Gene

KWMTBOMO01427  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008956

Annotation

PREDICTED:_protein_msta?_isoform_A-like_[Bombyx_mori]

Location

Bomo_Chr3(-):10630192-10635119      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.501 Extracellular   Reliability : 2.067

CDS

ATGACCAACAAATATGAAGTTCGGCATTCAGAGCAACTGGGCAGATACTTAATAGCTGCTAAAGCTTTGAAAGCCGGAGAGACGATCCTCTCGGACGCACCGTTTGTGGTCGGACCCAACGCAGACACATCTCTGGTATGTTTCGATTGCTACTGTCCACTCATCAGCAAGTTTAATGTATGCAAGAACTGTGCCCTTGTGCCTATTTGTCCCGGAGACGGATGTCCTGAAGCTTTTTCAAAAAAATGGCACAACAGTTTCGAATGTGAACAGCTTAAGCGATTAAAATTGACGGCCGGCCTCAATCCTATGACAATGGTGCGAAACGTTGGATCGTTATTAGTTTTGAGGACGATTCTAAAGAGAAATGTCGAGCACGAAGCTTGGAATGAATTCATGCAGCTTGAAACGCATCTAGAAGCGAGACGAGGTACAGACTTGTGGGACTTTTACGAAAATACTGTGAAGTTCATCCAATCCCTCGGCCTTCTAGAATGTGAAAATGATAAAAATTTAGTTCAAAAAATATGCGCAGCGATAGACGTGAACAGTTTTGAAGTGCGAGGGCCGTCGGTTCCTGGAATTGGCTGTGGCGAGACGTTACGAGGCGTGTACCTGCAGGCGGCTTTGCTTGCTCACGATTGTGTGGGTAACACGCACATGAGCATCGGTTTGTAA

Protein

MTNKYEVRHSEQLGRYLIAAKALKAGETILSDAPFVVGPNADTSLVCFDCYCPLISKFNVCKNCALVPICPGDGCPEAFSKKWHNSFECEQLKRLKLTAGLNPMTMVRNVGSLLVLRTILKRNVEHEAWNEFMQLETHLEARRGTDLWDFYENTVKFIQSLGLLECENDKNLVQKICAAIDVNSFEVRGPSVPGIGCGETLRGVYLQAALLAHDCVGNTHMSIGL

Uniprot

H9JHF9   A0A2W1C0G5   A0A2H1WIG3   A0A194Q4C9   A0A212ELP9   A0A194RMV7   + More
A0A067R4Z4   A0A067RDW3   A0A2J7QGQ2   A0A2P8XI11   A0A1B6C1U0   E0VVZ8   A0A1B6KGR0   A0A3Q0JIA3   A0A2A3EDX7   A0A088AD79   A0A0C9R3R4   E2BYA0   D6WV30   A0A1W4WE07   A0A0N0BFD1   A0A1W4WQ87   Q16UZ3   A0A310SIZ5   A0A195F1U6   A0A1A9X3N9   A0A158P017   A0A195E044   K7IRV5   A0A182HAD7   A0A151XJ61   H9JH41   W5JFZ9   A0A182F437   F4X3N5   A0A1W7R8A5   A0A067R714   E9IT25   Q16UZ4   B0XDU5   A0A1B6F291   A0A195CQW5   A0A026WRK9   B0WLX0   A0A1B0FDN0   A0A1A9YGZ1   A0A1A9YQE5   A0A1B0AY24   A0A182R8Y9   A0A1B6HM36   A0A1B6IZB1   A0A1B0A1B4   B0X3G7   A0A182SMN4   A0A1B0ABU6   A0A0M4EFF7   A0A1W4XBQ1   A0A1A9VWM4   J3JTJ9   A0A084WCA2   A0A182QIA8   U4UGQ5   A0A182W898   A0A1A9UZ37   A0A182ND80   D6WV24   B0W1Q6   A0A0K8WGI1   A0A1B0GDK4   B4KTS2   A0A0K8VM45   A0A0K8U981   A0A0K8UBP6   B4JVZ9   A0A1I8PS11   A0A1B6FQF2   A0A212F6K8   A0A0P6GTM2   W8B4H3   D6WUY1   A0A034VCP2   A0A2P2HXR4   A0A146LWG5   A0A1B6KR19   B4N5T7   A0A2H1W6H7   A0A026WNZ2   A0A1S4H3T6   A0A0L7RA06   E9G421   A0A034W3J8   E9GBQ0   A0A2A4JU49   A0A194Q325   A0A034V8C4   A0A3L8DVG6   A0A182YE54   A0A146KZA7   A0A0P5Y4J5  

