Gene
KWMTBOMO01474
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.74
Sequence
CDS
ATGGAGGAAAAACTTTTCATCGACTTCATTCGGGAAAAATATCCGTCAATCGCGCCCGAATTCGAAGCCTATAGGGCCTCATTTGGTAATTATTCTCCCCCCGCATCTCTCGCCGCCGTCGCCAAACATGCCTCGCAGGCATGCCTCGCGTGCCCCGCCGCCGGTCCGTGTTCAAGCGCACGTACGCACGCCGCCGCCGTAGCGTCTAACGCCCCCGCCCCCGCTGCCCCCGCGCCCGCGTCAATCACGTCAGTTTCGTCCGTCGCGACCTCAATAGCGTCTAGTTCAGGCTCCGATACCGAATCGGAGATGGACTTCGAGTCCGCGACTAGCCCTCAACCCGGAACCTCGGATGGGTTCCAAACTGTAACGCGCGGTAAAAAGCGTACTCGCGTCGTGGAGTCCCGGAGCTCCATGACGAAGCAAACCAAGTCCGCGACCGCCTCCCGACCGCAGGTAGTCGTAACGCCGGAGTCGGACTCCGCCCGCCGCGTAATCCCACCGCCGCGCCCAAAAACCGCGCCCGCGCCTAAAACAGTTGTCCCGCCCCCGCTGATACTCCAGGAGAAGTCAGCGTGGAATCGCGTATCCCAGGCCCTTCAGGCCAACAAAATTAATTATACCCATGCGCGTAACGTCGCGCATGGGATTCAGATTAAGGTCGCAACGCCGGGCGACCATAGGGCCCTCTCTGCTTACCTCCGAAAGGAGAACATAGGTTATCACACCTATGCTCTTCAGGAGGACCGCGAACTCCGCGTAGTGATACGTGGAGTCCCCAAGGAACTCGACATAGACTACGTAAAGGAGGATCTGATCGGTCAGTCCCTCCCAATAATTAGTGTGCACCGGATGCACAGCGGACGCGGCAGACAGCCGTACAATATGATTCTCGTCGCGCTAGAATCAACCCCGGAGGCAAAGAAAAGAATCTCATGTCTCAAAACGATATGCGGCCTCTCCGGGGTCACCATCGAAGCCCCCCATAAACGTGGTACTCCCGGGCAGTGCCACAGGTGCCAGCTCTATGGCCACTCAGCGCGTAATTGCCACGCGCGCCCCCGCTGCGTGAAATGCCTCGGCGATCACGCAACCACAGAATGTTCGCGTGTTAGGGAAACCGCGACGGAACCCCCAAGCTGTGTCCTATGCCTTAAGCAAGGGCACCCGGCAAACTACCGCGGATGTCCTAGGGCTCCGCGTAAACGCCTGAACCACCCAGCCCTCCGAACCGTCGACCCAAAGACTTCGGCGCCTTCAGTGCCGAAACCAGCCTTCGTACCGGCTGCGGTTCCCACCGTCTCGGCGTGGAAAAAACCGCTGCCGTATACGAAGGAGGGAACACAAAACGTACCCCAGCTCCCGCCTGCGACACGTCACGCGCCTCAGCCCCTGCTCGCACCTCGCCCCGCGCCCGCGTACCGCCCCCCGCAACCCTCAGTCGTCAACGACTTCGCGCTCGTGCGCGACTTCGTCACCGCGGTAAACTTTGACCGTCTGCGATCGTTCGCAGATGCTATCCGTAGGTCGGTAACCCCCGAACAGCGGCTCGCGGCCGCTTTCGATCACATGGACGTCTACGAGTCCGTGTCTCGCACGTTATAA
Protein
MEEKLFIDFIREKYPSIAPEFEAYRASFGNYSPPASLAAVAKHASQACLACPAAGPCSSARTHAAAVASNAPAPAAPAPASITSVSSVATSIASSSGSDTESEMDFESATSPQPGTSDGFQTVTRGKKRTRVVESRSSMTKQTKSATASRPQVVVTPESDSARRVIPPPRPKTAPAPKTVVPPPLILQEKSAWNRVSQALQANKINYTHARNVAHGIQIKVATPGDHRALSAYLRKENIGYHTYALQEDRELRVVIRGVPKELDIDYVKEDLIGQSLPIISVHRMHSGRGRQPYNMILVALESTPEAKKRISCLKTICGLSGVTIEAPHKRGTPGQCHRCQLYGHSARNCHARPRCVKCLGDHATTECSRVRETATEPPSCVLCLKQGHPANYRGCPRAPRKRLNHPALRTVDPKTSAPSVPKPAFVPAAVPTVSAWKKPLPYTKEGTQNVPQLPPATRHAPQPLLAPRPAPAYRPPQPSVVNDFALVRDFVTAVNFDRLRSFADAIRRSVTPEQRLAAAFDHMDVYESVSRTL
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
534
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00035
outside
1 - 534
Population Genetic Test Statistics
Pi
17.416339
Theta
46.767992
Tajima's D
1.477042
CLR
0
CSRT
0.784860756962152
Interpretation
Uncertain
