Gene

KWMTBOMO01445  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008928

Annotation

PREDICTED:_UPF0047_protein_YjbQ_[Papilio_polytes]

Location

Bomo_Chr3(+):10850960-10855349      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.581 Mitochondrial   Reliability : 1.116

CDS

ATGGCCTCGAACCGAGGAATTCAGATTGGATCCGCGTGGTTTCAAAGGAAGCTGAATTTGAGGCCACAGCACCGGGGCGTGCACCTCGTCACAGAGGAGATCCTGAAACAGGTGCCGGAACTGTCGCAATTCGCGGTCGGCCTCTGTCATATACAGATAATGCACACTTCGGCGAGTCTTGCTCTAAATGAGAGTTGGGATCCTAATGTGAGGGATGACATGGAAATGATGCTCAACAAGATAGTGCCAGAGGGTCTACCTTACCGCCACTCTTGCGAGGGACCTGATGATATGCCAGCCCATGTGAAAGCATGTTTTCTGGGCTCTTCACTCACAATCCCCATCACTGATGGAAAACTTAATTTGGGTACATGGCAAGGCGTTTGGCTGTGTGAACACAGAAATCATGCTGGCAGTCGAAAGATTGTAGTGACACTGTCGGGCTGCCTGCGGGACTCGCCGCTGTCGCCCGTGTCAGCAGCGTCGTGCTCAAGTTAG

Protein

MASNRGIQIGSAWFQRKLNLRPQHRGVHLVTEEILKQVPELSQFAVGLCHIQIMHTSASLALNESWDPNVRDDMEMMLNKIVPEGLPYRHSCEGPDDMPAHVKACFLGSSLTIPITDGKLNLGTWQGVWLCEHRNHAGSRKIVVTLSGCLRDSPLSPVSAASCSS

Uniprot

H9JHD1   A0A194RMJ7   A0A194Q2R0   A0A212F6S3   A0A0K8T420   A0A0A9W5H7   + More
A0A1L8DAX6   A0A2J7QZS0   A0A1L8DAB6   A0A2M4BVT5   A0A2M3ZAX4   A0A224XYE1   A0A023F5R4   T1I3F8   A0A069DPN6   A0A2M4AUW6   A0A2M4CX87   A0A2M4CW44   T1DQG3   A0A1S4H318   A0A182HQW6   A0A336KM32   A0A1B6E116   A0A1Q3G0F0   A0A0C9PW81   A0A1Q3G0D6   Q17JX7   A0A2A4JTW4   A0A1B0GGR2   A0A1B6LIC2   A0A1B6LC18   A0A1B6K1N6   A0A1J1HFD8   A0A084WG93   A0A2W1BTR1   A0A1B6GSG1   E0VZB3   A0A2H1WT53   A0A0T6B4U3   U5EZ62   D6WV43   V5GZD4   A0A1W4WJ68   A0A1Y1LJW6   A0A182LYR7   A0A026WHY5   T1PNX6   A0A151IVV3   E9J5W2   F4WR12   A0A0J7NR50   E2APY6   A0A151WID9   A0A2H8TZ13   A0A2S2Q4W5   C4WVK9   A0A195FWD8   A0A2S2P375   A0A034WEJ0   A0A3B0K9U4   B7YZX9   M9PD98   A0A1I8QEA4   A0A158NYB5   A0A2P2I6W2   A0A0Q9X1N3   A0A0P4WMP1   A0A2A3E1Q8   V9ILF6   A0A0N0U323   A0A088AHY7   J3JYQ0   Q9VIM1   B4GSV4   B3MMU1   B4PBK8   B3NM14   Q29KS7   A0A1W4UNZ4   A0A0L7QZB9   B4LSY7   A0A226E472   B4KEQ1   E9GL84   A0A0P5FG73   A0A0P6AQM8   A0A151HZ68   A0A0P6HNQ2   A0A1D2NM82   T1JPK3   A0A154PC38   A0A067QX34   A0A0M4EET1   A0A1B6CAG7   B4JCD4   A0A310SKX8   A0A131XCF4   A0A131Y693   B7P3N2   L7ME00  

