Gene

KWMTBOMO01464

Pre Gene Modal

BGIBMGA008934

Annotation

PREDICTED:_protein_msta?_isoform_B_[Bombyx_mori]

Location

Bomo_Chr3(+):11523813-11528606      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.635 Nuclear   Reliability : 1.894

CDS

ATGCCGTGCGTCGGTTGTTACAAATCCGTTTTCACCGATGTCGGCGAACGCTGTGCCAAGTGCGGTTGGCCAGTCTGCTCCGGGAACTGTCCCGGTCTCAGAGATCCAAAGCACCATAAGCTCGAGTGCGATATCCTGGGCTTAAGGCCAGATTGCGTATTGGATAATATGGCTGATTACTATAGACACGACGCTTTGTTAGCTTTGAGGTGTCTTCTACTGCAGAAAGCCGATGCAGCTAAATGGCAGCATTTGTTAGAGATGCAATCACATATGGAATGTAGGATACCTGGCACCCAGGCTTTTGATGAAGCGGATGAGTTCATTGTGGAATACCTCATCAAAAATTTCTTATCAAAACTAGACAGCGGTATGAAGAAAGACATACCGGATATATCGGCGAATCTGATACATAGAATCTGTGGTATTATCGACACAAACGCCATAGAAATTCGTTTGGTAGACGGTGTAGAACTACAAGCACTATACACAAAAACATGCATTCTAGAACATAGCTGCTTACCTAACACGAAATTCAATTTCGATCTATCAACGAGAAATAAAGATGATTTATACAAAATATCTGTTAAAATCGTAACGCCAATTACCAAACATGAGCATATATCCACAATGTATAGTCACGCATTATGGGGCACACAAGCCAGACGGCAACATTTAAAAGACACAAAATACTTTTCGTGCAAATGCTGTAGATGCAGCGATCCCACCGAGCTCGGTACTTATTTAAGCGCTATGAAATGTCTCGGCGATGAGAATAAGCCGTGCGAAGGTATCCATTTACCCGAAGATCCTTTAGATGACGAAACAGAATGGGCGTGCAGCAATTGTGACGTTAAAATCAGTAATTCTCAAGTTTGTTGTGTTATATCACAGATGCAGGACGAAGTCGATAACGTATTAATGATGGGCGGCGATGTTACTGTACTAGAAAACGCATTATGTCGTTTATCAACATTTTTGCATCAAAATCACTATCATTTATACTCAATAAAACATTCTCTAGTACAACTTTATGGTCGGCAGCTTGCATACGCTTCCCAAGAATATTTAGAAAAGAAAATTAAAATGTGTAATGATCTAATAGATATCACGAATACCTTAGATCCTGGTAATGCAAGACTAAGTCTGTACAATAGCGTTTTACATCATGAGTTACATTTGGCTTTGGTGATGATGTCTAAAAAAGCTAATATAGACGGTAGTATAAAAAATGTTGACACGATCGTACCGGTATTAAGAGAAGCAAAAAAGGCCTTAAACATATCTTTGGAGTGCCTTAAAGATGATATCGAAGAAGCTTCTGGAAAGAAATTATACGAAGTCATTGAACAGAGTAATAGGGAGTTCGAAAGATATTGTAAAGAAAAAAATGTTATTTTGTAA

Protein

MPCVGCYKSVFTDVGERCAKCGWPVCSGNCPGLRDPKHHKLECDILGLRPDCVLDNMADYYRHDALLALRCLLLQKADAAKWQHLLEMQSHMECRIPGTQAFDEADEFIVEYLIKNFLSKLDSGMKKDIPDISANLIHRICGIIDTNAIEIRLVDGVELQALYTKTCILEHSCLPNTKFNFDLSTRNKDDLYKISVKIVTPITKHEHISTMYSHALWGTQARRQHLKDTKYFSCKCCRCSDPTELGTYLSAMKCLGDENKPCEGIHLPEDPLDDETEWACSNCDVKISNSQVCCVISQMQDEVDNVLMMGGDVTVLENALCRLSTFLHQNHYHLYSIKHSLVQLYGRQLAYASQEYLEKKIKMCNDLIDITNTLDPGNARLSLYNSVLHHELHLALVMMSKKANIDGSIKNVDTIVPVLREAKKALNISLECLKDDIEEASGKKLYEVIEQSNREFERYCKEKNVIL

