SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01477  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009043
Annotation
hypothetical_protein_KGM_04603_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.769
 

Sequence

CDS
ATGCTTAGGTTGTACATCGGTCTGCTGGTAGCGATACCGTGTCTAGCTACGAACGGCACAATGACGAAAAACCTAAAAGTATTAGTTTCATCCAACGATTACCCGCCGACCGCGCTGAAATTACTTGAAGATCACTTTACAGTTCTACAGTCAAGGTATTTAAACTTTGGTCAAGAAGGAAGCACGTTAGGCAGAGAAGAGATCCTAAAGCTTATCCCGGGATGTTCAGCTCTAGTTTGGATCTCTAATCTTCCTATAACGAATGAAATCCTTGACGCAGCCGGTGCACAACTGAAGATCGTGAGCACGGTCTCCGCCGGTTACAACCACTGCAACCCCGAGGAGTTGCGCGCGCGGGGTATACAGCTGACGAACACCCCGAACGTCCTGTCCCCGGCCGTTGCAGAGGTTGCCGTGGGGCTCATACTGTCGGCCTCTAGAAGATTCACTGAGAATCTGGATCAAGTACGCAGGTAG
Protein
MLRLYIGLLVAIPCLATNGTMTKNLKVLVSSNDYPPTALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLILSASRRFTENLDQVRR

Summary

Similarity
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
EMBL
BABH01029615    ODYU01010836    SOQ56182.1    NWSH01000342    PCG77274.1    AGBW02009318    + More
OWR51095.1    GAIX01003957    JAA88603.1    KQ459989    KPJ18626.1    KQ459562    KPI99821.1    JTDY01006678    KOB65788.1    GEBQ01001078    JAT38899.1    GALX01003596    JAB64870.1    GEBQ01020728    JAT19249.1    BT127697    AEE62659.1    APGK01058607    KB741291    KB632343    ENN70525.1    ERL93023.1    GECZ01021367    JAS48402.1    KPJ18627.1    GECU01007798    JAS99908.1    GECU01029388    GECU01021282    JAS78318.1    JAS86424.1    LBMM01002888    KMQ94235.1    LJIG01022713    KRT79100.1    GANO01002087    JAB57784.1    KPI99822.1    CM000361    CM002910    EDX05669.1    KMY91228.1    GECU01035153    JAS72553.1    KK852699    KDR18220.1    NEVH01002987    PNF41114.1    AE014134    BT083429    AAN11093.1    ACQ99834.1    AHN54625.1    BT015175    AAT94404.1    CH480833    EDW46392.1    CM000158    KRJ99522.1    EDW90945.1    KRJ99523.1    PNF41115.1    CH963857    EDW76400.2    KQ764772    OAD54394.1    KRF98446.1    GL887695    EGI70401.1    GGMS01015907    MBY85110.1    CP012523    ALC40332.1    GL764539    EFZ17501.1    CH954179    EDV54505.1    KQS61827.1    KQ981905    KYN33334.1    EDW46389.1    EDX05666.1    KMY91221.1    GEBQ01030793    JAT09184.1    AY070510    AAL47981.1    AAO41214.1    ADV37108.1    KMY91226.1    CH902624    EDV33413.2    KRJ99525.1    EDW90947.1    KK118226    KFM72495.1    GEBQ01016827    GEBQ01008316    JAT23150.1    JAT31661.1    KA647362    AFP61991.1    AAF53929.3    AHN54623.1    EDV54507.1    KQ434889    KZC10382.1    BT099559    ACU33951.1    GEBQ01022677    JAT17300.1    KQ980903    KYN11596.1    GL438137    EFN69477.1    GBYX01442508    JAO38882.1    PJQL01002444    RCH84162.1    KMY91222.1    KMY91223.1    KMY91224.1    KMY91225.1    GFDG01000871    JAV17928.1    GFDG01000872    JAV17927.1    KQ982576    KYQ54662.1    KZ303854    PHZ10636.1    GFDG01000877    JAV17922.1    NEVH01004423    PNF39389.1    GECU01019219    JAS88487.1    AAN11092.1    AAO41215.1    AAS64729.2    ADV37106.1    ADV37107.1    AHN54622.1    CH916368    EDW03270.1    KQS61828.1    KRJ99524.1    KQ414620    KOC67667.1    PYGN01000173    PSN52130.1    KQ435811    KOX72911.1    GGFL01002137    MBW66315.1    GECZ01010975    JAS58794.1    ADMH02001646    ETN61602.1    CCYT01000002    CEG64002.1    GECU01012216    JAS95490.1    ADTU01007401    KQ976518    KYM82196.1    GECU01032495    JAS75211.1    GECU01026016    GECU01009194    JAS81690.1    JAS98512.1    NNAY01000187    OXU30171.1    GFWV01008224    MAA32953.1    PCG77275.1    KK107260    QOIP01000001    EZA54065.1    RLU26898.1    CH940649    KRF81511.1    PJQL01000836    RCH92386.1    JH431938    GEBQ01007959    JAT32018.1   
Pfam
PF00389   2-Hacid_dh        + More
PF02826   2-Hacid_dh_C
Interpro
IPR029753   D-isomer_DH_CS        + More
IPR006140   D-isomer_DH_NAD-bd       
IPR006139   D-isomer_2_OHA_DH_cat_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR029752   D-isomer_DH_CS1       
SUPFAM
SSF51735   SSF51735       
PDB
2Q50     E-value=6.82341e-13,     Score=173

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.955747
 
 
Length:
158
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.28909
Exp number, first 60 AAs:
0.95164
Total prob of N-in:
0.06313
outside
1  -  158
 
 

Population Genetic Test Statistics

Pi
219.83979
Theta
179.865063
Tajima's D
1.574918
CLR
0.165934
CSRT
0.80145992700365
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 EMAELAANNIVNGLTGK 100.00 3e-07
20822545 GEWEIGFDKVLGQDLR 100.00 5e-07
20822545 MKPNAVFVNVGR 100.00 0.001
28556443 YLNFGQEGSTLGR 100.00 0.001
28556443 YLNFGQEGSTLGR 100.00 0.001
28556443 VLVSSNDYPPTALK 100.00 0.001
28556443 VLVSSNDYPPTALK 100.00 0.001
20822545 ILEDHFTVLQSR 100.00 0.002
28556443 VLVSSNDYPPTALK 100.00 0.002
28556443 QIYAAGLDVTTPEPLPK 100.00 0.002
28556443 QIYAAGLDVTTPEPLPK 100.00 0.002
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