Gene

KWMTBOMO01457

Pre Gene Modal

BGIBMGA008931

Annotation

PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr3(+):10972960-10985429      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.659

CDS

ATGAATAGGCGTTGGTCTCATGGTTCCGATTTGAAGGCTCTGTGCTCCGAAGCGGTGTTGAAGGCGCTGAGGCGTGTCTACCCACAAGTCTACGAGAGTGAATATGCATTGCTTATTGACGCTAAAAATGTGGAAGTGAGCAAGCAAGACATGTTGGAGGCGATGCGCAGCCTGGTGGCGGCCGGCGCCCGCAGCAGTCCGCCGGCGGCGCGCCGCCTGCCCGCGCACAGCGAGCCGCTGCTGCACGCCCAGCTCGACGCCGCTATGCACGTGCTCAGGAACGTCTTCCCGCACCACACTGACTCCGAGAAGAGGATTAGTGGTTCACTATCGTCGAGTGCCATGTTGATAACAGGCGAATGTGCTGAGACGCATTTAGCTCCAGCCCTGTTGGCGCAGTTGGAGCACTGCACCGTGAAGGAACTCAGTATGTCAACTTTACATTCAGCGCACACTTTCACTCAAGAGCAGGCTTTGATATCGGTATTCTCAGAGTGTCGTCGCGCGGACCGCGGCTGCGTGTTGTACGTGCGCGACGTGGCGGCGGTGTGGGCGTCCCTCGCACCCGGGCCGGGCGGGGCGCTGCTGCTGCAACTGTGGCGCGCCCGGGCCGCCGGGGACGACACTCTGCTGCTCGCCACTTCGTCGGTACAGCACGACGAGCTGCCACAAGAGATACAAGAACTGTTCCCGCTGCACAAGGAGTGCGTGTACCGCGTGCGCGAGCCGAACGCGTCCGAAGTGCTGTCGTTCTTCGAGCCGATCTTAGCCGAAGCGCTGTTAGATCCACCTCCGATCGAAAACAATGAGCCGCCACCTCCATTGCCTAGAGCACCTCCCCCTCCCCCTCCACGTGAAAGCGAAGAAGAGGTGTCGCGGCGAAAACGCAAGGAGGACTACAAGTTGCGGGAGCTGAGGATATTCCTGCGCGACATATGCAGGAAGCTCGCTTCGAACAGACGCTTTTACAAGTTCACTAAGCCCGTTGATTTGGAAGAGGTAACAGACTATTTACACATCATTAAGCAACCCATGGACCTAGAGACGATGATGACCAAGGTCGACCTGCACAAATATAACTGCGCCAAGGAATTCCTCGATGACATCGATTTGATATGCGCGAACGCCTTGGAGTACAACCCTGATAGAACGTCGTCCGACAAGCAGATCCGTCACGAGGCGTGCTCGCTGCGGGACCACGCGCACGCGCTCATCGACGTGGAGATGGACAGCGACTTCGAGCTGGAGTGCCAGGAGATTGCGAAGCGACGCCGCGACGAGGGGAACGAGGCCGAGGACCTGCCCGACTTTATATACACCGCTTCGAATCTACCACAAGGCTTGGATTCGCTGCTCAACAATGACGACAGTAAATCACCGCGGACTCCTCAGAATGGAGACAAAGAAGCGCATTCGGCGAAACGTAAACGCAGACGCATGAACGCGTGGTCTAAAGGTTTGGTGGCTAAAAGACCGAAGACGCAGAAGAGTTTAAAGGACCAAAGCGTGCTGGGCGTCACGGATGAGGAGTGCAAAGAGAACAAGCCGGTGACGTCGACGCCGCTCCCAAACGGCTCCCCCTCCCCCTCCTCCTCCAGTTCCGGCTCCGACGACGACGTGCCGCTGCGGCGGCCGCGCCACGACGCCGACACCATGTGCAACATTACCGTGCGACACAACCACGTTATCGAGAGTCCAACAAAGTCAACAGAGAAACCTTCGACTAAAACATCACCAAAGAAAAGAAATTCGGGAACCGAGGCCGCGAGTGGAGATGCAGAGAAAGTACTGATCAATAAGACTGAATTAAAAAATGTTGTATTTATGAACGCGAAGGCCCTGAGGTATATCGGACTGAGCGCGTTGCTGGACTTGCACTCGCAACTGACCAAGATTGTACGAGAATATTCAAACAAATACGACAGAACTAAACTACCGCAAGAAATGAGTAAAGTCATCGCTAGGTACGTGCAGCTACTCGAAAAAGCTGGACTGTCGACAGCAATGCTGGCGGTAGTAATAAAATTAATAACCCTCAAAACCCCTTAA