Pubmed

19121390    28756777    26354079    22118469    24845553    29403074    + More
20566863    20798317    18362917    19820115    17510324    21347285    20075255    26483478    20920257    23761445    21719571    21282665    24508170    30249741    22516182    23537049    24438588    17994087    24495485    25348373    26823975    12364791    21292972    25244985   

EMBL

BABH01012496    BABH01012497    BABH01012498    BABH01012499    BABH01012500    BABH01012501    + More
KZ149902    PZC78456.1    ODYU01008542    SOQ52234.1    KQ459562    KPI99864.1    AGBW02014011    OWR42398.1    KQ459989    KPJ18665.1    KK852699    KDR18207.1    KDR18205.1    NEVH01014361    PNF27765.1    PYGN01002060    PSN31639.1    GEDC01030059    JAS07239.1    DS235816    EEB17554.1    GEBQ01029344    JAT10633.1    KZ288285    PBC29492.1    GBYB01007437    JAG77204.1    GL451420    EFN79379.1    KQ971357    EFA08326.1    KQ435811    KOX72914.1    CH477609    EAT38342.1    KQ764772    OAD54392.1    KQ981856    KYN34545.1    ADTU01005245    KQ979955    KYN18515.1    JXUM01031061    KQ560907    KXJ80394.1    KQ982074    KYQ60456.1    BABH01041036    BABH01041037    ADMH02001505    ETN62268.1    GL888624    EGI58832.1    GEHC01000302    JAV47343.1    KDR18208.1    GL765434    EFZ16366.1    EAT38341.1    DS232783    EDS45652.1    GECZ01025429    JAS44340.1    KQ977394    KYN03035.1    KK107139    QOIP01000003    EZA57734.1    RLU24402.1    DS231992    EDS30768.1    CCAG010009911    JXJN01005505    GECU01031995    JAS75711.1    GECU01015467    JAS92239.1    DS232315    EDS39859.1    CP012524    ALC40935.1    APGK01039949    BT126556    KB740975    AEE61520.1    ENN76494.1    ATLV01022617    KE525334    KFB47846.1    AXCN02002290    KB632186    ERL89781.1    EFA08528.1    DS231823    EDS26607.1    GDHF01002334    JAI49980.1    CCAG010011926    CH933808    EDW10648.1    GDHF01012357    JAI39957.1    GDHF01029166    JAI23148.1    GDHF01028217    GDHF01024193    JAI24097.1    JAI28121.1    CH916375    EDV98137.1    GECZ01017332    JAS52437.1    AGBW02009998    OWR49371.1    GDIQ01029719    JAN65018.1    GAMC01010525    JAB96030.1    EFA08507.1    GAKP01019397    JAC39555.1    IACF01000800    LAB66552.1    GDHC01006621    JAQ12008.1    GEBQ01026075    GEBQ01023062    JAT13902.1    JAT16915.1    CH964154    EDW79726.1    ODYU01006654    SOQ48689.1    EZA57735.1    AAAB01008849    KQ414620    KOC67669.1    GL732531    EFX85869.1    GAKP01010060    JAC48892.1    GL732538    EFX83120.1    NWSH01000622    PCG75218.1    KPI99743.1    GAKP01019396    JAC39556.1    RLU24401.1    GDHC01017131    GDHC01010175    JAQ01498.1    JAQ08454.1    GDIP01063091    JAM40624.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000027135    UP000235965    + More
UP000245037    UP000009046    UP000079169    UP000242457    UP000005203    UP000008237    UP000007266    UP000192223    UP000053105    UP000008820    UP000078541    UP000091820    UP000005205    UP000078492    UP000002358    UP000069940    UP000249989    UP000075809    UP000000673    UP000069272    UP000007755    UP000002320    UP000078542    UP000053097    UP000279307    UP000092444    UP000092443    UP000092460    UP000075900    UP000092445    UP000075901    UP000092553    UP000078200    UP000019118    UP000030765    UP000075886    UP000030742    UP000075920    UP000075884    UP000009192    UP000001070    UP000095300    UP000007798    UP000053825    UP000000305    UP000218220    UP000076408   

