Gene

KWMTBOMO01487

Pre Gene Modal

BGIBMGA009111

Annotation

PREDICTED:_G_patch_domain_and_ankyrin_repeat-containing_protein_1_homolog_[Papilio_machaon]

Location

Bomo_Chr3(-):12237113-12238439      View in EpiBrowser

Full name

G patch domain and ankyrin repeat-containing protein 1 homolog      

Location in the cell

Nuclear   Reliability : 3.61

CDS

ATGTACAGTAATTTTGTCAGACCAACGACTACGCCTGCTGCAAACCGACATTTTAATTCCAAAGCCTTGAGTGGAGAGGAAGCAAAGAGATTGTATATTGAAGAAATCAAGGGTGCGAAAGACCCCTCACAACTACCACGTGATAAACCACAATCACAACATGTAAATAAAACTAAGACTGTAGAAGAGCCGCGCTTATCGGACAAAGAGCTGTTTCTGACGGTACAAAACAACGATGTAAACACTTTAAAGGCAGTTTTAGACAGGTATCCTGATAAGATAAATAAGATTGACAAGTTTGGATGGAGCTTACTCATGATAGCTTGTCAGGCGAATTCTGTTGAAACAGTTCAGGAGTTACTAGGTCGTGGTGCAGATGTAGATGTCCGAGATAAAGCTGGGAACTCTGCCAGAAGCTTAATCATAAAAAACAAAAACTTTTCACTAGCTAGCATATTTGTTACACATAGAAACAGTATTGAAATACAAAATGTAACTGTAGATGACAGTAAAATGAGAACTAAAGATAAAGAAAAATATTTTTGTGAAACTTGTAGAAATGAATTCCAAGATAAACAAGAACATATGTCTTCCACAATCCATAACATAATGTCGAGTAAACACAGAAAGTTACCTGTGAATTATGTAATACCATCTTCTAACAAGGGCTATCAAATCATGTTAAAAGTTGGTTGGGACAAGGAATCTGGCTTGGGCCCTGATGGTTCTGGTAAAAAATATCCAATCAAAACTGTGCAAAAGAAAGATCGAAAAGGTCTTGGACTAGGTAAAATAAAATTGAAGAATAAAGATGAATGTATGAAGGATACTGATAAAAGAATGACTAAGAAAAGAAAACACATTGAGAGACAATTTGAAGTAAATTTTAGAAGAGAATTTTATTGA

Protein

MYSNFVRPTTTPAANRHFNSKALSGEEAKRLYIEEIKGAKDPSQLPRDKPQSQHVNKTKTVEEPRLSDKELFLTVQNNDVNTLKAVLDRYPDKINKIDKFGWSLLMIACQANSVETVQELLGRGADVDVRDKAGNSARSLIIKNKNFSLASIFVTHRNSIEIQNVTVDDSKMRTKDKEKYFCETCRNEFQDKQEHMSSTIHNIMSSKHRKLPVNYVIPSSNKGYQIMLKVGWDKESGLGPDGSGKKYPIKTVQKKDRKGLGLGKIKLKNKDECMKDTDKRMTKKRKHIERQFEVNFRREFY

Keywords

ANK repeat   Complete proteome   Reference proteome   Repeat  

Feature

chain  G patch domain and ankyrin repeat-containing protein 1 homolog

Uniprot

H9JHW3   A0A2H1WCX1   A0A194RLA9   A0A194Q2M4   I4DNY1   A0A2A4J4C6   + More
A0A0L7K3X3   A0A2J7R3P7   A0A2P8ZA62   A0A067QUY5   A0A1B6J905   A0A1B6GXY1   A0A1B6KS25   V9KXN5   A0A1S3IWH6   A0A240SWU9   A0A151XEF4   A0A2G9RZ55   A0A195BP26   A0A1I8Q577   C3YWN7   A0A195D9V4   B3MEV9   A0A1L8F8H5   A1L1H4   A0A151IFE3   B7Q4W5   A0A0C9R4M1   A0A1W4W0G2   Q0V9D4   V5HQY3   M7CFR0   A0A034VGT3   A0A0L0BTT0   E9J337   A0A3B0J3M3   C1BP04   A0A158NDJ5   A0A0M4EDI6   A0A0Q5VMA6   A0A1X7VST9   A0A026W254   B4J9R9   W8BNI0   B4HS25   B4P893   B4QGF6   E2BKT9   B4KSA2   K7FH77   B5RIL2   Q9V7A7   B4MJT1   A0A0N7ZCF9   A0A154PGR3   A0A2C9M9G3   A0A0K8TZ98   A0A0L7RBB3   Q293C8   W4ZCH1   A0A3P7DT03   A0A1I7Y5N1   H3AHK5   A0A088A2L0   A0A0N5E1X3   A0A0V1MGI8   A0A224Z0A9  

Pubmed

19121390    26354079    22651552    26227816    29403074    24845553    + More
24402279    18563158    17994087    27762356    20431018    25765539    23624526    25348373    26108605    21282665    21347285    18057021    24508170    30249741    24495485    17550304    22936249    20798317    17381049    10731132    12537572    12537569    15562597    15632085    26392177    9215903    28797301   