Protein

MNRRWSHGSDLKALCSEAVLKALRRVYPQVYESEYALLIDAKNVEVSKQDMLEAMRSLVAAGARSSPPAARRLPAHSEPLLHAQLDAAMHVLRNVFPHHTDSEKRISGSLSSSAMLITGECAETHLAPALLAQLEHCTVKELSMSTLHSAHTFTQEQALISVFSECRRADRGCVLYVRDVAAVWASLAPGPGGALLLQLWRARAAGDDTLLLATSSVQHDELPQEIQELFPLHKECVYRVREPNASEVLSFFEPILAEALLDPPPIENNEPPPPLPRAPPPPPPRESEEEVSRRKRKEDYKLRELRIFLRDICRKLASNRRFYKFTKPVDLEEVTDYLHIIKQPMDLETMMTKVDLHKYNCAKEFLDDIDLICANALEYNPDRTSSDKQIRHEACSLRDHAHALIDVEMDSDFELECQEIAKRRRDEGNEAEDLPDFIYTASNLPQGLDSLLNNDDSKSPRTPQNGDKEAHSAKRKRRRMNAWSKGLVAKRPKTQKSLKDQSVLGVTDEECKENKPVTSTPLPNGSPSPSSSSSGSDDDVPLRRPRHDADTMCNITVRHNHVIESPTKSTEKPSTKTSPKKRNSGTEAASGDAEKVLINKTELKNVVFMNAKALRYIGLSALLDLHSQLTKIVREYSNKYDRTKLPQEMSKVIARYVQLLEKAGLSTAMLAVVIKLITLKTP

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JHD4   A0A2A4K6L4   A0A2W1BVW9   A0A2H1WPQ0   A0A194Q3B5   A0A212EXV0   + More
A0A1Y1K0M5   A0A1Y1K0Q9   A0A1Y1K4L1   A0A1Y1K8F7   A0A1Y1K0W0   A0A1Y1K5T9   A0A1B6F931   A0A0C9QJW8   A0A0P4VSC8   A0A1W4XEY6   A0A195FG10   A0A154P0C8   A0A0C9QVG3   A0A224XIG4   A0A1B6LR67   A0A3L8E4C7   A0A026WJC4   A0A195EDK7   F4WQ18   K7J5Z7   E2B2M3   A0A0L7RGD7   A0A2A3ER96   A0A2H8TX01   J9JLH2   A0A0P4W5G5   A0A2S2NKH4   A0A3P8TJN4   M4A3D6   A0A2S2QBP8   A0A315WCN5   A0A1A7W888   A0A087YM38   A0A3P9H4L5   A0A3P9H547   A0A3P9MIZ0   A0A3P9LAR9   H2LP49   A0A3B3I3Y4   T1HBK9   A0A3B3YK56   A0A3B3UMW6   A0A3P9BHI7   A0A3P8QRS1   H2V6Y8   A0A1A8UQ17   A0A1A8CEP6   A0A1A8ATX6   A0A3B3DPX0   A0A3B3DPZ5   A0A1A7ZPK1   A0A1A8BFC7   A0A1A8MNU0   A0A1A8LZX9   A0A1A8CY32   R4GBP6   A0A146Y477   G1KJ60   A0A1A8GSL0   A0A1A8HRI7   A0A1A8PX90   A0A1A8IVI8   A0A1A8F2J8   A0A3B5AR87   G5E7I7   G1NMP1   T1JSZ7   A0A1D5PXZ4   A0A1D5PKC7   K7FUG4   G3NQA1   A0A1U7S716   R0LWQ5   A0A151PIR4   U3IYE6   A0A2I0MU40   A0A1V4JNE8   U3JG47   I3JJY8   A0A3Q0H1U1   A0A151MXR5   A0A1U7SAR3   W5LD33   A0A3B4UB48   A0A3B4UBV2   A0A1L8FZX9  

