SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01501
Pre Gene Modal
BGIBMGA009055
Annotation
PREDICTED:_solute_carrier_family_22_member_3-like?_partial_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.847
 

Sequence

CDS
ATGCACCAGATGTACGGCCGGAAGCCAACCCTGGTCGTATGTGTGGTGGGAAGCTGCATCGGACAGCTGAAGAAATTCGCCACCACATGGGACCTGTACATCGTCATAGAGTTTCTCGAAGCGTGTTTGTCCGGTGGAAGCTACACTCCTGCTATGGTCCTATTGCTAGAGATATGTGGTAGGAAGCATAGGATCTTGTCGGGCGTTCTCTTCGCCTACTTCATCTACCTCGGGGAGTCGCTGTTCGCTTGCATCGCCATGTTCGCGCCTTACTGGAAGACGATCGTTACGATCATATACAGTCCTTTGGTTCTCTTCGTGTTCTACTTCTTCCTGGTCCACGAGAGTCCGCGGTGGTTAATCGTGAAAGGGAAAACCGAGCAAGCGAAAGCCGCCCTCCGCAGAATAGCCGAAGCGAACAAGCTGGATTTGAACCACGAGGAGTTTGATGACCTGAATGAGGCGCAACTGAAACAGAAGTTCAATATAACAGACGTCGAGGTCAAGGAGAGGTTGGCAGCTGTCTTCATGTCGAAAGAGATCCTCAAGAGGCTATTAGTTTCGACCGTGTGCAGGTTCACGGCTAGCTTCGTGTACTATGGGCTGATGATCAACTCCGTGTTGCTGCCCGGGGACAAGTACACGAACTTTCTGCTGGCGACGATCATGTCGTTTCCTGGGGAGCTGATCTCGTTGTATCTGATGAACAAGATCGGAAGGAAGCTGCCGCTCATGGTCGGGTACGTGATGAGCGGCGTGCTGTGCATTGGGTCAGGATATGTGCCAGACTCGATGACTTGGGCGAAAATCTCTCTATTTCTATTTGGAAAAATGGTGATAGCCGCCTGTTACACGGGAGCTATCACGTACACGATGGAGTTGTTCCCGACCAGCGCACGTGGATCCCTACTCGGACTAGGCTCTTTCGCGTCCAGAGTCGGAGGAATGCTGGCCCCTTTAACACCAATATTGAGCACAGTATCGCCGACTTTACCTTCAATCTGCTTCGGTTGTTCGGCGGTGCTCTCCGGGGTATTGCTGACGCTGACGCCGGAGACCAAGGAACTCCCTCTCATGGACACCGTGCAGCAAGTCGAGGACAGCATCAGGAAGGCGAAAGAGATAGAGAGATCACAGCGCACATAA
Protein
MHQMYGRKPTLVVCVVGSCIGQLKKFATTWDLYIVIEFLEACLSGGSYTPAMVLLLEICGRKHRILSGVLFAYFIYLGESLFACIAMFAPYWKTIVTIIYSPLVLFVFYFFLVHESPRWLIVKGKTEQAKAALRRIAEANKLDLNHEEFDDLNEAQLKQKFNITDVEVKERLAAVFMSKEILKRLLVSTVCRFTASFVYYGLMINSVLLPGDKYTNFLLATIMSFPGELISLYLMNKIGRKLPLMVGYVMSGVLCIGSGYVPDSMTWAKISLFLFGKMVIAACYTGAITYTMELFPTSARGSLLGLGSFASRVGGMLAPLTPILSTVSPTLPSICFGCSAVLSGVLLTLTPETKELPLMDTVQQVEDSIRKAKEIERSQRT

