Gene

KWMTBOMO01448  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008946

Annotation

PREDICTED:_uncharacterized_protein_KIAA0556_[Bombyx_mori]

Location

Bomo_Chr3(-):10889367-10896539      View in EpiBrowser

Full name

Protein KIAA0556      

Location in the cell

Extracellular   Reliability : 2.037

CDS

ATGATTCTCTTCACTAAAGATCCTCTAATCCTAGAAGCGGTTATGGATAACGACAAGAATTTCAAAGTATTACTCAAAGATAGCGAACCGATGACAGATCCTAGTGCAATTGACAAGCGACCGACGACAGCTAATGATAGCCACCACAACTTGAGCCCTAATGCTTTGCTCGACTCTTTAGAGGATAATGAGAGAGAAGCCAAATATATGGCAAAGGAAATTAAACTGACGCTCATGTCGAACTGGGGTCAGAAGAATTTGATCGGGCTAACTGGTATCGAAATTCTTTACAACGATGACCCGATCGTAGTGCGCAGAGCTTACGCGTATTCGACCTTCATAAACTCAGCCCAAAACTCCGACGCCCTTGACACGGTGGAGTGCTCGGCGCTGTTCAACGCGAGGAACATTACGACTGATCACGAGGACATGTGGTGCGCGAGCTTCTCGGCCGACACCAAGTTCTGTCATGTCGTCATCCAACTCGCAGAACCTACCGAGATTACAAGCATCCGAATATGGAACTACAACGCGAATATGGAGCTGTCGTACATGGGGGCGAAGCACCTCAGGGTTAGTCTGGACGGGTCAGAGCTGCACTACAGGCCGGTGTTGCTGCGCCGCGCGCCCGGACACGCCCACTACGACTACGTGCAGCAACTGGACCTGGCCTCCGTCGACGACAGATTCGAAGACGCCAAGGACTCGGACAGTTTCCGCATGGACTGTCTGGTGTACGGCACCAACTTGGACATGGGCGCGCCCACCGGCTTTGTGCTGCAGCTGAACATATTCTCGACCTGGGGCGACCCCTACTACGTCGGCCTGACCGGGATACAGCTGTACGACCCCCGCGGGAACCTCGTGCCGGTCACGCAGACCAACGTCTGCGCTCATCCGGCCAGCGTGAACGTGCTCGATTCTAGGGCATTAGACGTGCGGACTCCGGACAAGCTTATCGACGGTAACAATGACAGTGTCGGTGACGGGGCGCACTCGTGGCTCGCCCCGCTACTGCCCAATACGCTTAACAGGGTGTTTTTCGTGTTCGACATCCCGGTCTCAGTCTACGGGCTCAAGATATGGAACTACGGGAAGACGCCGTCGAGGGGCGTTAAGGAATTTGGGGCAAGTTGTGTTTTCTTTTGCGGGGCAACAAACCTGTAG

Protein

MILFTKDPLILEAVMDNDKNFKVLLKDSEPMTDPSAIDKRPTTANDSHHNLSPNALLDSLEDNEREAKYMAKEIKLTLMSNWGQKNLIGLTGIEILYNDDPIVVRRAYAYSTFINSAQNSDALDTVECSALFNARNITTDHEDMWCASFSADTKFCHVVIQLAEPTEITSIRIWNYNANMELSYMGAKHLRVSLDGSELHYRPVLLRRAPGHAHYDYVQQLDLASVDDRFEDAKDSDSFRMDCLVYGTNLDMGAPTGFVLQLNIFSTWGDPYYVGLTGIQLYDPRGNLVPVTQTNVCAHPASVNVLDSRALDVRTPDKLIDGNNDSVGDGAHSWLAPLLPNTLNRVFFVFDIPVSVYGLKIWNYGKTPSRGVKEFGASCVFFCGATNL

Description

May influence the stability of microtubules (MT), possibly through interaction with the MT-severing katanin complex.

Subunit

Interacts with microtubules. Interacts with 4 subunits of the katanin complex: KATNA1, KATNAL1, KATNB1 and KATNBL1.

Keywords

Alternative splicing   Cell projection   Coiled coil   Complete proteome   Cytoplasm   Cytoskeleton   Phosphoprotein   Reference proteome   Ciliopathy   Joubert syndrome   Polymorphism  

Feature

chain  Protein KIAA0556
splice variant  In isoform 2.
sequence variant  In dbSNP:rs12930355.

