Gene

KWMTBOMO01494

Pre Gene Modal

BGIBMGA009053

Annotation

PREDICTED:_SH2_domain-containing_protein_4A-like_[Amyelois_transitella]

Location

Bomo_Chr3(+):12419330-12434684      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.391

CDS

ATGTGTAAAGACGGAGTTACAAAGGAGGCCGTCAAGATGCTGCAGAGGATCTTGCGCGACATGTGGGTGGATCCCGAGATCCTGGCCGAACTCGACGAGACCCAGAAACAAACGCTCTTCTGTAAAATGCGCGAGGAACAGGTACGAAGATGGCAGGCCTGGGACGATAAAATCAGCAAGGACGACATCCAGCCTAAGTTCCAGAAGAACGGGAAGAAGCAGGTCCAGTTCCTTAAAGGAGAAGACGGCGAACCATGGGTTTGGGTTATGGGTGAACATCCAGACGACAAGTCAATAGAGAGCATCCTAGCGGAGGAAGCGAGGCAGCGCGCCCTCGCCCAGGCTCGTGAGGAGGCGCACCAGCTCAGGAAGTCCGTCGAGAAGGAACTCACACAGCTTATCGACTACAAACCTCTAGACAGCTTGGAACAGAAATTCGACCTTTCACCAAAAAGCATAGACCCGCTGGACGACCTGGAGATCTACTGCACAGTCGACGAGCTCCGGCAGCGCATCGAGGCGCTGGAGCCCGAGGTGAAGATCTCGGAGAAGGAGGACCTAAGAAACGAGGACAACATGAAACTGGACCTGAACAAGAACACATTGCATTTCAATTTTATCGAAGGGAAAAGGGATGTTTTGCAGGATTTAGGCCTCCCGAACAACGAATGCGTGAGTCACCGGGTGGCGGCGTGGGAGCGTCGCGTGGCGGCCGCCCGGGCCGGGGATATCCTGCGCGGGATCCGGGCCAGGAGAGCGAAGACATTACGCGATGCGCAACTACACGCGCACGACGACGAGGCCGCCTGGAGGGAACAAGAACGCAAGGCAAAAGAAGCCGAAGCGAATATGAGGGAGATAGCTCGTGTCGCCAGGGAAGCCCATAGACGCAGCACAGACTTTGCAGACACAACCATCACTGATGCTTCACAAGCTGGTAAGCCACCGAGCAGGGAGGCGGTGCTGGAATGGTTCAGAACCCAGGAGCTGCCTCGAGGAGTCGGACTCGAAGAGAACAATAAACCAGTGGAATGGTTTCACGGTCTGATCAGTCGGTCCGAGGCCGAGTCGATCCTGTCGGGCGCCGCGCCGGGCAGCTTCCTGGTGCGCGTGTCGGAGCGCGTGTGGGGGTACGCGGTGTCGTACCGCGGCGCCGCGCGCTGCAAGCACTACCTGGTGGCGGCCGGCGAGCACTACCGCCTGCTCGGGACCAAGCGACGGGACCATCGGACTCTCGGTTAG

Protein

MCKDGVTKEAVKMLQRILRDMWVDPEILAELDETQKQTLFCKMREEQVRRWQAWDDKISKDDIQPKFQKNGKKQVQFLKGEDGEPWVWVMGEHPDDKSIESILAEEARQRALAQAREEAHQLRKSVEKELTQLIDYKPLDSLEQKFDLSPKSIDPLDDLEIYCTVDELRQRIEALEPEVKISEKEDLRNEDNMKLDLNKNTLHFNFIEGKRDVLQDLGLPNNECVSHRVAAWERRVAAARAGDILRGIRARRAKTLRDAQLHAHDDEAAWREQERKAKEAEANMREIARVAREAHRRSTDFADTTITDASQAGKPPSREAVLEWFRTQELPRGVGLEENNKPVEWFHGLISRSEAESILSGAAPGSFLVRVSERVWGYAVSYRGAARCKHYLVAAGEHYRLLGTKRRDHRTLG

Uniprot

H9JHQ5   A0A2H1W8M7   A0A2A4JGY1   A0A212ETJ0   A0A194RMQ5   A0A194Q468   + More
A0A0L7KYE4   D6WUR8   N6UAN6   A0A1Y1LBK6   A0A1B0D109   A0A0T6BBW9   A0A067RCT2   A0A1L8D909   A0A1L8D8P2   A0A1B6GPD5   A0A1B6DI63   E0VX42   A0A1W4WIT5   A0A146KT34   A0A0P4VTC8   T1I0A4   A0A2J7QHF4   A0A023F381   A0A2R5LI69   A0A293L5G6   A0A147BTY5   M7ATN8  

Pubmed

19121390    22118469    26354079    26227816    18362917    19820115    + More
23537049    28004739    24845553    20566863    26823975    27129103    25474469    29652888    23624526   

EMBL

BABH01029583    BABH01029584    ODYU01007010    SOQ49373.1    NWSH01001616    PCG70680.1    + More
AGBW02012571    OWR44800.1    KQ459989    KPJ18610.1    KQ459562    KPI99804.1    JTDY01004340    KOB68278.1    KQ971363    EFA09056.1    APGK01036308    KB740939    KB631813    ENN77711.1    ERL86382.1    GEZM01060404    GEZM01060403    JAV71004.1    AJVK01010174    AJVK01010175    LJIG01002141    KRT84799.1    KK852544    KDR21636.1    GFDF01011264    JAV02820.1    GFDF01011263    JAV02821.1    GECZ01005492    JAS64277.1    GEDC01011988    JAS25310.1    DS235829    EEB17948.1    GDHC01019131    JAP99497.1    GDKW01000110    JAI56485.1    ACPB03018329    ACPB03018330    NEVH01013976    PNF28009.1    GBBI01003081    JAC15631.1    GGLE01005088    MBY09214.1    GFWV01002037    MAA26767.1    GEGO01001187    JAR94217.1    KB560900    EMP28751.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000007266    UP000019118    UP000030742    UP000092462    UP000027135    UP000009046    UP000192223    UP000015103    UP000235965    UP000031443   

PRIDE

H9JHQ5   

Pfam

PF00017   SH2

Interpro

IPR036860   SH2_dom_sf        + More
IPR000980   SH2       

SUPFAM

SSF55550   SSF55550       

Gene 3D

3.30.505.10    

ProteinModelPortal

H9JHQ5   A0A2H1W8M7   A0A2A4JGY1   A0A212ETJ0   A0A194RMQ5   A0A194Q468   + More
A0A0L7KYE4   D6WUR8   N6UAN6   A0A1Y1LBK6   A0A1B0D109   A0A0T6BBW9   A0A067RCT2   A0A1L8D909   A0A1L8D8P2   A0A1B6GPD5   A0A1B6DI63   E0VX42   A0A1W4WIT5   A0A146KT34   A0A0P4VTC8   T1I0A4   A0A2J7QHF4   A0A023F381   A0A2R5LI69   A0A293L5G6   A0A147BTY5   M7ATN8  

PDB

2CS0     E-value=2.34268e-08,     Score=140

KEGG

101741857    K17577 SH2 domain-containing protein 4A | (RefSeq) SH2 domain-containing protein 4B-like

GO

GO:0005737   GO:0016301  

Length:

413

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00209

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02913

outside

1  -  413

 

 

Pi

19.072225

Theta

190.912586

Tajima's D

0.282773

CLR

0.631149

CSRT

0.452627368631568

Interpretation

Uncertain