Silkworm Genome Informatics Database

Gene

KWMTBOMO01480

Pre Gene Modal

BGIBMGA009044

Annotation

PREDICTED:_uncharacterized_protein_LOC101743924_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr3(+):12105700-12119872 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.778

CDS

ATGCAATTATTTCATGAGTTAAAACAGAAATATCCAGGTGTTCCTGATCATGTTGTCTCACACACCATTGAGTTGTACGGTCATAACAAACAAGCCTGCGAGACACATCTCCATAGCGAAGTCAAGGCCTCCCTAACTCACGCATACCACGCATCCTCGTCTGCTGCAGCTCGACAGCTCAACCAGCTCAAACTTAACCTTCCTTTAAAGTGCAGAAACCAGCCAATAGTCAAGCATGAAATTGTCAAGTCAACGATTGTAAAATCTCTAACATGTCAAGGACCACAAAAAGCTGTTCTTAGTGCTGATTTAAAAGAACAAGACTGTGAGAACAAAGTGAATACCGACGCAAACCAGAATATTGTTGAAGCCAAAAATGAGGAATTGTTACAACAAATTAATGTGACTCCATCCTCACCCATCACCGTCATAAACATTGATAACTGCTTTGCAAAATACAGTGCTGAATCACCAAGTGATCTGGAACTGACTAACGAAAACAAAGAGGAATTAGTCACTTCCCCTGTACAAGACGAGAAAGTAAATAAACAAGAACAGAAAGTCCCAGATCAACCAGAGAGTACGGGCTACAAGATCTTAAAAAGTTGCAAAATAAAAAGCAATTTAAATGAAAAGCTAGACAAAGGTAGAGAAAAGAAGACTATCAAAAAAGAAGATAAGCCACAAGAGAAACCGAAGCGTCCGAATACACTTGACTTCATAAAACCAAATCCAGATATTGCATTTAAACAAACGTTGAAAGAACCTGAATCTGAGACATGTAGGACAGTGTCTCCCGCACCATCTGCTGCCAAAAATGAAAGTCCCACTAAAGAAGCCAAACCAAATGCGTCATTCAGAACGGAAAGGGGATACCCTGTGAATTTCTCTGTTAATGTAAACTGTCATATGGACCTGAGTCGTGGTTATGGTGATCCTTGGTTAGAAGATTATGATAGCCCCAGAGCAATTACATCTGTCAATCTAACGGTTTGCACTCCTACGTCGAATATGGCGAGTCCTATCAGAGAGTCAAGAGATGATGATGGTGGATTTGAAGGTCATGTCACAGTGACAGTGAGCCCTAGTACAACACGACGAAGGGCACCTCCACCGCCCACACAACAAACTCGAATAGACTCACCACACAGACATTCTCCACGACCATCTCGTCCGGCACCAGAACCACCAGCATCTACTAATGATCGCAACCTCATCGAGCGCCAGAAAGAACGTCTAAATAGGCTCGCAATGGCTTTGAACCAAGAAAAAGGTCGGTTGGCCCAGCTGAGCAAGGAGACCAGTATATTAGCTGGGCCACCGCCCACGCCCTCCTCGGCGCAGCGTCTCCGTGACTACGTGGAGCGCTTACGGGATCAGTGCCACAATCTCGCCAAACGTCTGGAAATGGACGGACGCGAACCAGAAGAATCGAGCAACTTCTACAGGAACATATACACAGGGCAGCGGCCCTCGTCGTCCTGGCAGTGCCACATGTGCACGTTCAGGAACCATCCGCTCCTCGACAAGTGCGAGGAGTGCGAGATGCCCCGGATACTCGTAGTGCGGGCTGCCGATGGGATCACTGTTCGATTGATGCCAGGACGACGAAAAATACCACGATCATGGGTTTTATGA

Protein

MQLFHELKQKYPGVPDHVVSHTIELYGHNKQACETHLHSEVKASLTHAYHASSSAAARQLNQLKLNLPLKCRNQPIVKHEIVKSTIVKSLTCQGPQKAVLSADLKEQDCENKVNTDANQNIVEAKNEELLQQINVTPSSPITVINIDNCFAKYSAESPSDLELTNENKEELVTSPVQDEKVNKQEQKVPDQPESTGYKILKSCKIKSNLNEKLDKGREKKTIKKEDKPQEKPKRPNTLDFIKPNPDIAFKQTLKEPESETCRTVSPAPSAAKNESPTKEAKPNASFRTERGYPVNFSVNVNCHMDLSRGYGDPWLEDYDSPRAITSVNLTVCTPTSNMASPIRESRDDDGGFEGHVTVTVSPSTTRRRAPPPPTQQTRIDSPHRHSPRPSRPAPEPPASTNDRNLIERQKERLNRLAMALNQEKGRLAQLSKETSILAGPPPTPSSAQRLRDYVERLRDQCHNLAKRLEMDGREPEESSNFYRNIYTGQRPSSSWQCHMCTFRNHPLLDKCEECEMPRILVVRAADGITVRLMPGRRKIPRSWVL

Uniprot

H9JHP6 A0A2H1WUU4 A0A194RMH1 A0A194Q483 A0A1E1WK64 A0A2A4JZ24 + More
A0A2A4K0V4 A0A212FBJ8 A0A139WDZ1

Pubmed

19121390 26354079 22118469 18362917 19820115

EMBL

BABH01029612 BABH01029613 BABH01029614 ODYU01010836 SOQ56184.1 KQ459989 + More
KPJ18624.1 KQ459562 KPI99819.1 GDQN01008199 GDQN01003644 JAT82855.1 JAT87410.1 NWSH01000342 PCG77271.1 PCG77272.1 AGBW02009318 OWR51093.1 KQ971357 KYB26139.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000218220 UP000007151 UP000007266 + More

PRIDE

H9JHP6

Interpro

IPR036443 Znf_RanBP2_sf + More
IPR001876 Znf_RanBP2

SUPFAM

SSF90209 SSF90209

ProteinModelPortal

H9JHP6 A0A2H1WUU4 A0A194RMH1 A0A194Q483 A0A1E1WK64 A0A2A4JZ24 + More
A0A2A4K0V4 A0A212FBJ8 A0A139WDZ1

PDB

3A9J E-value=0.000172508, Score=108

KEGG

101743924 no KO assigned | (RefSeq) uncharacterized LOC101743924

GO

GO:0046872 GO:0016301 GO:0008270 GO:0016616 GO:0051287 GO:0004930 GO:0006420 GO:0004812 GO:0006418 GO:0006334 GO:0003779 GO:0016021

Length:

545

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00113

outside

1 - 545

Pi

243.085734

Theta

209.973599

Tajima's D

0.627283

CLR

0.176152

CSRT

0.552822358882056

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics