Gene

KWMTBOMO01491

Pre Gene Modal

BGIBMGA009051

Annotation

PREDICTED:_thioredoxin_domain-containing_protein_15_[Papilio_machaon]

Location

Bomo_Chr3(+):12335540-12336822      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.483

CDS

ATGTGTGTTTGTATAGTGAAGAATGTAAATCTTGTGGTGGTTTTATTAATATGTTTAGCTCCAATAACAAGACAATATGATGTATCTGAAGAAACCCAATTAGAAGACGTTCCAAATGTCGATGAATCAGAATCATTACTCTCCAATGTTGTGTCAGACGTCAATAAAACTCTTACAAACCTTTACAACACAATGACACTAGCAAATGTCACTGCAGAAAATAAAACGCAGAATGTAAATGAAACTAGAAAACTCGTTAAATGTAAAGAGATTGTGTATGATGTCTCAGAAGAGGTAGAGCCAACAGTAGAACTTATAAATGCAACGTATTTGGGAAAATTGCTTCAAATAAACCCTGATATCACAACAAGAGATGTAGAGGCAGACTGTGTCTTAGTACTGTTTTACGCTAGAGCATGTCCGTTCAGTGCTCATGCAGCACCACATTTCAATGCTCTATCTAGATCATATCCTAATGTTAAAATGGTGGCAGTAGATGCTCTGAAGTACCATGGCATAAATGCTCAATATGGTATTATAGGGGTGCCGACTTTGAAAATGTTCCATAATGGAAGGCCTGTTGGAAAATTCAACGGGACAGAATATAACATACACTCATTCAGTAAGTTTGTTCATGCCATCACTGGTCAGAATCCTCAAGTGCTACTCGTCACTTCAAAGGATTTTCAAGGTCCTGTTTCTAGTGTAGTGGAGAAAGAAACTGATTATTTTCTTATTTTATCATGGCTGTTCATCTTGGTTTGTTCAGTTTATTATTTTGTGCAATCAAAATGGTGGACTATGATAGTGGAGATGGTACAGAATAATTGGCGGGAATCTGAGGCCCAGCATGAACATACAGATTGA

Protein

MCVCIVKNVNLVVVLLICLAPITRQYDVSEETQLEDVPNVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENKTQNVNETRKLVKCKEIVYDVSEEVEPTVELINATYLGKLLQINPDITTRDVEADCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLKMFHNGRPVGKFNGTEYNIHSFSKFVHAITGQNPQVLLVTSKDFQGPVSSVVEKETDYFLILSWLFILVCSVYYFVQSKWWTMIVEMVQNNWRESEAQHEHTD

Uniprot

H9JHQ3   A0A194RM60   A0A194Q2N5   S4PDB6   I4DPX9   A0A2H1X1S4   + More
A0A0L7LPY1   A0A2A4JH13   A0A2J7PDE3   A0A2P8ZNR3   D6WUR3   A0A1W4WUN2   A0A2A3E8I2   A0A088AMC7   J3JT99   A0A026X137   N6SZC8   A0A0N0BJR6   A0A0L7RC68   A0A154P3N1   A0A151I358   A0A158NMC5   E9J4L6   F4X5S0   A0A151WVJ8   A0A1B6BX66   A0A195D8G6   A0A0J7NKA5   A0A151K1G6   A0A151ISA4   K7IPP5   A0A1B6E4C2   A0A1S3D7P4   A0A224XGT4   A0A336MTV1   A0A336ML06   R4WR93   T1JD07   A0A1D2NCX3   A0A2S2QWH1   C4WWV4   X1WI99   Q172W3   U5EEM2   A0A1W7R7Z8   A0A182MJB7   A0A087T175   A0A182WEU2   A0A164UAJ6   A0A0P6H483   A0A023EMV5   A0A0P6J117   A0A0P6C4F6   A0A0P5D0B2   A0A084W1I9   A0A2M3ZE77  

Pubmed

19121390    26354079    23622113    22651552    26227816    29403074    + More
18362917    19820115    22516182    24508170    30249741    23537049    21347285    21282665    21719571    20075255    23691247    27289101    17510324    24945155    24438588   

