Gene

KWMTBOMO01476

Pre Gene Modal

BGIBMGA009042

Annotation

PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_[Plutella_xylostella]

Location

Bomo_Chr3(+):12078140-12085290      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.279

CDS

ATGTCACCAAAACGAGTGTTGATTGTCAATGGATCCTATCCCGTTGCCGGCTTGGACATATTCAAAAAGAACAATGTAGAGACAGAAGTGTTTCCTCATATGGACTATGAGCAGGATTTTATGGAAGTTCTGAAGCAGAATCTTAACGGATACGATGGCTTGATCTGGAATACAAAGCACCGACTCACCGCTGAGATCCTCGATTTGGCGGGTCCTCAACTAAAAGCTATATCGGCAATGGCGTCCGGTATAGATAACTTCGACCTGGACGAATTGAAAAAACGTGGTATACCGCTGGGCAATACTCCCAATGTCTTGAACAACGCTGTAGCCGACATCGGTGTTGGTCTCCTCATATCTGCCGCTCGGAAGTTTAAAGAAGGTGTTTCAATGATTGAAAGAAACGAGTGGAAGTTCGGTGTTCAGTGGATATTAGGACAGGATATCGCGGGCAGCACCGTTGGTGTCATCGGTCTGGGTGGTATCGGACAAGCCGTCGTCAGAAGACTGAAAGGTTTCGACGTGTCGAGGTTCTTATACTGCGGGAGATCTGATAAACCTGAAGCGAAGTTATTAGGGGTGGAGCGTGTGCCACTACAAGAACTGCTGGAGGAGAGTGACTTCGTGGTGCTAGTTTGTCCGTTGACCAACGAAACGAGACATTTAATCAACGCTGACACATTGAAGATGATGAAGAAGAACGCTGTATTAGTTAACATCGCACGAGGAGAGATAATAGATCATGTTGCACTTTACGAAGCATTGAAGAACGAGCAGATATTCGCTGCCGGACTGGACGTGGTGTCCCCGGAGCCGATCCCCGCAGACCATCCCTTGCTGGCCTTGCCGAACTGCTATTTAATACCGCATTTAGGCAGCGCGACAATCGAGACAAGAAACAAAATGGCCGTCAACGCGGCGAAAAACATTATTTTAGCATTCGAAGGAAAAAGTATGCTGTACCCTACATATTAA

Protein

MSPKRVLIVNGSYPVAGLDIFKKNNVETEVFPHMDYEQDFMEVLKQNLNGYDGLIWNTKHRLTAEILDLAGPQLKAISAMASGIDNFDLDELKKRGIPLGNTPNVLNNAVADIGVGLLISAARKFKEGVSMIERNEWKFGVQWILGQDIAGSTVGVIGLGGIGQAVVRRLKGFDVSRFLYCGRSDKPEAKLLGVERVPLQELLEESDFVVLVCPLTNETRHLINADTLKMMKKNAVLVNIARGEIIDHVALYEALKNEQIFAAGLDVVSPEPIPADHPLLALPNCYLIPHLGSATIETRNKMAVNAAKNIILAFEGKSMLYPTY

Similarity

Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

Uniprot

H9JHP4   A0A2A4JZ34   A0A2H1WSZ4   A0A194RM74   A0A194Q2N4   S4NNY5   + More
A0A1L8E2R3   A0A240PNC1   A0A2H1WT70   A0A0K8TTH6   A0A1Y1KXC6   A0A1L8E316   B0X7N8   A0A212FBI2   A0A1Q3FF49   A0A182TZI0   Q7PLZ4   A0A182L600   D6WXF3   A0A2M4BUL7   A0A154PEX2   S4PFM5   A0A182VTS2   A0A336MIW7   A0A182Y8E9   A0A182MG47   A0A084VNK2   W5JFL6   A0A2A4K050   A0A1B6EDW6   A0A194Q2P9   A0A182QDU9   A0A0Q9X6A6   B4KL12   A0A182JHA7   A0A026WDB2   E2BAZ5   A0A194RRF7   A0A023ENN7   B4JD97   A0A0N0BF68   A0A1J1IR82   A0A1W4W4J5   A0A195EZN3   A0A182ICN6   B4G728   A0A195DFG0   A0A182JVL5   A0A0A1WQZ5   A0A158P2R5   A0A182F2P3   A0A0L7KWI0   A0A0K8UXH2   A0A0R3NT36   A0A067RDX8   A0A0R3NT84   Q29LX7   A0A310S8D9   N6TMT1   A0A182XCG6   Q17CL4   A0A0P9BRW6   J3JWS9   B3MU86   A0A182NB20   B4Q3V2   T1PEY9   A0A3B0K3J3   A0A3B0K0W2   B3MU85   A0A1I8MBT5   A0A1W4UVU4   A0A0Q9W9Q1   A0A3B0JVU1   A0A0L7R9W9   E2AAM7   A0A1Q3FWM3   A0A2A3ECR6   A0A0Q9WGX7   A0A0R1DQU1   A0A2J7RJU3   A0A0J9R537   B4LUN7   B4JD96   Q9VII9   B4P6J5   A0A1W4UIT6   A0A0Q9WXZ6   A0A0T6AVE0   B4Q3V0   A0A088ACZ2   A0A0R1DQG7   A0A182L602   A0A0J9R5D0   B3NKY3   Q7KT11   B4MV55   A0A0Q5VKN1   B4IFG7   A0A182G4H4  