Pubmed

19121390    28756777    26354079    22118469    28004739    27129103    + More
30249741    24508170    21719571    20075255    20798317    23542700    29703783    17554307    25186727    21551351    29451363    20838655    15592404    17381049    22293439    23749191    23371554    25329095    27762356   

EMBL

BABH01012466    BABH01012467    NWSH01000123    PCG79312.1    KZ149902    PZC78481.1    + More
ODYU01010092    SOQ54956.1    KQ459562    KPI99838.1    AGBW02011677    OWR46322.1    GEZM01096209    JAV55054.1    GEZM01096204    JAV55059.1    GEZM01096203    JAV55060.1    GEZM01096206    JAV55057.1    GEZM01096210    JAV55053.1    GEZM01096208    JAV55055.1    GECZ01023021    JAS46748.1    GBYB01003814    JAG73581.1    GDKW01001226    JAI55369.1    KQ981610    KYN39328.1    KQ434791    KZC05376.1    GBYB01007709    JAG77476.1    GFTR01008587    JAW07839.1    GEBQ01013746    JAT26231.1    QOIP01000001    RLU27517.1    KK107168    EZA56127.1    KQ979074    KYN22929.1    GL888262    EGI63716.1    GL445190    EFN90045.1    KQ414599    KOC69791.1    KZ288195    PBC33792.1    GFXV01006972    MBW18777.1    ABLF02020778    ABLF02020788    GDRN01085829    JAI61282.1    GGMR01005071    MBY17690.1    GGMS01005747    MBY74950.1    NHOQ01000034    PWA33619.1    HADW01000349    SBP01749.1    AYCK01000093    ACPB03005112    HAEJ01009703    SBS50160.1    HADZ01014361    SBP78302.1    HADY01020117    SBP58602.1    HADY01006297    SBP44782.1    HADZ01001400    SBP65341.1    HAEF01017077    SBR58236.1    HAEF01010275    SBR50068.1    HADZ01020012    SBP83953.1    GCES01037938    JAR48385.1    HAEC01006080    SBQ74157.1    HAED01001979    SBQ87824.1    HAEI01003751    SBR85848.1    HAED01014907    SBR01352.1    HAEB01005797    SBQ52324.1    CAEY01000468    AADN05000843    AGCU01055446    AGCU01055447    AGCU01055448    AGCU01055449    AGCU01055450    AGCU01055451    AGCU01055452    AGCU01055453    AGCU01055454    AGCU01055455    KB742629    EOB06215.1    AKHW03000178    KYO48883.1    ADON01027599    ADON01027600    AKCR02000002    PKK33189.1    LSYS01006902    OPJ73634.1    AGTO01000827    AGTO01010947    AERX01010366    AERX01010367    AKHW03004704    KYO29238.1    CM004476    OCT77145.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000192223    UP000078541    + More
UP000076502    UP000279307    UP000053097    UP000078492    UP000007755    UP000002358    UP000008237    UP000053825    UP000242457    UP000007819    UP000265080    UP000002852    UP000028760    UP000265200    UP000265180    UP000001038    UP000015103    UP000261480    UP000261500    UP000265160    UP000265100    UP000005226    UP000261560    UP000001646    UP000261400    UP000001645    UP000015104    UP000000539    UP000007267    UP000007635    UP000189705    UP000050525    UP000016666    UP000053872    UP000190648    UP000016665    UP000005207    UP000018467    UP000261420    UP000186698   

PRIDE

H9JHD4   

Pfam

PF00439   Bromodomain        + More
PF00004   AAA
PF17862   AAA_lid_3
PF00084   Sushi
PF01416   PseudoU_synth_1
PF00057   Ldl_recept_a
PF00089   Trypsin
PF15396   FAM60A
PF00046   Homeodomain
PF18387   zf_C2H2_ZHX

Interpro

IPR027417   P-loop_NTPase        + More
IPR036427   Bromodomain-like_sf       
IPR003959   ATPase_AAA_core       
IPR001487   Bromodomain       
IPR018359   Bromodomain_CS       
IPR041569   AAA_lid_3       
IPR003593   AAA+_ATPase       
IPR003960   ATPase_AAA_CS       
IPR023415   LDLR_class-A_CS       
IPR000436   Sushi_SCR_CCP_dom       
IPR020095   PsdUridine_synth_TruA_C       
IPR009003   Peptidase_S1_PA       
IPR020103   PsdUridine_synth_cat_dom_sf       
IPR018114   TRYPSIN_HIS       
IPR001406   PsdUridine_synth_TruA       
IPR001254   Trypsin_dom       
IPR020097   PsdUridine_synth_TruA_a/b_dom       
IPR035976   Sushi/SCR/CCP_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR041708   PUS1/PUS2-like       
IPR036055   LDL_receptor-like_sf       
IPR031252   ANCCA       
IPR026065   FAM60A       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR009057   Homeobox-like_sf       
IPR041057   ZHX_Znf_C2H2       
IPR001356   Homeobox_dom       