PRIDE

H9JHF9    H9JH41   

Pfam

PF03638   TCR        + More
PF01145   Band_7
PF00856   SET
PF01753   zf-MYND

Interpro

IPR033467   Tesmin/TSO1-like_CXC        + More
IPR001107   Band_7       
IPR033294   Erlin1/2       
IPR005172   CRC       
IPR001214   SET_dom       
IPR002893   Znf_MYND       
IPR011990   TPR-like_helical_dom_sf       
IPR017896   4Fe4S_Fe-S-bd       

Gene 3D

1.25.40.10    

CDD

cd03406  SPFH_like_u3

ProteinModelPortal

H9JHF9   A0A2W1C0G5   A0A2H1WIG3   A0A194Q4C9   A0A212ELP9   A0A194RMV7   + More
A0A067R4Z4   A0A067RDW3   A0A2J7QGQ2   A0A2P8XI11   A0A1B6C1U0   E0VVZ8   A0A1B6KGR0   A0A3Q0JIA3   A0A2A3EDX7   A0A088AD79   A0A0C9R3R4   E2BYA0   D6WV30   A0A1W4WE07   A0A0N0BFD1   A0A1W4WQ87   Q16UZ3   A0A310SIZ5   A0A195F1U6   A0A1A9X3N9   A0A158P017   A0A195E044   K7IRV5   A0A182HAD7   A0A151XJ61   H9JH41   W5JFZ9   A0A182F437   F4X3N5   A0A1W7R8A5   A0A067R714   E9IT25   Q16UZ4   B0XDU5   A0A1B6F291   A0A195CQW5   A0A026WRK9   B0WLX0   A0A1B0FDN0   A0A1A9YGZ1   A0A1A9YQE5   A0A1B0AY24   A0A182R8Y9   A0A1B6HM36   A0A1B6IZB1   A0A1B0A1B4   B0X3G7   A0A182SMN4   A0A1B0ABU6   A0A0M4EFF7   A0A1W4XBQ1   A0A1A9VWM4   J3JTJ9   A0A084WCA2   A0A182QIA8   U4UGQ5   A0A182W898   A0A1A9UZ37   A0A182ND80   D6WV24   B0W1Q6   A0A0K8WGI1   A0A1B0GDK4   B4KTS2   A0A0K8VM45   A0A0K8U981   A0A0K8UBP6   B4JVZ9   A0A1I8PS11   A0A1B6FQF2   A0A212F6K8   A0A0P6GTM2   W8B4H3   D6WUY1   A0A034VCP2   A0A2P2HXR4   A0A146LWG5   A0A1B6KR19   B4N5T7   A0A2H1W6H7   A0A026WNZ2   A0A1S4H3T6   A0A0L7RA06   E9G421   A0A034W3J8   E9GBQ0   A0A2A4JU49   A0A194Q325   A0A034V8C4   A0A3L8DVG6   A0A182YE54   A0A146KZA7   A0A0P5Y4J5  

KEGG

101745584    no KO assigned | (RefSeq) protein msta, isoform A-like

GO

GO:0031625   GO:0005783   GO:0030433   GO:0046872   GO:0008168  

PANTHER

PTHR15351  

Length:

225

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04658

Exp number, first 60 AAs:

0.01675

Total prob of N-in:

0.27708

outside

1  -  225

 

 

Pi

220.532068

Theta

49.315178

Tajima's D

0.877865

CLR

0.054092

CSRT

0.626368681565922

Interpretation

Uncertain