Uniprot

H9JHD7   A0A194Q2Q9   A0A2A4JCH5   A0A212F6K8   A0A2W1BTU3   A0A2H1VST6   + More
A0A2A4JAY6   A0A194RMS8   A0A0L7L4V5   A0A2W1BTZ8   A0A1Y1KK94   A0A1Y1KQ70   A0A0T6BBR2   A0A1Y1KKP4   V5G4W8   A0A1W4WTY4   N6T8K1   A0A1Y1KMY6   A0A1Y1KHV1   D6WX49   A0A2J7PII1   A0A1A9XIF2   A0A067RH17   A0A1B0G722   A0A1B0B1W6   A0A1A9V1T5   A0A1B0AG97   A0A0K8UXH9   W8CAF4   T1P800   A0A1I8MM12   A0A1Y1KHW2   J3JUL3   A0A1I8P5Y0   A0A0L0BTQ6   A0A1Y1KNJ9   A0A1B6LEU4   A0A182HX38   A0A084WCA5   U4ULW8   A0A336MXR6   A0A336MVI7   A0A1B6IZ88   E0VE70   A0A1S4H3U2   A0A182GYU7   A0A1S3D951   A0A1S4F4K3   A0A182XA70   A0A1B6KC82   Q17FS1   A0A182Q160   A0A182PVE0   A0A182F434   A0A182JPK7   N6U4N0   A0A182YE57   A0A1J1IJV9   A0A1B6K5C8   A0A182ND77   A0A336N0L6   W5JHI3   A0A182W8A1   A0A1B6CVY0   A0A182R8Y6   Q8T3Z4   A0A1W4V515   A0A336MRF6   B0W8E2   A0A146M7C9   A0A182M6V3   B4H733   Q28WQ7   B3LXC6   B4LIK5   A0A3B0JKY9   B4QCR5   B3N3F8   A0A0J9R683   B4MR47   A0A1B6F8L2   A0A1B6F8I4   B4J499   A0A1B6CIE1   A0A0M4E4X4   B4KLY8   B4NYV1   A0A1B6G5A2   A0A1B6ERY1   A0A0K8VCZ8   A0A0R1DU67   A0A2H8TSY9   J9JNT3   A0A2R7VQF4   A0A0K8TJU6   A0A2A3E0W6   B4II36   A0A0A9ZDR1  

Pubmed

19121390    26354079    22118469    28756777    26227816    28004739    + More
23537049    18362917    19820115    24845553    24495485    25315136    22516182    26108605    24438588    20566863    12364791    26483478    17510324    25244985    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26823975    17994087    15632085    22936249    17550304    25401762   

EMBL

BABH01012429    KQ459562    KPI99831.1    NWSH01002115    PCG69132.1    AGBW02009998    + More
OWR49371.1    KZ149902    PZC78488.1    ODYU01004225    SOQ43879.1    PCG69131.1    KQ459989    KPJ18635.1    JTDY01002909    KOB70502.1    PZC78489.1    GEZM01083758    JAV61028.1    GEZM01083759    JAV61027.1    LJIG01002195    KRT84745.1    GEZM01083756    JAV61031.1    GALX01003376    JAB65090.1    APGK01040103    KB740975    KB632267    ENN76549.1    ERL90994.1    GEZM01083761    JAV61025.1    GEZM01083757    JAV61029.1    KQ971361    EFA08044.2    NEVH01025126    PNF16150.1    KK852475    KDR23072.1    CCAG010003762    JXJN01007356    GDHF01021023    JAI31291.1    GAMC01001349    JAC05207.1    KA644687    KA649136    AFP59316.1    GEZM01083755    JAV61032.1    BT126928    AEE61890.1    JRES01001352    KNC23381.1    GEZM01083760    JAV61026.1    GEBQ01017933    JAT22044.1    APCN01005127    ATLV01022619    KE525334    KFB47849.1    ERL90995.1    UFQT01002994    SSX34411.1    SSX34412.1    GECU01015461    JAS92245.1    DS235088    EEB11676.1    AAAB01008849    JXUM01098191    JXUM01098192    JXUM01098193    JXUM01098194    KQ564401    KXJ72339.1    GEBQ01030908    JAT09069.1    CH477268    EAT45430.1    AXCN02002291    ENN76550.1    CVRI01000053    CRK99828.1    GECU01001058    JAT06649.1    UFQS01003040    UFQT01003040    SSX15103.1    SSX34483.1    ADMH02001505    ETN62264.1    GEDC01019642    JAS17656.1    AE013599    AY089424    AAF57282.2    AAL90162.1    UFQS01001909    UFQT01001909    SSX12688.1    SSX32131.1    DS231858    EDS38871.1    GDHC01002948    JAQ15681.1    AXCM01000199    CH479216    EDW33566.1    CM000071    EAL26610.2    CH902617    EDV42770.1    CH940648    EDW60375.1    OUUW01000001    SPP73311.1    CM000362    EDX05854.1    CH954177    EDV59840.1    CM002911    KMY91697.1    CH963849    EDW74586.1    GECZ01023202    JAS46567.1    GECZ01023289    JAS46480.1    CH916367    EDW00579.1    GEDC01024064    JAS13234.1    CP012524    ALC41204.1    CH933808    EDW10777.1    CM000157    EDW89802.2    GECZ01012162    JAS57607.1    GECZ01029063    JAS40706.1    GDHF01015495    JAI36819.1    KRJ98720.1    GFXV01004513    MBW16318.1    ABLF02036487    KK854004    PTY09051.1    GBRD01000376    JAG65445.1    KZ288469    PBC25357.1    CH480841    EDW49562.1    GBHO01002126    JAG41478.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000053240    UP000037510    + More
UP000192223    UP000019118    UP000030742    UP000007266    UP000235965    UP000092443    UP000027135    UP000092444    UP000092460    UP000078200    UP000092445    UP000095301    UP000095300    UP000037069    UP000075840    UP000030765    UP000009046    UP000069940    UP000249989    UP000079169    UP000076407    UP000008820    UP000075886    UP000075885    UP000069272    UP000075881    UP000076408    UP000183832    UP000075884    UP000000673    UP000075920    UP000075900    UP000000803    UP000192221    UP000002320    UP000075883    UP000008744    UP000001819    UP000007801    UP000008792    UP000268350    UP000000304    UP000008711    UP000007798    UP000001070    UP000092553    UP000009192    UP000002282    UP000007819    UP000242457    UP000001292   