Pubmed

19121390    26354079    23622113    26369729    28004739    22118469    + More
12364791    14747013    17210077    20966253    18362917    19820115    25244985    24438588    20920257    23761445    17994087    24508170    30249741    20798317    24945155    26483478    25830018    21347285    26227816    15632085    24845553    23537049    17510324    22516182    22936249    25315136    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01029615    NWSH01000342    PCG77275.1    ODYU01010836    SOQ56181.1    KQ459989    + More
KPJ18627.1    KQ459562    KPI99822.1    GAIX01012084    JAA80476.1    GFDF01001165    JAV12919.1    SOQ56182.1    GDAI01000145    JAI17458.1    GEZM01075011    JAV64345.1    GFDF01001199    JAV12885.1    DS232456    EDS42050.1    AGBW02009318    OWR51095.1    GFDL01008884    JAV26161.1    AAAB01008980    EAA14602.5    KQ971361    EFA08834.1    GGFJ01007500    MBW56641.1    KQ434889    KZC10382.1    GAIX01003957    JAA88603.1    UFQS01001296    UFQT01001296    SSX10158.1    SSX29880.1    AXCM01003646    ATLV01014759    KE524984    KFB39546.1    ADMH02001646    ETN61604.1    PCG77274.1    GEDC01027514    GEDC01016543    GEDC01014322    GEDC01001170    JAS09784.1    JAS20755.1    JAS22976.1    JAS36128.1    KPI99821.1    AXCN02000647    CH933807    KRG03413.1    EDW12762.2    KK107260    QOIP01000001    EZA54065.1    RLU26898.1    GL446901    EFN87086.1    KPJ18626.1    JXUM01042370    GAPW01002561    KQ561321    JAC11037.1    KXJ78988.1    CH916368    EDW03270.1    KQ435811    KOX72911.1    CVRI01000055    CRL01017.1    KQ981905    KYN33334.1    APCN01005735    CH479180    EDW29227.1    KQ980903    KYN11596.1    GBXI01013030    GBXI01001597    JAD01262.1    JAD12695.1    ADTU01007401    JTDY01005013    KOB67475.1    GDHF01020942    JAI31372.1    CH379060    KRT04328.1    KK852699    KDR18220.1    KRT04327.1    EAL33917.2    KQ764772    OAD54394.1    APGK01058607    KB741291    KB632343    ENN70525.1    ERL93023.1    CH477307    EAT44083.1    CH902624    KPU74466.1    BT127697    AEE62659.1    EDV33415.1    CM000361    CM002910    EDX05668.1    KMY91227.1    KA647362    AFP61991.1    OUUW01000004    SPP79601.1    SPP79599.1    EDV33414.1    CH940649    KRF81512.1    SPP79600.1    KQ414620    KOC67667.1    GL438137    EFN69477.1    GFDL01003024    JAV32021.1    KZ288285    PBC29490.1    KRF81511.1    CM000158    KRJ99524.1    NEVH01002987    PNF41115.1    KMY91222.1    KMY91223.1    KMY91224.1    KMY91225.1    EDW64223.2    EDW03269.1    AE014134    AY119585    AAF53930.2    AAM50239.1    EDW90947.1    CH963857    KRF98446.1    LJIG01022713    KRT79100.1    EDX05666.1    KMY91221.1    KRJ99525.1    KMY91226.1    CH954179    EDV54506.1    AAN11092.1    AAO41215.1    AAS64729.2    ADV37106.1    ADV37107.1    AHN54622.1    EDW76400.2    KQS61828.1    CH480833    EDW46389.1    JXUM01042371    KXJ78989.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000075885    UP000002320    + More
UP000007151    UP000075902    UP000007062    UP000075882    UP000007266    UP000076502    UP000075920    UP000076408    UP000075883    UP000030765    UP000000673    UP000075886    UP000009192    UP000075880    UP000053097    UP000279307    UP000008237    UP000069940    UP000249989    UP000001070    UP000053105    UP000183832    UP000192223    UP000078541    UP000075840    UP000008744    UP000078492    UP000075881    UP000005205    UP000069272    UP000037510    UP000001819    UP000027135    UP000019118    UP000030742    UP000076407    UP000008820    UP000007801    UP000075884    UP000000304    UP000268350    UP000095301    UP000192221    UP000008792    UP000053825    UP000000311    UP000242457    UP000002282    UP000235965    UP000000803    UP000007798    UP000005203    UP000008711    UP000001292   