Summary

Similarity
Belongs to the GST superfamily.
EMBL
BABH01029577    BABH01029578    ODYU01010552    SOQ55744.1    NWSH01004458    PCG65085.1    + More
KQ459562    KPI99797.1    KPI99792.1    KPI99794.1    KQ460941    KPJ10577.1    KPJ10575.1    KPJ10576.1    AGBW02008840    OWR52418.1    KPI99795.1    AGBW02008864    OWR52333.1    KZ149988    PZC75643.1    NWSH01001703    PCG70392.1    KQ459595    KPI95824.1    JTDY01010425    KOB58208.1    ODYU01002742    SOQ40621.1    KQ460473    KPJ14390.1    ODYU01001366    SOQ37440.1    NWSH01000100    PCG79572.1    PCG79564.1    NWSH01000834    PCG73941.1    AGBW02010973    OWR47451.1    PCG79570.1    KK852482    KDR22927.1    PCG79571.1    PYGN01001186    PSN36798.1    ODYU01002336    SOQ39701.1    KZ149964    PZC76264.1    BABH01041111    NEVH01001354    PNF42889.1    PNF42891.1    KQ414585    KOC70516.1    BABH01039623    ODYU01001220    SOQ37134.1    JR038305    AEY58206.1    KZ288444    PBC25689.1    KDR22929.1    BABH01036481    KK107403    EZA51300.1    APCN01003305    KQ979657    KYN19975.1    KQ434870    KZC09576.1    GL449663    EFN82259.1    QOIP01000011    RLU16525.1    KQ460313    KPJ16073.1    GAIX01012265    JAA80295.1    BABH01006647    ADTU01007112    ADTU01001734    GL888375    EGI62034.1    KQ982639    KYQ53259.1    AXCM01003135    AGBW02014542    OWR41475.1    KQ980905    KYN11533.1    KQ976885    KYN07327.1    KQ977259    KYN04595.1    KQ459606    KPI91072.1    AGBW02010753    OWR47904.1    JTDY01005496    KOB66937.1    GL437348    EFN70576.1    JTDY01000022    KOB79379.1    KPI95914.1    EGI62033.1    AXCN02001021    NWSH01002161    PCG69014.1    DS232756    EDS45428.1    KPI95923.1    KK852530    KDR21906.1    PNF42894.1    JTDY01005909    KOB66490.1    JTDY01000245    KOB78076.1    PNF42898.1    KQ981523    KYN40281.1    KYQ53258.1    PNF42897.1    ODYU01003881    SOQ43193.1    NWSH01003151    PCG66855.1    EDS45429.1    PCG69013.1    ODYU01000079    SOQ34232.1    ODYU01002328    SOQ39679.1    KPJ16069.1    PCG66854.1    KQ460325    KPJ15841.1    KYN19974.1    KQ459193    KPJ03082.1    PNF42895.1    AGBW02003000    OWR55596.1   
Pfam
PF00083   Sugar_tr        + More
PF07690   MFS_1
PF14497   GST_C_3
Interpro
IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004046   GST_C       
IPR004045   Glutathione_S-Trfase_N       
IPR040079   Glutathione_S-Trfase       
IPR010987   Glutathione-S-Trfase_C-like       
IPR005829   Sugar_transporter_CS       
SUPFAM
SSF103473   SSF103473        + More
SSF52833   SSF52833       
SSF47616   SSF47616       
PDB
4J05     E-value=1.90011e-07,     Score=132

Ontologies

Topology

Length:
381
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
157.76446
Exp number, first 60 AAs:
13.10909
Total prob of N-in:
0.48544
POSSIBLE N-term signal
sequence
inside
1  -  66
TMhelix
67  -  89
outside
90  -  93
TMhelix
94  -  113
inside
114  -  184
TMhelix
185  -  207
outside
208  -  216
TMhelix
217  -  235
inside
236  -  241
TMhelix
242  -  261
outside
262  -  265
TMhelix
266  -  288
inside
289  -  300
TMhelix
301  -  323
outside
324  -  326
TMhelix
327  -  349
inside
350  -  381
 
 

Population Genetic Test Statistics

Pi
177.844375
Theta
167.485904
Tajima's D
0.479574
CLR
0.048399
CSRT
0.509774511274436
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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