Pubmed

19121390    26354079    22118469    25401762    25474469    26334808    + More
12364791    17510324    24438588    28756777    20566863    18362917    19820115    28004739    24508170    30249741    25315136    21282665    21719571    20798317    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21347285    17994087    22516182    23537049    17550304    15632085    21292972    27289101    24845553    28049606    25576852   

EMBL

BABH01012478    KQ459989    KPJ18649.1    KQ459562    KPI99847.1    AGBW02009978    + More
OWR49424.1    GBRD01005685    JAG60136.1    GBHO01039912    JAG03692.1    GFDF01010468    JAV03616.1    NEVH01009067    PNF34065.1    GFDF01010685    JAV03399.1    GGFJ01008046    MBW57187.1    GGFM01004933    MBW25684.1    GFTR01002834    JAW13592.1    GBBI01002200    JAC16512.1    ACPB03010517    GBGD01003238    JAC85651.1    GGFK01011258    MBW44579.1    GGFL01005310    MBW69488.1    GGFL01005311    MBW69489.1    GAMD01001175    JAB00416.1    AAAB01008980    APCN01001606    UFQS01000616    UFQS01001778    UFQT01000616    UFQT01001778    SSX05437.1    SSX12311.1    SSX25797.1    GEDC01015418    GEDC01014987    GEDC01005688    JAS21880.1    JAS22311.1    JAS31610.1    GFDL01001793    JAV33252.1    GBYB01005743    JAG75510.1    GFDL01001795    JAV33250.1    CH477229    EAT47023.2    NWSH01000622    PCG75216.1    AJWK01000607    AJWK01000608    AJWK01000609    GEBQ01016542    JAT23435.1    GEBQ01018766    JAT21211.1    GECU01032992    GECU01007415    GECU01002344    JAS74714.1    JAT00292.1    JAT05363.1    CVRI01000001    CRK86555.1    ATLV01023485    ATLV01023486    KE525344    KFB49237.1    KZ149902    PZC78472.1    GECZ01004408    JAS65361.1    DS235851    EEB18719.1    ODYU01010861    SOQ56228.1    LJIG01009762    KRT82432.1    GANO01001368    JAB58503.1    KQ971357    EFA08319.1    GALX01001184    JAB67282.1    GEZM01055154    JAV73108.1    AXCM01001171    KK107238    QOIP01000007    EZA54709.1    RLU20714.1    KA649678    AFP64307.1    KQ980882    KYN11955.1    GL768208    EFZ11790.1    GL888280    EGI63370.1    LBMM01002355    KMQ94935.1    GL441643    EFN64503.1    KQ983089    KYQ47607.1    GFXV01007701    MBW19506.1    GGMS01003427    MBY72630.1    ABLF02037401    AK341568    BAH71929.1    KQ981261    KYN44149.1    GGMR01011256    MBY23875.1    GAKP01006255    GAKP01006254    JAC52697.1    OUUW01000006    SPP81801.1    AE014134    ACL83049.1    AFH03779.1    AGB93160.1    AGB93159.1    ADTU01003635    IACF01004173    LAB69767.1    CH963913    KRF98661.1    GDRN01008090    JAI67931.1    KZ288478    PBC25262.1    JR051477    AEY61507.1    KQ435955    KOX68051.1    APGK01058767    BT128380    KB741291    KB631759    AEE63338.1    ENN70614.1    ERL85846.1    AAF53896.5    CH479189    EDW25463.1    CH902620    EDV30966.2    CM000158    EDW90522.2    CH954179    EDV54550.2    CH379061    EAL33097.3    KQ414681    KOC63965.1    CH940649    EDW64898.2    LNIX01000007    OXA51777.1    CH933807    EDW12951.2    GL732550    EFX79810.1    GDIP01245885    GDIQ01264405    GDIQ01255800    LRGB01002190    JAI77516.1    JAJ95924.1    KZS08721.1    GDIP01025821    JAM77894.1    KQ976709    KYM77051.1    GDIQ01024424    JAN70313.1    LJIJ01000011    ODN06046.1    JH432007    KQ434870    KZC09466.1    KK852865    KDR14755.1    CP012523    ALC38755.1    GEDC01027023    JAS10275.1    CH916368    EDW04167.1    KQ761402    OAD57556.1    GEFH01005205    JAP63376.1    GEFM01001774    JAP74022.1    ABJB010216516    ABJB010564369    ABJB010703221    DS629642    EEC01204.1    GACK01002583    JAA62451.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000235965    UP000015103    + More
UP000075840    UP000008820    UP000218220    UP000092461    UP000183832    UP000030765    UP000009046    UP000007266    UP000192223    UP000075883    UP000053097    UP000279307    UP000095301    UP000078492    UP000007755    UP000036403    UP000000311    UP000075809    UP000007819    UP000078541    UP000268350    UP000000803    UP000095300    UP000005205    UP000007798    UP000242457    UP000053105    UP000005203    UP000019118    UP000030742    UP000008744    UP000007801    UP000002282    UP000008711    UP000001819    UP000192221    UP000053825    UP000008792    UP000198287    UP000009192    UP000000305    UP000076858    UP000078540    UP000094527    UP000076502    UP000027135    UP000092553    UP000001070    UP000001555   

