACTTGCTTAGACGTCAGCTCTACAAATCAGGTGGATCTTTTAAGCTCTATGACTTCAGACAGAGCTTGGGAAGCTGCGAAGCAGTCTGCACCGAAACTAATGGACTTTTTGCACGAGGACTCGAAATCCGATACGGCGAGACTCTACGATGCTTTAGGCTTGTGCACCAATGACGATTACACTGATTTAACGCAAACTAAAGCAGGAATCGAAGAGACTGACGAATGGACCGGTACTATGCCATCAAACACAAGCTTCTGGAATCAGAATACTCGGAACGACCACTGTGTGAAAAGTACAAATGATTCAGTGCCACTTGAAGAAGCAACAAAAAATCAAGATACAGAGATTAGAGCTAAAGACGCAAATGACACTATTGAAGTTTCTGACTCAAACGAACCAAAAGAGCCTCCCCGATGTCCGAGCTTTGACCAAAGCGGTAACTGCATTAGAGATGAAACTCACAAGAAATCCACCGGCAAATTGAAAGTTGGAGCATCCGGTATGTGGTATCACCCGAAAAAGAAAAAGCCATTATCGAGTGGCATTGTTAAGAAATTTGAAAATTTACTTGCCAATTTGTCGAAAGTGAACGAAGCTGCATTTATTCAACAAGATATGGATATTAAAATGGTTAGATTGCTTTTTTTATTTGCTTAA
Protein
MLICWNYFRKSDDEYIFRNSTVPTFSSPPNSPLVGLVFDPSSHNYHGSGIMGDRGANLDRRSQSTWSINSLEPIGTGAKKKIVKSQDKRNAYSADPRYHDRGKDEYDRQRSLRAESSSSLDFYVEGERMVSELCNIPDCKTEKTGQLKNNHKGSNLDEDKIKSASSELLLTALDKIVVHDQIPNQIVQLAIEACTDAENIAIAHHNRPCFKNIHSICAKTRSNVQKPDSAVANLHSQGIPWVIKNFIFSFVRILDGWKGVKELLSEKHDTFSRIENKYYSPNIRECFVQWQAVTKEMLTHIYKTFKCLDHGFTMEQKSFAHNYYATNSAAPRHQAQSKYQPPKPQISNPRPINVSPQPFSTVQPPWIQGQSQTSNQSFNEVPWGRPGVSYKKFPVVPPSTFYPLNDQSDIEVYQKVSYKCDPCSIREAKPRQSWTIANTPDFRSFESVCHTDQRDLYNQLKHKIDAELVKAPGQPVMSSSMVCDLLQRREMEMKAKMIPLSHVEKTLIPSMASAVDPRTCFVHKNNSCGDTKEENDFFATWGQITQKETNDYMAHHTHNVQNSPSVLTVSSNVSGPVNFLDENDEFHEMAKVYMKPGSYKVPIKPADAFASSSSQDAGIEGQALDELNTMQIKASFSTITLAPQPKYNLESWPCIMTRRTEEVYSEDQKVIGKPLHTTTCLDVSSTNQVDLLSSMTSDRAWEAAKQSAPKLMDFLHEDSKSDTARLYDALGLCTNDDYTDLTQTKAGIEETDEWTGTMPSNTSFWNQNTRNDHCVKSTNDSVPLEEATKNQDTEIRAKDANDTIEVSDSNEPKEPPRCPSFDQSGNCIRDETHKKSTGKLKVGASGMWYHPKKKKPLSSGIVKKFENLLANLSKVNEAAFIQQDMDIKMVRLLFLFA

Summary

Uniprot
H9JHR7   A0A2H1VW61   A0A2A4JEW9   A0A194Q8N6   A0A0L7L4A8   A0A194QQM9   + More
A0A212F6Y8  
Pubmed
19121390    26354079    26227816    22118469   
EMBL
BABH01029548    ODYU01004819    SOQ45091.1    NWSH01001836    PCG69952.1    KQ459562    + More
KPI99770.1    JTDY01003049    KOB70245.1    KQ461175    KPJ07813.1    AGBW02009954    OWR49505.1   
Proteomes
UP000005204    UP000218220    UP000053268    UP000037510    UP000053240    UP000007151    + More
PRIDE
H9JHR7   
Pfam
PF00439   Bromodomain
Interpro
IPR001487   Bromodomain        + More
IPR036427   Bromodomain-like_sf       
SUPFAM
SSF47370   SSF47370       
Gene 3D
1.20.920.10    
ProteinModelPortal
H9JHR7   A0A2H1VW61   A0A2A4JEW9   A0A194Q8N6   A0A0L7L4A8   A0A194QQM9   + More
A0A212F6Y8  

Ontologies

KEGG
NA   
GO

Topology

Length:
897
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00488
Exp number, first 60 AAs:
0.00064
Total prob of N-in:
0.00026
outside
1  -  897
 
 

Population Genetic Test Statistics

Pi
263.240157
Theta
198.451202
Tajima's D
0.980927
CLR
0.209067
CSRT
0.655067246637668
Interpretation
Uncertain
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