SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01465
Pre Gene Modal
BGIBMGA008938
Annotation
PREDICTED:_trypsin-1-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.536
 

Sequence

CDS
ATGGTACCCACCTGGGATTCGAACACCGTGGCGGACGTGGAGTGCGGCGTGGACGTGGCGAGGACTGCTCGAATCGTCGGTGGCGTTGACAGCTTACCGGCCGAATTCCCGTGGACTGCCAGTATATGGCGTCAAGGAACGCATCAGTGTGGGGCGACCGTCATCAATGACAGATGGCTGTTGACAGCTGGCCACTGCGTTTGCAGTGTATTTGACGAGTTCTACAGAACAAAGCAACTGTCAGTTGTGGTTGGGTACACGGATATCTCATCCAGAGACGACAGCGAGCCGCTGTCCAAGATTATACCACATCCGGATTACCAATGCAACAAGAAATCCAATGACGTGGCCCTCTTGAAGACAGCGAGGAGGTTACAGTGGTCCTCGGAACTGAGACCAGCTTGTCTACCAAAATTCTTGTCTGAAGACTTTAGTGGATCCCTGGCTACTGTAGCCGGTTGGGGATTTACTGATGAGAACAGAAACGAGGGGGATCGATCCAACATACTCCAAAAGACAGAAGTGACAGTGGTCACAAACGATCAATGCAACCAATGGTATCAATCACAGGGCAGCAAAGTTAAGATTATTCCTACCCAAATGTGCGCTGGCTATGAAAACGGGGGAAGAGACTCCTGCTGGGCCGATAGCGGCGGTCCTCTTATGGTGAGAGACGACAAAAAGCACACAATGGTTGTCGGAGTTGTATCAACAGGCAGTGGTTGCGCGCGTCCAAAGTTGCCAGGCGTCTATACCAGAGTCTCGAGGTATACAGATTGGATCGTCCAAAGTATATCCAATGAGAATTCCAGATCCGGTTTAAGTTGGTATCCCAGATTCGGATGA
Protein
MVPTWDSNTVADVECGVDVARTARIVGGVDSLPAEFPWTASIWRQGTHQCGATVINDRWLLTAGHCVCSVFDEFYRTKQLSVVVGYTDISSRDDSEPLSKIIPHPDYQCNKKSNDVALLKTARRLQWSSELRPACLPKFLSEDFSGSLATVAGWGFTDENRNEGDRSNILQKTEVTVVTNDQCNQWYQSQGSKVKIIPTQMCAGYENGGRDSCWADSGGPLMVRDDKKHTMVVGVVSTGSGCARPKLPGVYTRVSRYTDWIVQSISNENSRSGLSWYPRFG

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01012429    ODYU01004225    SOQ43878.1    NWSH01002115    PCG69130.1    PCG69129.1    + More
KZ149902    PZC78490.1    KQ459989    KPJ18634.1    KQ459562    KPI99830.1    AGBW02009998    OWR49370.1    ACPB03007549    FX985334    BAX07347.1    NEVH01000641    PNF43141.1    GBHO01026927    JAG16677.1    GDHC01008113    JAQ10516.1    KK852549    KDR21542.1    PYGN01001804    PSN32730.1    KQ434899    KZC10846.1    LRGB01002544    KZS07184.1    GDIQ01113992    JAL37734.1    GDIP01226003    JAI97398.1    KQ766607    OAD53608.1    GDIP01084235    JAM19480.1    GDIQ01025102    JAN69635.1    GDIP01190148    JAJ33254.1    GL451478    EFN79272.1    GDIP01108550    JAL95164.1    GL887888    EGI69685.1    KQ981906    KYN33249.1    GL441840    EFN64185.1    KQ971319    EFA01296.2    KQ982548    KYQ55206.1    NNAY01001583    OXU23529.1    GDIP01034240    JAM69475.1    KQ976424    KYM88402.1    KJ512086    AID60309.1    KQ977600    KYN01577.1    ADTU01012890    ADTU01012891    ADTU01012892    GL732580    EFX74803.1    AAAB01008987    JXJN01010041    JXJN01010042    APCN01000860    CCAG010020780    GDIP01072114    JAM31601.1    JRES01000836    KNC27889.1    EAA01098.5    GBXI01014024    JAD00268.1    AXCN02001179    GDIQ01107673    JAL44053.1    KQ981153    KYN08898.1    GDIQ01166028    JAK85697.1    GDIP01021108    JAM82607.1    CH916366    EDV98012.1    AXCM01008432    ATLV01025724    KE525398    KFB52580.1    GDIP01035600    JAM68115.1    KZS07182.1    CH964101    EDW79383.1    CH902618    EDV41006.2    GDIP01089118    JAM14597.1    CP012525    ALC44428.1    CH480834    EDW46548.1    BT124788    ADF80703.1    CM002912    KMZ00451.1    GGFJ01007971    MBW57112.1    GGFJ01007844    MBW56985.1    CH954178    EDV52294.2    AE014296    AFH04496.1    ADMH02001070    ETN64181.1    KMZ00452.1    CM000363    EDX10996.1    CM000159    EDW95411.1    CH379069    EAL30997.3    GGFJ01007222    MBW56363.1    OUUW01000002    SPP76190.1    CH940647    EDW70369.2    AJVK01006239    AJVK01006240    CH479188    EDW40453.1    GDIP01206720    JAJ16682.1    CH933809    EDW19777.2   
Pfam
PF00089   Trypsin
Interpro
IPR018114   TRYPSIN_HIS        + More
IPR001254   Trypsin_dom       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR033116   TRYPSIN_SER       
IPR013783   Ig-like_fold       
IPR036179   Ig-like_dom_sf       
SUPFAM
SSF50494   SSF50494        + More
SSF48726   SSF48726       
Gene 3D
PDB
6O1G     E-value=1.18535e-35,     Score=374

Ontologies

Topology

Length:
281
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0064
Exp number, first 60 AAs:
0.00094
Total prob of N-in:
0.04901
outside
1  -  281
 
 

Population Genetic Test Statistics

Pi
31.63778
Theta
31.842729
Tajima's D
-0.629972
CLR
1.647112
CSRT
0.214989250537473
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号