SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01418
Annotation
lipase?_partial_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.386
 

Sequence

CDS
ATGCCTGTAAGTCCGTCTGTTTGTAAACTGGCCTCATTTTTTATAGGAATAGCAGAAATATGGTACATGTCAGCCCCGGTGGGGGAGTGTGATCATTGCTGTCCACGTGATGATTCCACTGACATTCAGTACCAATTGTTCACCAGGCTGGCTGCACACATCAGACTCCCTGATAAAATTTTCGCTTTCTTGATGAGATTTGAATATGGATCGTATCTAAATTCCGGCCATTATAACTTCATAGCTGTAGATTGGTCTCGTCTCATTGTTTTCCCTTGGTATGTGACAGCAGTTCGAAACACGCGTTACATGGGAAAGCGTTTAGCTAATTTCGTTGAATATCTGGACCGGGCGGGGGTGAGAGCGTCATCGTTGCACGTCATAGGGTTCTCATTAGGAGCGGAGGCCGCGGGGTTTGCCGGCAAAGAGCTTAGAAGAAAAGGTGTTGCTTTGGGTAGAATAACAGGTTTAGACCCGGCTTATCCTGGTTACAGTCTGTCCAATAGTGACGGGCATCTTGCCAAGGGTGACGCCATTTTCGTGGACGTGATCCACACGAATCCTGGCATATTTGGCTTCCCTCAAGCAATAGGGGATGTGGATTTCTACCCTAATCCTGGCAAGTGGATCCAGCCGGGCTGTTGGGTAGACCAGCTTATTATAAATAGGGAATTTAGTGCCATTAAACGTAAATCGTGA
Protein
MPVSPSVCKLASFFIGIAEIWYMSAPVGECDHCCPRDDSTDIQYQLFTRLAAHIRLPDKIFAFLMRFEYGSYLNSGHYNFIAVDWSRLIVFPWYVTAVRNTRYMGKRLANFVEYLDRAGVRASSLHVIGFSLGAEAAGFAGKELRRKGVALGRITGLDPAYPGYSLSNSDGHLAKGDAIFVDVIHTNPGIFGFPQAIGDVDFYPNPGKWIQPGCWVDQLIINREFSAIKRKS

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
EMBL
AB983538    BAQ20443.1    NWSH01000489    PCG76056.1    KZ149902    PZC78448.1    + More
ODYU01012299    SOQ58535.1    BABH01012512    KQ459562    KPI99875.1    AGBW02013528    OWR43264.1    KQ762882    OAD55345.1    CH940648    EDW60180.1    GDHF01015142    GDHF01012905    JAI37172.1    JAI39409.1    GBXI01007275    GBXI01005070    GBXI01004777    JAD07017.1    JAD09222.1    JAD09515.1    QOIP01000004    RLU23345.1    AXCN02001739    CH933808    EDW10558.2    KQ434796    KZC05783.1    CM000071    KRT02099.1    CH902619    EDV37428.2    GAKP01006370    JAC52582.1    KRF79293.1    GAMC01004329    JAC02227.1    CH477190    EAT48716.1    APCN01001475    OUUW01000001    SPP74827.1    AXCM01016020    AAAB01008816    EAA05324.4    AJVK01007790    AJVK01007791    ATLV01024391    KE525351    KFB51326.1    JXJN01021437    JXUM01002342    JXUM01002343    JXUM01002344    JXUM01002345    JXUM01002346    KQ560137    KXJ84231.1    KK853686    KDQ97822.1    CM002911    KMY94392.1    CH916375    EDV98483.1    CH954179    KQS62407.1    ADMH02002203    ETN57833.1    JRES01000195    KNC33420.1    CH936353    KRG07906.1    CM000158    KRK00148.1    CP012524    ALC42105.1    ALC42809.1    GGMS01010649    MBY79852.1    NEVH01013559    PNF28635.1    AE013599    AAF57935.2    KQ976619    KYM79087.1    KQ980653    KYN14802.1    NNAY01001993    OXU22363.1    CCAG010023317    UFQT01000174    SSX21104.1    KQ971362    EFA07925.2    CH963849    EDW74632.1    DS235088    EEB11627.1    GGMR01014558    MBY27177.1    CH480816    EDW48212.1    CM000362    EDX07422.1    EDV55692.1    EDW91857.2    KQ977808    KYM99546.1    KK107054    EZA61513.1    GBHO01020355    JAG23249.1    GDHC01012863    JAQ05766.1    GEZM01031256    JAV84955.1    KNC33419.1   
Pfam
PF00151   Lipase
Interpro
IPR029058   AB_hydrolase        + More
IPR000734   TAG_lipase       
IPR013818   Lipase/vitellogenin       
IPR033906   Lipase_N       
IPR016272   Lipase_LIPH       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1N8S     E-value=2.6941e-21,     Score=249

Ontologies

Topology

Subcellular location
Secreted  
Length:
232
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.34704999999998
Exp number, first 60 AAs:
1.21832
Total prob of N-in:
0.08766
outside
1  -  232
 
 

Population Genetic Test Statistics

Pi
275.11123
Theta
186.314486
Tajima's D
2.120117
CLR
0.247005
CSRT
0.902804859757012
Interpretation
Uncertain
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