Gene

KWMTBOMO01472

Pre Gene Modal

BGIBMGA009041

Annotation

PREDICTED:_zinc_finger_HIT_domain-containing_protein_1-like_[Plutella_xylostella]

Location

Bomo_Chr3(+):11938507-11943881      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.43

CDS

ATGACCTCACGCGAATCTGGAAGAGTCAAAGATGCCGAGAGAAGAAAGGTTTTGGATGATGTGGCGAGAAAACGTCGAGCGAGAAAAGCAGTTGAGGCCCTAGAACAAGATAACTTTCATGAAGACCCACATGCAGATTTAGTTATGTCAAAGAAGGTGCCGAAATTCGCAGACTCTAATGAGAAACCAACTAGGAAGAAGAAGTCTAAAAGCGCTGAATATTATAAGATGCGATTTCGGAAAACGTTTGCGCAGCTGGTAGAAGAGGATGCAAGTTTTAGATCAAAACCTCCTAACTACTTGTCCGCACAAGCGCCACCTTCTAAATTTCCCGAGCGACATTTCTGTGCTGTTTGTGGGTTTCCATCGAATTACACATGTATACCATGTGGTGCTAGATATTGTAGTGTAAAGTGTCTCGGAACTCACTTGGATACGCGATGCCTCAAATGGACTGCTTAA

Protein

MTSRESGRVKDAERRKVLDDVARKRRARKAVEALEQDNFHEDPHADLVMSKKVPKFADSNEKPTRKKKSKSAEYYKMRFRKTFAQLVEEDASFRSKPPNYLSAQAPPSKFPERHFCAVCGFPSNYTCIPCGARYCSVKCLGTHLDTRCLKWTA

Uniprot

I4DL74   A0A194RMH6   A0A212F1G6   A0A1E1WDC9   S4P469   A0A2A4JZ27   + More
A0A2H1V543   A0A0M8ZTW9   A0A0L7R3M6   A0A1B6MER6   A0A1B6ENX2   A0A088ABH6   A0A026WML9   E2AL74   A0A2A3E758   A0A158NVT0   A0A0C9RDM4   A0A0L7LQJ6   E2BCQ1   A0A232EMQ0   K7IXL9   A0A1B6C4W7   A0A195EWT8   A0A310SDT4   A0A154PDZ3   E9J6Y6   A0A195C5H5   A0A151IYN6   A0A067RGJ5   E0VKS7   A0A1B0FY74   A0A0P6GGQ6   A0A0P5T8V4   E9GAJ2   A0A1L8DD75   A0A182MKE0   A0A182W9X1   Q16KR7   A0A182QMA2   A0A2M4AV74   A0A2M4C223   A0A182P0J1   A0A182JQG2   U5ELL8   W5JPV9   A0A182F683   A0A182NLK9   A0A2M3ZJ66   A0A023EHL3   A0A182J924   A0A0K8TQG4   A0A182UUN2   A0A182TMF0   A0A182L2B9   Q7Q3F7   A0A182IEM4   A0A0N8BNM7   A0A0P5SJH2   A0A0P4VZR1   A0A182WTG4   A0A0P6GYE8   A0A1J1I690   A0A0P6I598   A0A1S3DF67   A0A2J7Q951   A0A1Q3FBJ7   A0A0P6C0L9   A0A1Q3FB85   A0A1I8NDI7   H9JHP3   A0A182R395   A0A1S4K3N6   A0A1I8P250   B7Q2A2   V5IK36   T1JN43   W8BNE1   A0A293LKB6   A0A1D2NJ64   C4WXA8   A0A2S2PZS8   B3N4E0   A0A1A9X0S0   A0A1B0A5U0   A0A1E1WX82   Q29L11   B4GSI1   A0A023GF74   G3MMS8   A0A0P5E781   B3MP89   T1FNL5   A0A0A1WXK3   A0A2P2HYZ1   A0A2C9JV80   A0A3B0JM57   A0A1Q3FBC7   A0A2S2NCA6   A0A0K8VLN9  

