SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01511
Pre Gene Modal
BGIBMGA009059
Annotation
putative_Mitochondrial_2-oxoglutarate/malate_carrier_protein_[Danaus_plexippus]
Full name
Profilin      
Location in the cell
Mitochondrial   Reliability : 2.028 PlasmaMembrane   Reliability : 1.693
 

Sequence

CDS
ATGTTCAAAACTACATTTGATTATCGTTCTGATCCGAAAAGAATGATGTCGACCTGCTTCGTCCAACCGGCGGATTTGGTGAAAACACGGATGCAACTGATGGGCCCGGCGGGGAAGAAGGTATCCACGTTAGCAGTGGCCCGCGAGGTCGCTCGGAAGGAAGGGGTGCGTGGCTTCTACAGAGGGCTCACGGCCGCGCTGTTCCGACAAGCCACTTACACCACGGGCAGAATGGGCTGCTTCAACTCTTTGTTGGAGTACTACAAGAGTACCTATGGTGGAACTCCGAATTTTGCAACTAAAATCTGCTTGGGCATGGTAGCTGGTGGCGTGGGCGCGTTCGCCGGCACTCCGGCTGAAGTGGCCCTCGTACGGATGACGGCCGACGGACGTCTGCCCAAAGAACAGAGGAGGAATTATACGAACGTTTTCAATGCCCTTGGAAGGATCACAAGAGAAGAAGGTATTACAGCGTTATGGCGCGGCGCTGGGGCCACTATAACCAGAGCTATGGTGGTGAATGCGGCTCAGCTCGGGACATATGCACAAGCTCGAGAAGCTCTGCTTCCGTCAATGGGAGAAGGCATATTCTTACATTTCTGTGCTTCAATGATCTCCGGCCTGGTGACAAGTGCTGCTTCCTTGCCTGTTGATATCGTCAAAACAAGAGTGCAGAACGCGGCAAAAGGCACAGGTCAAGTGACAGTGCTCCTGAGCATTATCAAGAACGAGGGTGTGTTCGCTTTGTGGAGAGGTTTCTTGCCGACATACGCCAAGATTGGACCACACACTGTCTTAACATTTATATTCATGGAACAACTCAACTCTTTGTATTTCAAAATGGCTTGA
Protein
MFKTTFDYRSDPKRMMSTCFVQPADLVKTRMQLMGPAGKKVSTLAVAREVARKEGVRGFYRGLTAALFRQATYTTGRMGCFNSLLEYYKSTYGGTPNFATKICLGMVAGGVGAFAGTPAEVALVRMTADGRLPKEQRRNYTNVFNALGRITREEGITALWRGAGATITRAMVVNAAQLGTYAQAREALLPSMGEGIFLHFCASMISGLVTSAASLPVDIVKTRVQNAAKGTGQVTVLLSIIKNEGVFALWRGFLPTYAKIGPHTVLTFIFMEQLNSLYFKMA