SUPFAM

SSF47370   SSF47370        + More
SSF52540   SSF52540       
SSF57424   SSF57424       
SSF55120   SSF55120       
SSF50494   SSF50494       
SSF57535   SSF57535       
SSF57667   SSF57667       
SSF46689   SSF46689       

Gene 3D

1.20.920.10     3.30.70.660     4.10.400.10    

CDD

cd00112  LDLa
cd00033  CCP
cd02568  PseudoU_synth_PUS1_PUS2
cd00190  Tryp_SPc
cd00086  homeodomain

ProteinModelPortal

H9JHD4   A0A2A4K6L4   A0A2W1BVW9   A0A2H1WPQ0   A0A194Q3B5   A0A212EXV0   + More
A0A1Y1K0M5   A0A1Y1K0Q9   A0A1Y1K4L1   A0A1Y1K8F7   A0A1Y1K0W0   A0A1Y1K5T9   A0A1B6F931   A0A0C9QJW8   A0A0P4VSC8   A0A1W4XEY6   A0A195FG10   A0A154P0C8   A0A0C9QVG3   A0A224XIG4   A0A1B6LR67   A0A3L8E4C7   A0A026WJC4   A0A195EDK7   F4WQ18   K7J5Z7   E2B2M3   A0A0L7RGD7   A0A2A3ER96   A0A2H8TX01   J9JLH2   A0A0P4W5G5   A0A2S2NKH4   A0A3P8TJN4   M4A3D6   A0A2S2QBP8   A0A315WCN5   A0A1A7W888   A0A087YM38   A0A3P9H4L5   A0A3P9H547   A0A3P9MIZ0   A0A3P9LAR9   H2LP49   A0A3B3I3Y4   T1HBK9   A0A3B3YK56   A0A3B3UMW6   A0A3P9BHI7   A0A3P8QRS1   H2V6Y8   A0A1A8UQ17   A0A1A8CEP6   A0A1A8ATX6   A0A3B3DPX0   A0A3B3DPZ5   A0A1A7ZPK1   A0A1A8BFC7   A0A1A8MNU0   A0A1A8LZX9   A0A1A8CY32   R4GBP6   A0A146Y477   G1KJ60   A0A1A8GSL0   A0A1A8HRI7   A0A1A8PX90   A0A1A8IVI8   A0A1A8F2J8   A0A3B5AR87   G5E7I7   G1NMP1   T1JSZ7   A0A1D5PXZ4   A0A1D5PKC7   K7FUG4   G3NQA1   A0A1U7S716   R0LWQ5   A0A151PIR4   U3IYE6   A0A2I0MU40   A0A1V4JNE8   U3JG47   I3JJY8   A0A3Q0H1U1   A0A151MXR5   A0A1U7SAR3   W5LD33   A0A3B4UB48   A0A3B4UBV2   A0A1L8FZX9  

PDB

3LXJ     E-value=5.30614e-38,     Score=398

KEGG

101744578    K22531 ATPase family AAA domain-containing protein 2 [EC:3.6.1.-] | (RefSeq) ATPase family AAA domai

GO

GO:0005524   GO:0003723   GO:0009982   GO:0004252   GO:0001522   GO:0006355   GO:0016887   GO:0006325   GO:0031936   GO:0003682   GO:0045944   GO:0005634   GO:0042393   GO:0070577   GO:0005654   GO:0003677   GO:0005515   GO:0004814   GO:0005737   GO:0006420   GO:0004812   GO:0006418   GO:0006334   GO:0003779   GO:0016021  

PANTHER

PTHR23069:SF4  

Subcellular location

Nucleus  

Length:

682

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.71666

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05493

outside

1  -  682

 

 

Pi

161.058284

Theta

154.611862

Tajima's D

-0.922675

CLR

105.016855

CSRT

0.150942452877356

Interpretation

Uncertain