PRIDE

H9JHD1    B7YZX9    Q9VIM1   

Pfam

PF01894   UPF0047        + More
PF01239   PPTA

Interpro

IPR001602   UPF0047        + More
IPR035917   YjbQ-like_sf       
IPR002088   Prenyl_trans_a       
IPR032955   RabGGTase_alpha       

SUPFAM

SSF111038   SSF111038       

Gene 3D

2.60.120.460    

ProteinModelPortal

H9JHD1   A0A194RMJ7   A0A194Q2R0   A0A212F6S3   A0A0K8T420   A0A0A9W5H7   + More
A0A1L8DAX6   A0A2J7QZS0   A0A1L8DAB6   A0A2M4BVT5   A0A2M3ZAX4   A0A224XYE1   A0A023F5R4   T1I3F8   A0A069DPN6   A0A2M4AUW6   A0A2M4CX87   A0A2M4CW44   T1DQG3   A0A1S4H318   A0A182HQW6   A0A336KM32   A0A1B6E116   A0A1Q3G0F0   A0A0C9PW81   A0A1Q3G0D6   Q17JX7   A0A2A4JTW4   A0A1B0GGR2   A0A1B6LIC2   A0A1B6LC18   A0A1B6K1N6   A0A1J1HFD8   A0A084WG93   A0A2W1BTR1   A0A1B6GSG1   E0VZB3   A0A2H1WT53   A0A0T6B4U3   U5EZ62   D6WV43   V5GZD4   A0A1W4WJ68   A0A1Y1LJW6   A0A182LYR7   A0A026WHY5   T1PNX6   A0A151IVV3   E9J5W2   F4WR12   A0A0J7NR50   E2APY6   A0A151WID9   A0A2H8TZ13   A0A2S2Q4W5   C4WVK9   A0A195FWD8   A0A2S2P375   A0A034WEJ0   A0A3B0K9U4   B7YZX9   M9PD98   A0A1I8QEA4   A0A158NYB5   A0A2P2I6W2   A0A0Q9X1N3   A0A0P4WMP1   A0A2A3E1Q8   V9ILF6   A0A0N0U323   A0A088AHY7   J3JYQ0   Q9VIM1   B4GSV4   B3MMU1   B4PBK8   B3NM14   Q29KS7   A0A1W4UNZ4   A0A0L7QZB9   B4LSY7   A0A226E472   B4KEQ1   E9GL84   A0A0P5FG73   A0A0P6AQM8   A0A151HZ68   A0A0P6HNQ2   A0A1D2NM82   T1JPK3   A0A154PC38   A0A067QX34   A0A0M4EET1   A0A1B6CAG7   B4JCD4   A0A310SKX8   A0A131XCF4   A0A131Y693   B7P3N2   L7ME00  

PDB

1VMF     E-value=2.02921e-13,     Score=178

KEGG

101738183    no KO assigned | (RefSeq) UPF0047 protein C4A8.02c

GO

GO:0016021   GO:0005968   GO:0018344   GO:0008318  

PANTHER

PTHR30615   PTHR11129:SF2  

Length:

165

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00699999999999999

Exp number, first 60 AAs:

0.00354

Total prob of N-in:

0.15457

outside

1  -  165

 

 

Pi

285.952434

Theta

165.617911

Tajima's D

2.030652

CLR

0.053072

CSRT

0.886555672216389

Interpretation

Uncertain