Uniprot

H9JHE9   A0A2H1WA06   A0A2W1BZ06   A0A2A4K5L3   A0A194Q3C0   A0A194RMJ2   + More
A0A212FLY4   E9JC92   A0A195C1M3   T1J5N1   A0A026VVE0   A0A1B6E268   A0A195EYW6   A0A151I0K5   A0A1Y1KKU6   E2AZU8   A0A195DFB1   A0A151XI58   D6WX80   A0A0J7KV36   A0A1W2W901   A0A224XCF2   H2YAI6   H9F618   M3YNC4   G1TBY0   A0A2Y9LAK4   A0A2Y9L7X9   Q8C753-3   L5MAV8   I3MWA4   O60303   G7Q0T0   E2BRZ4   A0A1B6L386   A0A2I3TD79   A0A1A8L7C3   A0A2U3ZCP8   F6XQI1   B2RXY0   Q8C753   A0A2K5QW20   A0A2K5I8U9   A0A2J8TJP6   A0A2K5WZI1   H2NQH4   A0A2J8JMH0   A0A2J8JMF4   A0A2K5WZJ2   A0A2K6NZU7   A0A2K6KCF1   A0A0G2JYJ4   K7B706   K7BEC1   H2QAT8   K7DDP3   A0A2K6A810   K7C292   A0A0D9R269   A0A096NHJ4   F7IAJ4   A0A2I3MNJ0   U3FB86   A0A2K6KCG3   A0A2K6KCE7   U3B7Z3   U3C8U3   F7IKT4   A0A096NHJ5   F6Q0R7   F1LX85   G7NQF9   F6Q0P7   A0A2R9B9B8   A0A2K6BFF0   A0A2U3XRK7   A0A2R9B9B3   U6DU27   G3I4F5   A0A2I2ZQF5   A0A2K6BFB9   A0A2K6BFC6   A0A2R9BGY0   G3RLM2   A0A2K5LPX2   A0A1B6F342   A0A2K5LQ20   A0A3P8ZV48   A0A2K5LPY0   A0A3P8Y2B0   A0A3Q0J0Z4   A0A2K6SF15   A0A3P8ZVF8   A0A3P8Y3K6   W5MML5   A0A1U7Q5N8  

Pubmed

19121390    28756777    26354079    22118469    21282665    24508170    + More
28004739    20798317    18362917    19820115    25319552    21993624    19468303    16141072    15489334    12693553    21183079    26714646    9628581    12168954    15616553    18669648    23186163    22002653    16136131    25362486    15057822    15632090    22673903    25243066    17431167    22722832    21804562    22398555    25069045    26319212   

EMBL

BABH01012473    BABH01012474    BABH01012475    ODYU01007282    SOQ49919.1    KZ149902    + More
PZC78477.1    NWSH01000123    PCG79316.1    KQ459562    KPI99843.1    KQ459989    KPJ18644.1    AGBW02007683    OWR54758.1    GL771776    EFZ09559.1    KQ978344    KYM94774.1    JH431866    KK107796    EZA47600.1    GEDC01005307    JAS31991.1    KQ981905    KYN33321.1    KQ976609    KYM79311.1    GEZM01080836    JAV62029.1    GL444277    EFN61077.1    KQ980903    KYN11583.1    KQ982091    KYQ60093.1    KQ971361    EFA08803.2    LBMM01002800    KMQ94347.1    GFTR01006359    JAW10067.1    JU326321    AFE70077.1    AEYP01082333    AEYP01082334    AAGW02073867    AAGW02073868    AC002551    AC008732    AC016597    AC092330    AK052492    AK052528    BC030902    BC042743    AK122309    KB102349    ELK35415.1    AGTP01031055    AGTP01031056    AGTP01031057    AGTP01031058    AGTP01031059    AB011128    AC025275    BC150276    CM001295    EHH60268.1    GL450107    EFN81510.1    GEBQ01021876    JAT18101.1    AACZ04059636    AACZ04059637    AACZ04059638    HAEF01003338    SBR40720.1    AC127333    AC150648    BC158019    AAI58020.1    NDHI03003494    PNJ33194.1    AQIA01042477    AQIA01042478    AQIA01042479    AQIA01042480    AQIA01042481    AQIA01042482    ABGA01096663    ABGA01096664    ABGA01096665    ABGA01096666    ABGA01096667    ABGA01096668    ABGA01096669    ABGA01096670    ABGA01096671    ABGA01096672    NBAG03000444    PNI23965.1    PNI23962.1    AABR07071984    AC122963    CH473956    EDM17504.1    GABC01001464    JAA09874.1    GABD01004524    JAA28576.1    GABE01006015    JAA38724.1    GABF01001701    JAA20444.1    AQIB01118608    AQIB01118609    AQIB01118610    AQIB01118611    AQIB01118612    AQIB01118613    AQIB01118614    AHZZ02018553    AHZZ02018554    GAMR01000937    JAB32995.1    GAMT01009624    JAB02237.1    GAMS01001243    JAB21893.1    JSUE03025972    JSUE03025973    JSUE03025974    CM001272    EHH31537.1    AJFE02022921    AJFE02022922    AJFE02022923    AJFE02022924    AJFE02022925    AJFE02022926    AJFE02022927    AJFE02022928    AJFE02022929    AJFE02022930    HAAF01014643    CCP86465.1    JH001246    EGV92281.1    CABD030099932    CABD030099933    CABD030099934    CABD030099935    CABD030099936    CABD030099937    CABD030099938    CABD030099939    CABD030099940    GECZ01025139    JAS44630.1    AHAT01013675   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000078542    + More
UP000053097    UP000078541    UP000078540    UP000000311    UP000078492    UP000075809    UP000007266    UP000036403    UP000007875    UP000000715    UP000001811    UP000248482    UP000000589    UP000005215    UP000005640    UP000009130    UP000008237    UP000002277    UP000245340    UP000233040    UP000233080    UP000233100    UP000001595    UP000233200    UP000233180    UP000002494    UP000233140    UP000029965    UP000028761    UP000008225    UP000006718    UP000240080    UP000233120    UP000245341    UP000001075    UP000001519    UP000233060    UP000265140    UP000079169    UP000233220    UP000018468    UP000189706   