PRIDE

H9JHP4    Q9VII9    Q7KT11   

Pfam

PF02826   2-Hacid_dh_C        + More
PF00389   2-Hacid_dh
PF00856   SET
PF01753   zf-MYND

Interpro

IPR006140   D-isomer_DH_NAD-bd        + More
IPR006139   D-isomer_2_OHA_DH_cat_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR036361   SAP_dom_sf       
IPR029753   D-isomer_DH_CS       
IPR011990   TPR-like_helical_dom_sf       
IPR002893   Znf_MYND       
IPR001214   SET_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF48452   SSF48452       

Gene 3D

1.10.720.30     1.25.40.10    

ProteinModelPortal

H9JHP4   A0A2A4JZ34   A0A2H1WSZ4   A0A194RM74   A0A194Q2N4   S4NNY5   + More
A0A1L8E2R3   A0A240PNC1   A0A2H1WT70   A0A0K8TTH6   A0A1Y1KXC6   A0A1L8E316   B0X7N8   A0A212FBI2   A0A1Q3FF49   A0A182TZI0   Q7PLZ4   A0A182L600   D6WXF3   A0A2M4BUL7   A0A154PEX2   S4PFM5   A0A182VTS2   A0A336MIW7   A0A182Y8E9   A0A182MG47   A0A084VNK2   W5JFL6   A0A2A4K050   A0A1B6EDW6   A0A194Q2P9   A0A182QDU9   A0A0Q9X6A6   B4KL12   A0A182JHA7   A0A026WDB2   E2BAZ5   A0A194RRF7   A0A023ENN7   B4JD97   A0A0N0BF68   A0A1J1IR82   A0A1W4W4J5   A0A195EZN3   A0A182ICN6   B4G728   A0A195DFG0   A0A182JVL5   A0A0A1WQZ5   A0A158P2R5   A0A182F2P3   A0A0L7KWI0   A0A0K8UXH2   A0A0R3NT36   A0A067RDX8   A0A0R3NT84   Q29LX7   A0A310S8D9   N6TMT1   A0A182XCG6   Q17CL4   A0A0P9BRW6   J3JWS9   B3MU86   A0A182NB20   B4Q3V2   T1PEY9   A0A3B0K3J3   A0A3B0K0W2   B3MU85   A0A1I8MBT5   A0A1W4UVU4   A0A0Q9W9Q1   A0A3B0JVU1   A0A0L7R9W9   E2AAM7   A0A1Q3FWM3   A0A2A3ECR6   A0A0Q9WGX7   A0A0R1DQU1   A0A2J7RJU3   A0A0J9R537   B4LUN7   B4JD96   Q9VII9   B4P6J5   A0A1W4UIT6   A0A0Q9WXZ6   A0A0T6AVE0   B4Q3V0   A0A088ACZ2   A0A0R1DQG7   A0A182L602   A0A0J9R5D0   B3NKY3   Q7KT11   B4MV55   A0A0Q5VKN1   B4IFG7   A0A182G4H4  

PDB

2Q50     E-value=5.50311e-66,     Score=636

KEGG

101744454    K00049 glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] | (RefSeq) glyoxylate reductase/h

PATHWAY

00260    Glycine, serine and threonine metabolism - Bombyx mori (domestic silkworm)
00620    Pyruvate metabolism - Bombyx mori (domestic silkworm)
00630    Glyoxylate and dicarboxylate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0051287   GO:0016616   GO:0030267   GO:0016618   GO:0008465   GO:0005829   GO:0005576   GO:0008152   GO:0004930   GO:0006420   GO:0004812   GO:0006418   GO:0006334   GO:0003779   GO:0016021   GO:0055114  

Length:

324

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.67913

Exp number, first 60 AAs:

0.0022

Total prob of N-in:

0.05843

outside

1  -  324

 

 

Pi

247.675425

Theta

152.143

Tajima's D

1.887404

CLR

0.43652

CSRT

0.862906854657267

Interpretation

Uncertain