SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01466
Pre Gene Modal
BGIBMGA008935
Annotation
PREDICTED:_uncharacterized_protein_LOC105842389_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.653 Mitochondrial   Reliability : 1.008 Nuclear   Reliability : 1.25
 

Sequence

CDS
ATGTATTTACATAAGCTTTATAGAAAATACGGGATATTCACAACGCGCCTTGCAGCTTTATTGGTGCTGCATGCAGCCGGGGCAGGATATGCTTCACCTACAGTCCTCGTCACCAGACCTCTAACTAGGGTAGTCGAGTGGCTGCCCACTGACAACCAAACAGTTTACAGACTTGACGAAGGCGAAACACGAAGCTTAGAGCTGAACACCTCAACAATATCACAAACTACAGTTTATATAACGGTCAGTCCGTGTACTAGTGACTTGAACTGGATTTTATATCGAGGCACCGCCAATCCTCCTGGTCACTTAAGTCCTCTGAGACAAAACAAAGGCTCCGAAGTCACTACGGTTTCGCTTGAAATCTCACAGTATGACAGATACATACTCCAGTTGTCGACGGCGAAAGGCGGTTCGTGTGTGGTGAGCGCCCGCGGTGAAGCACCCAGACAAGTCCGGCTGCGTCTCAAGATCCGATCGAGGCGGAAGCTTGCTGCTAACTGGGATTCCAGGTACAATCCTCCTAGAGCAACGATAACCTTTTCTATTGCTTACTAG
Protein
MYLHKLYRKYGIFTTRLAALLVLHAAGAGYASPTVLVTRPLTRVVEWLPTDNQTVYRLDEGETRSLELNTSTISQTTVYITVSPCTSDLNWILYRGTANPPGHLSPLRQNKGSEVTTVSLEISQYDRYILQLSTAKGGSCVVSARGEAPRQVRLRLKIRSRRKLAANWDSRYNPPRATITFSIAY

Summary

Pfam
PF10179   DUF2369
Interpro
IPR019326   NDNF        + More
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR013783   Ig-like_fold       
SUPFAM
SSF49265   SSF49265       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 31,         Likelihood:  0.588944
 
 
Length:
185
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
17.0991
Exp number, first 60 AAs:
17.02274
Total prob of N-in:
0.77808
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  34
outside
35  -  185
 
 

Population Genetic Test Statistics

Pi
24.208793
Theta
24.997909
Tajima's D
0.008078
CLR
1.745671
CSRT
0.380580970951452
Interpretation
Uncertain
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