SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01507
Pre Gene Modal
BGIBMGA009058
Annotation
PREDICTED:_mitochondrial_2-oxoglutarate/malate_carrier_protein-like_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.355 PlasmaMembrane   Reliability : 1.562
 

Sequence

CDS
ATGGAAAAACATGATAAAAAAATACATGGATTCGAAGACATCCCTCTAAGCACCAGAGTCGCCTTGGGTACAGTTGCAGGTATGACGGCCACAACGATACTCCATCCCTTGGACCTCGCTAAAGTCCGAATGCAGGTTTGCGACCACCCTGGCTCGACTTTGAACGTAATCCGACACGTGGGCAGGTGCGAAGGCTACGGCTCATTATATACTGGACTCTCCGCGGCTCTTCTGAGGCAGGCTACTTATACTAGTACGAGATTGGCCGTTTTCTATTTTCTCTACGACGAATACAGAAGGTTTGTATTTTCCTTACAAATATTCGATTAA
Protein
MEKHDKKIHGFEDIPLSTRVALGTVAGMTATTILHPLDLAKVRMQVCDHPGSTLNVIRHVGRCEGYGSLYTGLSAALLRQATYTSTRLAVFYFLYDEYRRFVFSLQIFD

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
EMBL
BABH01029576    KQ459562    KPI99788.1    UYWW01000190    VDM07668.1    KQ460941    + More
KPJ10583.1    UZAG01020424    VDO46709.1    UZAD01013761    VDN95739.1    AGBW02008248    OWR53948.1    NWSH01000043    PCG80318.1    CMVM020000376    UYRW01000136    VDK63566.1    JXLN01016653    KPM11202.1    NIPN01000113    OZG11059.1    JOJR01000533    RCN36699.1    JYDO01000105    KRZ70918.1    UYRX01001077    VDK88061.1    JYDU01000009    KRY00250.1    JYDR01000006    JYDT01000047    JYDS01000033    JYDV01000008    KRY77588.1    KRY88023.1    KRZ30591.1    KRZ43851.1    GDIQ01151790    JAK99935.1    UZAJ01040794    VDP16720.1    LN856934    CRZ24036.1    BT120892    ADD24532.1    GL732685    EFX67149.1    GDIP01185647    JAJ37755.1    GDIQ01249405    JAK02320.1    GEEE01019350    JAP43875.1    GDIP01205595    JAJ17807.1    GDIP01100557    LRGB01000512    JAM03158.1    KZS18399.1    GDIP01109249    JAL94465.1    GEEE01002079    JAP61146.1    GDIQ01267177    JAJ84547.1    MTYJ01000040    OQV19349.1    GDIQ01104248    JAL47478.1    GDIQ01009242    JAN85495.1    JH712230    EFO21996.1    JYDP01000009    KRZ16835.1    IACF01000865    LAB66607.1    GEEE01021497    GEEE01003181    JAP60044.1    GDIP01117746    JAL85968.1    BDRX01000129    GBF98596.1    DS268437    EFO99243.1    JYDK01000014    KRX83268.1    JYDW01000081    LVZM01021445    KRZ57135.1    OUC41400.1    KZ270025    OZC07691.1    GDIP01078149    JAM25566.1    KT163636    AKN21586.1    NEDP02005424    OWF41065.1    UYYF01000008    VDM94987.1    JYDN01000001    KRX68794.1    JYDI01000006    KRY60439.1    JYDJ01000161    KRX41793.1    JYDM01000091    KRZ88032.1    JYDL01000029    KRX22769.1    GL764522    EFZ17532.1    JYDH01000102    KRY32235.1    LSYV01000003    KXZ55742.1    QOIP01000010    RLU17795.1    KQ421337    KOF77724.1    GDIP01213146    JAJ10256.1    GL379838    EGT52749.1    GL378353    EFJ46035.1    GANO01002629    JAB57242.1    JYDQ01000110    KRY14676.1    NMWX01000640    OZF77242.1    KK107079    EZA60141.1    GDKF01009575    GDKF01004006    KL662095    QOKY01000215    JAT69047.1    JAT74616.1    KFM23594.1    RMZ52061.1    CH954178    EDV50960.1    KK852428    KDR24074.1    HE600960    CAP27326.1    NWSH01001153    PCG72344.1    PDUG01000002    PIC49785.1    FM992693    CAX41240.1    JTDY01006079    KOB66316.1    LK028594    CDS23875.1    LBMM01007492    KMQ89698.1    KQ414646    KOC66421.1    AM293890    CAL25813.1    AM293883    AM293885    AM293888    AM293892    CAL25806.1    CAL25808.1    CAL25811.1    CAL25815.1    AM293884    CAL25807.1    DS496135    EDP01145.1    JI174164    ADY46599.1    AM293889    CAL25812.1    AM293886    FM245011    FM245016    FM245019    CAL25809.1    CAR92937.1    CAR92942.1    CAR92945.1    AE014296    AM293882    AM293887    AM293893    FM245009    FM245010    FM245013    FM245015    FM245017    AAF47932.1    CAL25805.1    CAL25810.1    CAL25816.1    CAR92935.1    CAR92936.1    CAR92939.1    CAR92941.1    CAR92943.1    AY094704    AAM11057.1    FM245012    FM245014    FM245018    CAR92938.1    CAR92940.1    CAR92944.1    FM245020    CAR92946.1    AM293891    CAL25814.1   
Pfam
PF00153   Mito_carr        + More
PF01965   DJ-1_PfpI
Interpro
IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR023395   Mt_carrier_dom_sf       
IPR002030   Mit_uncoupling_UCP-like       
IPR002067   Mit_carrier       
IPR029062   Class_I_gatase-like       
IPR002818   DJ-1/PfpI       
IPR006287   DJ-1       
IPR002113   Aden_trnslctor       
SUPFAM
SSF103506   SSF103506        + More
SSF52317   SSF52317       
Gene 3D
PDB
2LCK     E-value=0.000310907,     Score=97

Ontologies

Topology

Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.50959
Exp number, first 60 AAs:
8.23421
Total prob of N-in:
0.37865
outside
1  -  109
 
 

Population Genetic Test Statistics

Pi
73.716642
Theta
120.817023
Tajima's D
-0.54731
CLR
0
CSRT
0.235288235588221
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号