PRIDE

H9JHE9    Q8C753    O60303    F6XQI1    F1LX85    G3I4F5    + More

Pfam

PF14652   DUF4457

Interpro

IPR027859   DUF4457        + More
IPR026704   KIAA0556       

ProteinModelPortal

H9JHE9   A0A2H1WA06   A0A2W1BZ06   A0A2A4K5L3   A0A194Q3C0   A0A194RMJ2   + More
A0A212FLY4   E9JC92   A0A195C1M3   T1J5N1   A0A026VVE0   A0A1B6E268   A0A195EYW6   A0A151I0K5   A0A1Y1KKU6   E2AZU8   A0A195DFB1   A0A151XI58   D6WX80   A0A0J7KV36   A0A1W2W901   A0A224XCF2   H2YAI6   H9F618   M3YNC4   G1TBY0   A0A2Y9LAK4   A0A2Y9L7X9   Q8C753-3   L5MAV8   I3MWA4   O60303   G7Q0T0   E2BRZ4   A0A1B6L386   A0A2I3TD79   A0A1A8L7C3   A0A2U3ZCP8   F6XQI1   B2RXY0   Q8C753   A0A2K5QW20   A0A2K5I8U9   A0A2J8TJP6   A0A2K5WZI1   H2NQH4   A0A2J8JMH0   A0A2J8JMF4   A0A2K5WZJ2   A0A2K6NZU7   A0A2K6KCF1   A0A0G2JYJ4   K7B706   K7BEC1   H2QAT8   K7DDP3   A0A2K6A810   K7C292   A0A0D9R269   A0A096NHJ4   F7IAJ4   A0A2I3MNJ0   U3FB86   A0A2K6KCG3   A0A2K6KCE7   U3B7Z3   U3C8U3   F7IKT4   A0A096NHJ5   F6Q0R7   F1LX85   G7NQF9   F6Q0P7   A0A2R9B9B8   A0A2K6BFF0   A0A2U3XRK7   A0A2R9B9B3   U6DU27   G3I4F5   A0A2I2ZQF5   A0A2K6BFB9   A0A2K6BFC6   A0A2R9BGY0   G3RLM2   A0A2K5LPX2   A0A1B6F342   A0A2K5LQ20   A0A3P8ZV48   A0A2K5LPY0   A0A3P8Y2B0   A0A3Q0J0Z4   A0A2K6SF15   A0A3P8ZVF8   A0A3P8Y3K6   W5MML5   A0A1U7Q5N8  

KEGG

101738056    K22858 protein JBTS26 | (RefSeq) uncharacterized protein KIAA0556

GO

GO:0005856   GO:0005737   GO:0042995   GO:0005615  

PANTHER

PTHR21534  

Subcellular location

Cytoplasm   When overexpressed, localizes to the cytoplasm where it associates with acetylated alpha-tubulin.   With evidence from 1 publications.
Cytoskeleton   When overexpressed, localizes to the cytoplasm where it associates with acetylated alpha-tubulin.   With evidence from 1 publications.
Cilium axoneme   When overexpressed, localizes to the cytoplasm where it associates with acetylated alpha-tubulin.   With evidence from 1 publications.
Cilium basal body   When overexpressed, localizes to the cytoplasm where it associates with acetylated alpha-tubulin.   With evidence from 1 publications.

Length:

388

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.30972

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00240

outside

1  -  388

 

 

Pi

220.901957

Theta

160.321274

Tajima's D

1.696022

CLR

0.262816

CSRT

0.828508574571271

Interpretation

Uncertain