EMBL

BABH01029593    KQ459989    KPJ18612.1    KQ459562    KPI99806.1    GAIX01003731    + More
JAA88829.1    AK403834    BAM19969.1    ODYU01012343    SOQ58604.1    JTDY01000425    KOB77246.1    NWSH01001616    PCG70682.1    NEVH01026389    PNF14354.1    PYGN01000008    PSN58110.1    KQ971363    EFA07811.1    KZ288340    PBC27764.1    BT126455    AEE61419.1    KK107046    QOIP01000004    EZA61798.1    RLU23905.1    APGK01058749    KB741291    KB630092    KB631759    ENN70588.1    ERL83384.1    ERL85872.1    KQ435711    KOX79531.1    KQ414615    KOC68587.1    KQ434796    KZC05740.1    KQ976507    KYM82790.1    ADTU01020385    GL768105    EFZ12270.1    GL888742    EGI58160.1    KQ982701    KYQ51903.1    GEDC01031416    JAS05882.1    KQ976750    KYN08729.1    LBMM01003998    KMQ92915.1    KQ981175    KYN45292.1    KQ981090    KYN09562.1    GEDC01013362    GEDC01004551    JAS23936.1    JAS32747.1    GFTR01004731    JAW11695.1    UFQT01001190    SSX29398.1    UFQS01001435    UFQT01001435    SSX10877.1    SSX30555.1    AK417187    BAN20402.1    JH432088    LJIJ01000086    ODN03113.1    GGMS01012841    MBY82044.1    AK342286    BAH72374.1    ABLF02036481    ABLF02036487    CH477430    EAT41066.1    GANO01004264    JAB55607.1    GEHC01000381    JAV47264.1    AXCM01001537    KK112922    KFM58864.1    LRGB01001581    KZS11190.1    GDIQ01034920    JAN59817.1    GAPW01002901    JAC10697.1    GDIQ01001393    JAN93344.1    GDIP01021184    JAM82531.1    GDIP01167144    JAJ56258.1    ATLV01019349    KE525268    KFB44083.1    GGFM01006037    MBW26788.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000037510    UP000218220    UP000235965    + More
UP000245037    UP000007266    UP000192223    UP000242457    UP000005203    UP000053097    UP000279307    UP000019118    UP000030742    UP000053105    UP000053825    UP000076502    UP000078540    UP000005205    UP000007755    UP000075809    UP000078542    UP000036403    UP000078541    UP000078492    UP000002358    UP000079169    UP000094527    UP000007819    UP000008820    UP000075883    UP000054359    UP000075920    UP000076858    UP000030765   

PRIDE

H9JHQ3   

Pfam

PF00085   Thioredoxin

Interpro

IPR013766   Thioredoxin_domain        + More
IPR036249   Thioredoxin-like_sf       

SUPFAM

SSF52833   SSF52833       

ProteinModelPortal

H9JHQ3   A0A194RM60   A0A194Q2N5   S4PDB6   I4DPX9   A0A2H1X1S4   + More
A0A0L7LPY1   A0A2A4JH13   A0A2J7PDE3   A0A2P8ZNR3   D6WUR3   A0A1W4WUN2   A0A2A3E8I2   A0A088AMC7   J3JT99   A0A026X137   N6SZC8   A0A0N0BJR6   A0A0L7RC68   A0A154P3N1   A0A151I358   A0A158NMC5   E9J4L6   F4X5S0   A0A151WVJ8   A0A1B6BX66   A0A195D8G6   A0A0J7NKA5   A0A151K1G6   A0A151ISA4   K7IPP5   A0A1B6E4C2   A0A1S3D7P4   A0A224XGT4   A0A336MTV1   A0A336ML06   R4WR93   T1JD07   A0A1D2NCX3   A0A2S2QWH1   C4WWV4   X1WI99   Q172W3   U5EEM2   A0A1W7R7Z8   A0A182MJB7   A0A087T175   A0A182WEU2   A0A164UAJ6   A0A0P6H483   A0A023EMV5   A0A0P6J117   A0A0P6C4F6   A0A0P5D0B2   A0A084W1I9   A0A2M3ZE77  

PDB

2DJ2     E-value=1.05264e-05,     Score=115

KEGG

101742007    no KO assigned | (RefSeq) thioredoxin domain-containing protein 15

GO

GO:0005623   GO:0045454   GO:0016021   GO:0016853   GO:0005515   GO:0051287   GO:0004930   GO:0006420   GO:0004812   GO:0006418   GO:0006334   GO:0003779  

SignalP

Position:   1 - 25,         Likelihood:  0.841054

 

 

Length:

288

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.51211

Exp number, first 60 AAs:

2.14384

Total prob of N-in:

0.72872

inside

1  -  242

TMhelix

243  -  262

outside

263  -  288

 

 

Pi

334.420761

Theta

210.193015

Tajima's D

1.906878

CLR

0.000973

CSRT

0.863656817159142

Interpretation

Uncertain