PRIDE

H9JHD7    Q8T3Z4   

Pfam

PF00856   SET        + More
PF01753   zf-MYND
PF01509   TruB_N

Interpro

IPR017896   4Fe4S_Fe-S-bd        + More
IPR001214   SET_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR002893   Znf_MYND       
IPR020103   PsdUridine_synth_cat_dom_sf       
IPR002501   PsdUridine_synth_N       

SUPFAM

SSF55120   SSF55120       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JHD7   A0A194Q2Q9   A0A2A4JCH5   A0A212F6K8   A0A2W1BTU3   A0A2H1VST6   + More
A0A2A4JAY6   A0A194RMS8   A0A0L7L4V5   A0A2W1BTZ8   A0A1Y1KK94   A0A1Y1KQ70   A0A0T6BBR2   A0A1Y1KKP4   V5G4W8   A0A1W4WTY4   N6T8K1   A0A1Y1KMY6   A0A1Y1KHV1   D6WX49   A0A2J7PII1   A0A1A9XIF2   A0A067RH17   A0A1B0G722   A0A1B0B1W6   A0A1A9V1T5   A0A1B0AG97   A0A0K8UXH9   W8CAF4   T1P800   A0A1I8MM12   A0A1Y1KHW2   J3JUL3   A0A1I8P5Y0   A0A0L0BTQ6   A0A1Y1KNJ9   A0A1B6LEU4   A0A182HX38   A0A084WCA5   U4ULW8   A0A336MXR6   A0A336MVI7   A0A1B6IZ88   E0VE70   A0A1S4H3U2   A0A182GYU7   A0A1S3D951   A0A1S4F4K3   A0A182XA70   A0A1B6KC82   Q17FS1   A0A182Q160   A0A182PVE0   A0A182F434   A0A182JPK7   N6U4N0   A0A182YE57   A0A1J1IJV9   A0A1B6K5C8   A0A182ND77   A0A336N0L6   W5JHI3   A0A182W8A1   A0A1B6CVY0   A0A182R8Y6   Q8T3Z4   A0A1W4V515   A0A336MRF6   B0W8E2   A0A146M7C9   A0A182M6V3   B4H733   Q28WQ7   B3LXC6   B4LIK5   A0A3B0JKY9   B4QCR5   B3N3F8   A0A0J9R683   B4MR47   A0A1B6F8L2   A0A1B6F8I4   B4J499   A0A1B6CIE1   A0A0M4E4X4   B4KLY8   B4NYV1   A0A1B6G5A2   A0A1B6ERY1   A0A0K8VCZ8   A0A0R1DU67   A0A2H8TSY9   J9JNT3   A0A2R7VQF4   A0A0K8TJU6   A0A2A3E0W6   B4II36   A0A0A9ZDR1  

PDB

4YND     E-value=0.00283106,     Score=97

KEGG

101744430    no KO assigned | (RefSeq) protein msta, isoform B

GO

GO:0046872   GO:0006396   GO:0001522   GO:0009982   GO:0003723   GO:0008168   GO:0042826   GO:0010629  

Length:

467

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000970000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00477

outside

1  -  467

 

 

Pi

213.254148

Theta

135.352935

Tajima's D

0.888511

CLR

0.169874

CSRT

0.629818509074546

Interpretation

Uncertain