Silkworm Genome Informatics Database

Gene

KWMTBOMO01520

Pre Gene Modal

BGIBMGA014078

Annotation

PREDICTED:_uncharacterized_protein_LOC105841577_[Bombyx_mori]

Location

Bomo_Chr3(+):12815149-12816434 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.166

CDS

ATGTCCGTCGAAAATAAAACACGCGTTCCCAATTTTTCAAAATCGGAAACAGAATTGCTCACAAGCTTGGTGAGACAATATAGCCATATATTGGAAAATAAAAAAAGTGATATGACAAATAATCAGCTGAAGGAGCAAACTTGGTCAAAGCTGGCCAAAGAATTCAACAGTTTGTCGTCATTTGTGTTCAGAAGTGACAAGACTCTTCGCGCAAAGTATGACAATATAAAAAAGAGGGCCAAGACCAAATATAGTACGTTTCGGAGAAGTTTGTATGGAACAGGGGGTGGACCATCCGCTGAAATTAATTTCAGTCAAGAAGAGGAAGTGGTAATGGAGTTATCTGGGACTAGTGTGATGGGATTACCATCTCGCAATGACTGTGATGAGATAGTAATAACAAAGGAAACAAAGGAAAAATATGCCGAGACCAGCCAAGACACAGCACTTCCGGCAAAAAATAATCAAAATATACTGATTGATGAAAAAATTATTGAATCAGAAACCCCAAAGAGCAGTAATTTTCTATTAAAGAGAAAAATATCTACACCCCTCACCAAAAAGAATCCAGAAGTGTTCAATAAAACAATGAACAATTATAGTGCCTTGGCCAATAAAAAAATTAAATTACTGGACGCACAAATTGACAATTTAAATAAAAAACAAGAACAAGAAGTAAAGGAGCATGAACTGAGATGTACACTTCTACAATTAGAAATTGACATTAAAAAAAAAGTACTCGATAGTTTTAATTAA

Protein

MSVENKTRVPNFSKSETELLTSLVRQYSHILENKKSDMTNNQLKEQTWSKLAKEFNSLSSFVFRSDKTLRAKYDNIKKRAKTKYSTFRRSLYGTGGGPSAEINFSQEEEVVMELSGTSVMGLPSRNDCDEIVITKETKEKYAETSQDTALPAKNNQNILIDEKIIESETPKSSNFLLKRKISTPLTKKNPEVFNKTMNNYSALANKKIKLLDAQIDNLNKKQEQEVKEHELRCTLLQLEIDIKKKVLDSFN

Uniprot

A0A2S2P755 A0A146LEA5 A0A2S2NHP0 A0A1B6KKS9 J9JYM4 A0A2S2N9R8 + More
J9KQP1 A0A2A4KAY8 A0A226ELX1 A0A2P8Z2G3 A0A0Q9WMW6

Pubmed

26823975 29403074 17994087

EMBL

GGMR01012583 MBY25202.1 GDHC01013789 JAQ04840.1 GGMR01004081 MBY16700.1 + More
GEBQ01027927 JAT12050.1 ABLF02011552 GGMR01001344 MBY13963.1 ABLF02034876 NWSH01000015 PCG80822.1 LNIX01000003 OXA58695.1 PYGN01000225 PSN50687.1 CH940650 KRF82817.1

Proteomes

UP000007819 UP000218220 UP000198287 UP000245037 UP000008792

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1
IPR026709   Msantd3

ProteinModelPortal

A0A2S2P755 A0A146LEA5 A0A2S2NHP0 A0A1B6KKS9 J9JYM4 A0A2S2N9R8 + More
J9KQP1 A0A2A4KAY8 A0A226ELX1 A0A2P8Z2G3 A0A0Q9WMW6

KEGG

105841577 no KO assigned | (RefSeq) uncharacterized LOC105841577

GO

GO:0003677 GO:0008152 GO:0016747 GO:0004930 GO:0006420 GO:0004812 GO:0006418 GO:0006334 GO:0003779 GO:0016021

PANTHER

PTHR23098 PTHR21632

Length:

251

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00095

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11430

outside

1 - 251

Pi

230.415404

Theta

156.226871

Tajima's D

1.417868

CLR

312.488002

CSRT

0.765261736913154

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree