Gene

KWMTBOMO01426  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008956

Annotation

PREDICTED:_protein_msta?_isoform_A-like_[Bombyx_mori]

Location

Bomo_Chr3(-):10626838-10629269      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.722

CDS

ATGTTACCAGTGCTGGAAAAACTTTGTCCTGGTATATCAAGGATCAAAGCAATACCTTTGTATGAGATGCATGCCGCAATAGTGCAGTTAGCAACGAGAATGTTTCATAGCCGTGAGATTAATGGATCTGAATACTTGGAGGAATTATTGAAGGCTGAATTGTATTTGAAAAAGTCATTGGAAATGTTAATTATTGAACCGGTAAAATCACCTGAAGGCAAACTATGCGCTAAAGCTTTAGAAGATTATAGGACATTAAAAGCTGCTAAGACAAAAGTTCTAGGCGCCTTACATGTCGAAGGAAAATCTTATGATACTATGTCTGAAAAAGATGTATCTGCACTAAATAGAACATAA

Protein

MLPVLEKLCPGISRIKAIPLYEMHAAIVQLATRMFHSREINGSEYLEELLKAELYLKKSLEMLIIEPVKSPEGKLCAKALEDYRTLKAAKTKVLGALHVEGKSYDTMSEKDVSALNRT

Uniprot

A0A2A4IWK7   A0A2W1C0G5   A0A2H1WIG3   A0A212ELP9   A0A194RMV7   A0A194Q4C9   + More
F4X3N5   A0A158P017   A0A026WRK9   E2BYA0   A0A0L7RA06   D6WV30   D6WV26   E2ARX8   A0A088AD79   E9IT25   A0A2A3EDX7   A0A2P8XI11   Q16UZ4   A0A0J7K281   A0A0C9RWL9   A0A0C9R3R4   A0A232F1M4   A0A154P046   A0A182HAD7   N6TQM5   U4TWE0   A0A0P5FFD9   A0A067RDW3   A0A067R4Z4   A0A0P5CXX3   A0A0P5DG05   A0A0P5ANI1   A0A0P5C0M1   A0A0P6GKR7   A0A0P5DFU7   A0A0P5SN08   A0A0P5Y1W4   A0A0P5VKE6   A0A0P6CHF9   A0A1B6HGY6   B0WLX0   B0XDU5   A0A182QIA8   A0A0P6CVS7   W5JFZ9   A0A182F437   A0A0P5J0D5   A0A0P5DZE6   A0A0P5ZU37   A0A0P5YKM6   A0A0P5EHJ5   A0A310SIZ5   A0A182SMN4   A0A195BN68   A0A195CQW5   A0A182ND80   A0A182PVE2   A0A1S4H3T6   A0A182XA73   B0XDU6   A0A1W4WE07   A0A336MY97   B4N5T7   A0A1W4WQ87   A0A182MFL5   A0A0M4EFF7   A0A1B6GKT0   A0A1W4WP02   A0A182W898   Q16UZ3   A0A1B6KGR0   A0A182JPL0   B4KTS2   A0A1W4VBD5   B0X3G7   A0A084WCA2   A0A182R8Y9   A0A182YE54   B3MD70   A1ZAP0   B4QIJ6   B4JVZ9   A0A2J7QGQ2   A0A1L8DX66   A0A1W7R8A5   Q5TUF3   A0A182HX35   E0VVZ8   A0A1A9YC52   B4GHL7   Q28ZL2   A0A1A9UTV3   A0A3B0JHC7   A0A1A9ZHT3  

Pubmed

28756777    22118469    26354079    21719571    21347285    24508170    + More
30249741    20798317    18362917    19820115    21282665    29403074    17510324    28648823    26483478    23537049    24845553    20920257    23761445    12364791    17994087    24438588    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    20566863    15632085   

EMBL

NWSH01006324    PCG63510.1    KZ149902    PZC78456.1    ODYU01008542    SOQ52234.1    + More
AGBW02014011    OWR42398.1    KQ459989    KPJ18665.1    KQ459562    KPI99864.1    GL888624    EGI58832.1    ADTU01005245    KK107139    QOIP01000003    EZA57734.1    RLU24402.1    GL451420    EFN79379.1    KQ414620    KOC67669.1    KQ971357    EFA08326.1    EFA08328.1    GL442192    EFN63827.1    GL765434    EFZ16366.1    KZ288285    PBC29492.1    PYGN01002060    PSN31639.1    CH477609    EAT38341.1    LBMM01016114    KMQ84548.1    GBYB01013430    JAG83197.1    GBYB01007437    JAG77204.1    NNAY01001307    OXU24410.1    KQ434787    KZC05296.1    JXUM01031061    KQ560907    KXJ80394.1    APGK01058750    KB741291    ENN70591.1    KB631759    ERL85869.1    GDIQ01255269    JAJ96455.1    KK852699    KDR18205.1    KDR18207.1    GDIP01163887    JAJ59515.1    GDIP01160342    JAJ63060.1    GDIP01196336    JAJ27066.1    GDIP01177295    LRGB01000479    JAJ46107.1    KZS18976.1    GDIQ01033217    JAN61520.1    GDIP01158086    JAJ65316.1    GDIQ01101932    JAL49794.1    GDIP01077339    JAM26376.1    GDIP01100280    JAM03435.1    GDIP01008593    JAM95122.1    GECU01033729    JAS73977.1    DS231992    EDS30768.1    DS232783    EDS45652.1    AXCN02002290    GDIQ01086656    JAN08081.1    ADMH02001505    ETN62268.1    GDIQ01206858    JAK44867.1    GDIP01154890    JAJ68512.1    GDIP01039410    JAM64305.1    GDIP01056597    JAM47118.1    GDIP01143226    JAJ80176.1    KQ764772    OAD54392.1    KQ976440    KYM86607.1    KQ977394    KYN03035.1    AAAB01008849    EDS45653.1    UFQT01002816    SSX34099.1    CH964154    EDW79726.1    AXCM01000199    CP012524    ALC40935.1    GECZ01006722    GECZ01001669    JAS63047.1    JAS68100.1    EAT38342.1    GEBQ01029344    JAT10633.1    CH933808    EDW10648.1    DS232315    EDS39859.1    ATLV01022617    KE525334    KFB47846.1    CH902619    EDV37403.1    AE013599    AAF57913.1    CM000362    CM002911    EDX07443.1    KMY94452.1    CH916375    EDV98137.1    NEVH01014361    PNF27765.1    GFDF01003046    JAV11038.1    GEHC01000302    JAV47343.1    EAL41037.3    APCN01005127    DS235816    EEB17554.1    CH479183    EDW35987.1    CM000071    EAL25601.1    OUUW01000001    SPP74790.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000007755    UP000005205    + More
UP000053097    UP000279307    UP000008237    UP000053825    UP000007266    UP000000311    UP000005203    UP000242457    UP000245037    UP000008820    UP000036403    UP000215335    UP000076502    UP000069940    UP000249989    UP000019118    UP000030742    UP000027135    UP000076858    UP000002320    UP000075886    UP000000673    UP000069272    UP000075901    UP000078540    UP000078542    UP000075884    UP000075885    UP000076407    UP000192223    UP000007798    UP000075883    UP000092553    UP000075920    UP000075881    UP000009192    UP000192221    UP000030765    UP000075900    UP000076408    UP000007801    UP000000803    UP000000304    UP000001070    UP000235965    UP000007062    UP000075840    UP000009046    UP000092443    UP000008744    UP000001819    UP000078200    UP000268350    UP000092445   

PRIDE

A1ZAP0   

Pfam

PF01145   Band_7        + More
PF00856   SET
PF03638   TCR
PF01753   zf-MYND
PF00675   Peptidase_M16
PF05193   Peptidase_M16_C
PF00287   Na_K-ATPase

Interpro

IPR001214   SET_dom        + More
IPR011990   TPR-like_helical_dom_sf       
IPR001107   Band_7       
IPR005172   CRC       
IPR033467   Tesmin/TSO1-like_CXC       
IPR002893   Znf_MYND       
IPR036013   Band_7/SPFH_dom_sf       
IPR011249   Metalloenz_LuxS/M16       
IPR011765   Pept_M16_N       
IPR033294   Erlin1/2       
IPR007863   Peptidase_M16_C       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR038702   Na/K_ATPase_sub_beta_sf       
IPR000402   Na/K_ATPase_sub_beta       
IPR017896   4Fe4S_Fe-S-bd       

SUPFAM

SSF63411   SSF63411        + More
SSF117892   SSF117892       
SSF57184   SSF57184       

Gene 3D

1.25.40.10     2.60.40.1660    

CDD

cd03406  SPFH_like_u3

ProteinModelPortal

A0A2A4IWK7   A0A2W1C0G5   A0A2H1WIG3   A0A212ELP9   A0A194RMV7   A0A194Q4C9   + More
F4X3N5   A0A158P017   A0A026WRK9   E2BYA0   A0A0L7RA06   D6WV30   D6WV26   E2ARX8   A0A088AD79   E9IT25   A0A2A3EDX7   A0A2P8XI11   Q16UZ4   A0A0J7K281   A0A0C9RWL9   A0A0C9R3R4   A0A232F1M4   A0A154P046   A0A182HAD7   N6TQM5   U4TWE0   A0A0P5FFD9   A0A067RDW3   A0A067R4Z4   A0A0P5CXX3   A0A0P5DG05   A0A0P5ANI1   A0A0P5C0M1   A0A0P6GKR7   A0A0P5DFU7   A0A0P5SN08   A0A0P5Y1W4   A0A0P5VKE6   A0A0P6CHF9   A0A1B6HGY6   B0WLX0   B0XDU5   A0A182QIA8   A0A0P6CVS7   W5JFZ9   A0A182F437   A0A0P5J0D5   A0A0P5DZE6   A0A0P5ZU37   A0A0P5YKM6   A0A0P5EHJ5   A0A310SIZ5   A0A182SMN4   A0A195BN68   A0A195CQW5   A0A182ND80   A0A182PVE2   A0A1S4H3T6   A0A182XA73   B0XDU6   A0A1W4WE07   A0A336MY97   B4N5T7   A0A1W4WQ87   A0A182MFL5   A0A0M4EFF7   A0A1B6GKT0   A0A1W4WP02   A0A182W898   Q16UZ3   A0A1B6KGR0   A0A182JPL0   B4KTS2   A0A1W4VBD5   B0X3G7   A0A084WCA2   A0A182R8Y9   A0A182YE54   B3MD70   A1ZAP0   B4QIJ6   B4JVZ9   A0A2J7QGQ2   A0A1L8DX66   A0A1W7R8A5   Q5TUF3   A0A182HX35   E0VVZ8   A0A1A9YC52   B4GHL7   Q28ZL2   A0A1A9UTV3   A0A3B0JHC7   A0A1A9ZHT3  

KEGG

101745584    no KO assigned | (RefSeq) protein msta, isoform A-like

GO

GO:0031625   GO:0030433   GO:0005783   GO:0046872   GO:0003824   GO:0006814   GO:0006813   GO:0005890   GO:0010629   GO:0042826   GO:0008168  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02111

Exp number, first 60 AAs:

0.02111

Total prob of N-in:

0.03700

outside

1  -  118

 

 

Pi

242.119095

Theta

170.8781

Tajima's D

1.69264

CLR

0

CSRT

0.829808509574521

Interpretation

Uncertain