Pubmed

22651552    26354079    22118469    23622113    24508170    30249741    + More
20798317    21347285    26227816    28648823    20075255    21282665    24845553    20566863    21292972    17510324    20920257    23761445    24945155    26369729    20966253    12364791    14747013    17210077    25315136    19121390    25765539    24495485    27289101    17994087    28503490    15632085    22216098    23254933    25830018    15562597   

EMBL

AK402042    KQ459562    BAM18664.1    KPI99824.1    KQ459989    KPJ18629.1    + More
AGBW02010885    OWR47579.1    GDQN01006089    JAT84965.1    GAIX01006124    JAA86436.1    NWSH01000342    PCG77265.1    ODYU01000507    SOQ35394.1    KQ435878    KOX69896.1    KQ414663    KOC65438.1    GEBQ01005595    JAT34382.1    GECZ01030139    JAS39630.1    KK107152    QOIP01000007    EZA57158.1    RLU20692.1    GL440492    EFN65829.1    KZ288347    PBC27548.1    ADTU01027489    GBYB01006410    JAG76177.1    JTDY01000317    KOB77722.1    GL447336    EFN86561.1    NNAY01003318    OXU19630.1    AAZX01000038    GEDC01028747    JAS08551.1    KQ981940    KYN32688.1    KQ762520    OAD55772.1    KQ434885    KZC10061.1    GL768402    EFZ11417.1    KQ978231    KYM96102.1    KQ980745    KYN13681.1    KK852699    KDR18234.1    DS235250    EEB13983.1    AJVK01032622    GDIQ01033390    JAN61347.1    GDIP01129411    LRGB01002019    JAL74303.1    KZS09613.1    GL732537    EFX83254.1    GFDF01009804    JAV04280.1    AXCM01007919    CH477941    EAT34901.1    EAT34904.1    AXCN02000614    GGFK01011366    MBW44687.1    GGFJ01010198    MBW59339.1    GANO01001350    JAB58521.1    ADMH02000676    ETN65348.1    GGFM01007833    MBW28584.1    GAPW01005254    JAC08344.1    GDAI01001001    JAI16602.1    AAAB01008964    EAA12182.2    APCN01005209    GDIQ01160043    JAK91682.1    GDIQ01103513    JAL48213.1    GDRN01084034    GDRN01084033    JAI61566.1    GDIQ01039240    JAN55497.1    CVRI01000038    CRK93913.1    GDIQ01016689    JAN78048.1    NEVH01016943    PNF25109.1    GFDL01010153    JAV24892.1    GDIP01007709    JAM96006.1    GFDL01010200    JAV24845.1    BABH01029631    ABJB010541540    DS842727    EEC12973.1    GANP01000372    JAB84096.1    JH431661    GAMC01015335    GAMC01015333    GAMC01015331    JAB91224.1    GFWV01003551    GFWV01021304    MAA28281.1    LJIJ01000027    ODN05252.1    ABLF02028600    AK342535    BAH72528.1    GGMS01001823    MBY71026.1    CH954177    EDV57810.1    GFAC01007539    JAT91649.1    CH379061    EAL33013.1    CH479189    EDW25340.1    GBBM01002876    JAC32542.1    JO843179    AEO34796.1    GDIP01151763    JAJ71639.1    CH902620    EDV32208.1    AMQM01007187    KB097579    ESN94005.1    GBXI01010946    JAD03346.1    IACF01001283    LAB66995.1    OUUW01000006    SPP81933.1    GFDL01010188    JAV24857.1    GGMR01002225    MBY14844.1    GDHF01031202    GDHF01031118    GDHF01015158    GDHF01012824    JAI21112.1    JAI21196.1    JAI37156.1    JAI39490.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000218220    UP000053105    UP000053825    + More
UP000005203    UP000053097    UP000279307    UP000000311    UP000242457    UP000005205    UP000037510    UP000008237    UP000215335    UP000002358    UP000078541    UP000076502    UP000078542    UP000078492    UP000027135    UP000009046    UP000092462    UP000076858    UP000000305    UP000075883    UP000075920    UP000008820    UP000075886    UP000075885    UP000075881    UP000000673    UP000069272    UP000075884    UP000075880    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840    UP000076407    UP000183832    UP000079169    UP000235965    UP000095301    UP000005204    UP000075900    UP000095300    UP000001555    UP000094527    UP000007819    UP000008711    UP000091820    UP000092445    UP000001819    UP000008744    UP000007801    UP000015101    UP000076420    UP000268350   

