SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01520
Pre Gene Modal
BGIBMGA014078
Annotation
PREDICTED:_uncharacterized_protein_LOC105841577_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.166
 

Sequence

CDS
ATGTCCGTCGAAAATAAAACACGCGTTCCCAATTTTTCAAAATCGGAAACAGAATTGCTCACAAGCTTGGTGAGACAATATAGCCATATATTGGAAAATAAAAAAAGTGATATGACAAATAATCAGCTGAAGGAGCAAACTTGGTCAAAGCTGGCCAAAGAATTCAACAGTTTGTCGTCATTTGTGTTCAGAAGTGACAAGACTCTTCGCGCAAAGTATGACAATATAAAAAAGAGGGCCAAGACCAAATATAGTACGTTTCGGAGAAGTTTGTATGGAACAGGGGGTGGACCATCCGCTGAAATTAATTTCAGTCAAGAAGAGGAAGTGGTAATGGAGTTATCTGGGACTAGTGTGATGGGATTACCATCTCGCAATGACTGTGATGAGATAGTAATAACAAAGGAAACAAAGGAAAAATATGCCGAGACCAGCCAAGACACAGCACTTCCGGCAAAAAATAATCAAAATATACTGATTGATGAAAAAATTATTGAATCAGAAACCCCAAAGAGCAGTAATTTTCTATTAAAGAGAAAAATATCTACACCCCTCACCAAAAAGAATCCAGAAGTGTTCAATAAAACAATGAACAATTATAGTGCCTTGGCCAATAAAAAAATTAAATTACTGGACGCACAAATTGACAATTTAAATAAAAAACAAGAACAAGAAGTAAAGGAGCATGAACTGAGATGTACACTTCTACAATTAGAAATTGACATTAAAAAAAAAGTACTCGATAGTTTTAATTAA
Protein
MSVENKTRVPNFSKSETELLTSLVRQYSHILENKKSDMTNNQLKEQTWSKLAKEFNSLSSFVFRSDKTLRAKYDNIKKRAKTKYSTFRRSLYGTGGGPSAEINFSQEEEVVMELSGTSVMGLPSRNDCDEIVITKETKEKYAETSQDTALPAKNNQNILIDEKIIESETPKSSNFLLKRKISTPLTKKNPEVFNKTMNNYSALANKKIKLLDAQIDNLNKKQEQEVKEHELRCTLLQLEIDIKKKVLDSFN

Summary

Pfam
PF13873   Myb_DNA-bind_5
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1       
IPR026709   Msantd3       

Ontologies

Topology

Length:
251
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00095
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11430
outside
1  -  251
 
 

Population Genetic Test Statistics

Pi
230.415404
Theta
156.226871
Tajima's D
1.417868
CLR
312.488002
CSRT
0.765261736913154
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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