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
Belongs to the profilin family.
EMBL
AGBW02008911    OWR52211.1    NWSH01000043    PCG80321.1    NWSH01001153    PCG72344.1    + More
PCG72346.1    KQ459562    KPI99788.1    AGBW02008248    OWR53948.1    PCG80318.1    BABH01029576    KQ460941    KPJ10583.1    KPI99786.1    GDQN01008576    GDQN01006021    JAT82478.1    JAT85033.1    GBHO01001953    GBHO01001952    GBHO01001951    GBRD01008205    GBRD01008204    GDHC01019362    JAG41651.1    JAG41652.1    JAG41653.1    JAG57616.1    JAP99266.1    GFTR01004816    JAW11610.1    GECU01030596    GECU01024978    GECU01018431    GECU01011511    GECU01007791    JAS77110.1    JAS82728.1    JAS89275.1    JAS96195.1    JAS99915.1    RJVU01046259    ROL44378.1    JTDY01006079    KOB66316.1    UXUI01007211    VDD86298.1    CU656043    BC071521    AAH71521.1    GECZ01028964    GECZ01028205    GECZ01018965    GECZ01018611    GECZ01016242    GECZ01007861    JAS40805.1    JAS41564.1    JAS50804.1    JAS51158.1    JAS53527.1    JAS61908.1    GU589489    ADO29439.1    KQ977279    KYN04085.1    GL435225    EFN73757.1    REGN01001429    RNA34706.1    HAED01013245    HAEE01011755    SBR31805.1    HADZ01011076    HAEA01002322    SBQ30802.1    HADY01007414    HAEJ01000050    SBS40507.1    HAEG01007972    SBR80636.1    HAEF01010409    SBR50327.1    HAEH01005133    HAEI01008695    SBR75724.1    HAEB01018830    HAEC01000014    SBQ65357.1    GL888181    EGI65811.1    GEBQ01023988    GEBQ01014140    GEBQ01012514    GEBQ01011530    JAT15989.1    JAT25837.1    JAT27463.1    JAT28447.1    BT046956    ACI66757.1    BT050183    ACI69984.1    ADTU01026158    LJIJ01000025    ODN05308.1    HQ206466    ADX97064.1    KQ982959    KYQ48768.1    BC123333    CM004470    AAI23334.1    OCT90718.1    AGCU01029925    APGK01017094    APGK01017095    KB739995    KB632192    ENN82037.1    ERL89886.1    BT127790    AEE62752.1    KQ978615    KYN29815.1    AMQM01008796    KB095851    ESO11150.1    GEFM01003122    JAP72674.1    KQ971361    EFA08739.1    GADI01000799    JAA73009.1    HADW01001975    HADX01005486    SBP27718.1    JI175073    ADY46961.1    UZAF01016841    VDO34600.1    GEDC01030043    GEDC01002883    JAS07255.1    JAS34415.1    GEFH01000697    JAP67884.1    KK107079    EZA60141.1    NNAY01005338    OXU16743.1    GFPF01009801    MAA20947.1    GEDV01005520    JAP83037.1    AFFK01020433    ACPB03022134    AMQN01005353    KB295796    ELU12634.1    GDRN01047846    JAI66703.1    KQ981382    KYN42316.1    GBBI01002795    JAC15917.1    GBBM01001820    JAC33598.1    JARK01001350    EYC24399.1    GBBK01003037    JAC21445.1    LNIX01000003    OXA58630.1    GBBK01003061    JAC21421.1    GFAA01000682    JAU02753.1    AERX01051622    BC093472    KV460449    AAH93472.1    OCA17921.1    GBYX01207508    JAO77416.1    UFQT01000092    SSX19589.1    JW871629    AFP04147.1    KQ041359    KKF27893.1    KQ976435    KYM87068.1    BC072308    AAH72308.1    GL732685    EFX67149.1    KB497182    EMP41196.1    GFAC01000852    JAT98336.1    CP026244    AWO97460.1    KZ347087    PIO68472.1    GDIP01117746    JAL85968.1   
Pfam
PF00153   Mito_carr        + More
PF00235   Profilin
Interpro
IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR023395   Mt_carrier_dom_sf       
IPR002067   Mit_carrier       
IPR002030   Mit_uncoupling_UCP-like       
IPR005455   PFN       
IPR036140   PFN_sf       
SUPFAM
SSF103506   SSF103506        + More
SSF55770   SSF55770       
Gene 3D
PDB
2LCK     E-value=1.02829e-27,     Score=305

Ontologies

Topology

Length:
282
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
42.4167
Exp number, first 60 AAs:
0.04065
Total prob of N-in:
0.64022
outside
1  -  282
 
 

Population Genetic Test Statistics

Pi
300.171468
Theta
197.896974
Tajima's D
1.497391
CLR
0
CSRT
0.783460826958652
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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