EMBL

BABH01029603    ODYU01007827    SOQ50925.1    KQ459989    KPJ18618.1    KQ459562    + More
KPI99812.1    AK403192    BAM19621.1    NWSH01003404    PCG66364.1    JTDY01011302    KOB57039.1    NEVH01007818    PNF35464.1    PYGN01000129    PSN53395.1    KK852921    KDR13806.1    GECU01014746    GECU01012015    GECU01001556    JAS92960.1    JAS95691.1    JAT06151.1    GECZ01030002    GECZ01017912    GECZ01002489    JAS39767.1    JAS51857.1    JAS67280.1    GEBQ01025721    JAT14256.1    JW870584    AFP03102.1    CCAG010008041    KQ982254    KYQ58739.1    KV932969    PIO32511.1    KQ976424    KYM88265.1    GG666561    EEN55281.1    KQ981082    KYN09663.1    CH902619    EDV36580.1    CM004480    OCT67902.1    BC129062    AAI29063.1    KQ977830    KYM99398.1    ABJB010035174    DS857852    EEC13887.1    GBYB01002888    GBYB01002890    JAG72655.1    JAG72657.1    AAMC01113405    BC121623    KV461051    AAI21624.1    OCA14963.1    GANP01006196    JAB78272.1    KB515830    EMP39727.1    GAKP01018212    GAKP01018209    GAKP01018204    JAC40743.1    JRES01001351    KNC23452.1    GL768055    EFZ12776.1    OUUW01000001    SPP75905.1    BT076333    ACO10757.1    ADTU01012636    CP012524    ALC41977.1    CH954179    KQS62551.1    KQS62552.1    KK107474    QOIP01000002    EZA50165.1    RLU25615.1    CH916367    EDW01483.1    GAMC01003905    JAC02651.1    CH480816    EDW47972.1    CM000158    EDW91133.1    CM000362    CM002911    EDX07194.1    KMY93962.1    GL448826    EFN83688.1    CH933808    EDW08384.1    AGCU01021437    BT044136    ACH92201.1    AE013599    AY095195    AAM12288.1    CH963846    EDW72370.1    GDRN01067662    JAI64336.1    KQ434899    KZC11033.1    GDHF01032703    GDHF01022241    JAI19611.1    JAI30073.1    KQ414617    KOC68128.1    CM000071    EAL24683.1    AAGJ04112026    UYWW01003321    VDM12653.1    AFYH01219994    JYDO01000105    KRZ70950.1    GFPF01008508    MAA19654.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000037510    UP000235965    + More
UP000245037    UP000027135    UP000085678    UP000092444    UP000075809    UP000078540    UP000095300    UP000001554    UP000078492    UP000007801    UP000186698    UP000078542    UP000001555    UP000192221    UP000008143    UP000031443    UP000037069    UP000268350    UP000005205    UP000092553    UP000008711    UP000007879    UP000053097    UP000279307    UP000001070    UP000001292    UP000002282    UP000000304    UP000008237    UP000009192    UP000007267    UP000000803    UP000007798    UP000076502    UP000076420    UP000053825    UP000001819    UP000007110    UP000270924    UP000095287    UP000008672    UP000005203    UP000046395    UP000054843   

PRIDE

H9JHW3    Q9V7A7   

Pfam

PF12796   Ank_2        + More
PF01585   G-patch
PF13606   Ank_3

Interpro

IPR039146   GPANK1        + More
IPR002110   Ankyrin_rpt       
IPR020683   Ankyrin_rpt-contain_dom       
IPR000467   G_patch_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR036236   Znf_C2H2_sf       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF48403   SSF48403        + More
SSF57667   SSF57667       

Gene 3D

1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9JHW3   A0A2H1WCX1   A0A194RLA9   A0A194Q2M4   I4DNY1   A0A2A4J4C6   + More
A0A0L7K3X3   A0A2J7R3P7   A0A2P8ZA62   A0A067QUY5   A0A1B6J905   A0A1B6GXY1   A0A1B6KS25   V9KXN5   A0A1S3IWH6   A0A240SWU9   A0A151XEF4   A0A2G9RZ55   A0A195BP26   A0A1I8Q577   C3YWN7   A0A195D9V4   B3MEV9   A0A1L8F8H5   A1L1H4   A0A151IFE3   B7Q4W5   A0A0C9R4M1   A0A1W4W0G2   Q0V9D4   V5HQY3   M7CFR0   A0A034VGT3   A0A0L0BTT0   E9J337   A0A3B0J3M3   C1BP04   A0A158NDJ5   A0A0M4EDI6   A0A0Q5VMA6   A0A1X7VST9   A0A026W254   B4J9R9   W8BNI0   B4HS25   B4P893   B4QGF6   E2BKT9   B4KSA2   K7FH77   B5RIL2   Q9V7A7   B4MJT1   A0A0N7ZCF9   A0A154PGR3   A0A2C9M9G3   A0A0K8TZ98   A0A0L7RBB3   Q293C8   W4ZCH1   A0A3P7DT03   A0A1I7Y5N1   H3AHK5   A0A088A2L0   A0A0N5E1X3   A0A0V1MGI8   A0A224Z0A9  

PDB

6H46     E-value=2.17284e-05,     Score=113

KEGG

101742487    no KO assigned | (RefSeq) G patch domain and ankyrin repeat-containing protein 1 homolog

GO

GO:0003676   GO:0008270   GO:0005515   GO:0051287   GO:0004930   GO:0006420   GO:0004812   GO:0006418   GO:0006334   GO:0003779   GO:0016021  

PANTHER

PTHR20923  

Length:

301

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00707999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05411

outside

1  -  301

 

 

Pi

215.446529

Theta

185.992153

Tajima's D

0.498328

CLR

133.97712

CSRT

0.509324533773311

Interpretation

Uncertain