PRIDE

H9JHP3   

Pfam

PF04438   zf-HIT        + More
PF06331   Tfb5

Interpro

IPR007529   Znf_HIT        + More
IPR039723   Vps71/ZNHIT1       
IPR009400   TFIIH_TTDA/Tfb5       
IPR035935   TFB5-like_sf       

SUPFAM

SSF142897   SSF142897       

Gene 3D

3.30.70.1220    

ProteinModelPortal

I4DL74   A0A194RMH6   A0A212F1G6   A0A1E1WDC9   S4P469   A0A2A4JZ27   + More
A0A2H1V543   A0A0M8ZTW9   A0A0L7R3M6   A0A1B6MER6   A0A1B6ENX2   A0A088ABH6   A0A026WML9   E2AL74   A0A2A3E758   A0A158NVT0   A0A0C9RDM4   A0A0L7LQJ6   E2BCQ1   A0A232EMQ0   K7IXL9   A0A1B6C4W7   A0A195EWT8   A0A310SDT4   A0A154PDZ3   E9J6Y6   A0A195C5H5   A0A151IYN6   A0A067RGJ5   E0VKS7   A0A1B0FY74   A0A0P6GGQ6   A0A0P5T8V4   E9GAJ2   A0A1L8DD75   A0A182MKE0   A0A182W9X1   Q16KR7   A0A182QMA2   A0A2M4AV74   A0A2M4C223   A0A182P0J1   A0A182JQG2   U5ELL8   W5JPV9   A0A182F683   A0A182NLK9   A0A2M3ZJ66   A0A023EHL3   A0A182J924   A0A0K8TQG4   A0A182UUN2   A0A182TMF0   A0A182L2B9   Q7Q3F7   A0A182IEM4   A0A0N8BNM7   A0A0P5SJH2   A0A0P4VZR1   A0A182WTG4   A0A0P6GYE8   A0A1J1I690   A0A0P6I598   A0A1S3DF67   A0A2J7Q951   A0A1Q3FBJ7   A0A0P6C0L9   A0A1Q3FB85   A0A1I8NDI7   H9JHP3   A0A182R395   A0A1S4K3N6   A0A1I8P250   B7Q2A2   V5IK36   T1JN43   W8BNE1   A0A293LKB6   A0A1D2NJ64   C4WXA8   A0A2S2PZS8   B3N4E0   A0A1A9X0S0   A0A1B0A5U0   A0A1E1WX82   Q29L11   B4GSI1   A0A023GF74   G3MMS8   A0A0P5E781   B3MP89   T1FNL5   A0A0A1WXK3   A0A2P2HYZ1   A0A2C9JV80   A0A3B0JM57   A0A1Q3FBC7   A0A2S2NCA6   A0A0K8VLN9  

PDB

6GEN     E-value=0.012193,     Score=85

KEGG

101744930    K11663 zinc finger HIT domain-containing protein 1 | (RefSeq) zinc finger HIT domain-containing prot

GO

GO:0046872   GO:0043486   GO:0031063   GO:0031491   GO:0042826   GO:0000812   GO:0006289   GO:0000439   GO:0006355   GO:0005634   GO:0005737   GO:0005700  

PANTHER

PTHR13093  

Length:

153

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00788

Exp number, first 60 AAs:

0

Total prob of N-in:

0.40711

outside

1  -  153

 

 

Pi

208.961355

Theta

205.94803

Tajima's D

0.09418

CLR

0

CSRT

0.392680365981701

Interpretation

Uncertain