Gene

KWMTBOMO01413

Pre Gene Modal

BGIBMGA008915

Annotation

PREDICTED:_enhancer_of_split_mbeta_protein-like_[Amyelois_transitella]

Location

Bomo_Chr3(+):10219331-10221584      View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear   Reliability : 3.908

CDS

ATGATACTACCCGTTCGGAGTATGTCGCCGTCGCACGGCGTCTTTCATCCTCCACACGAACAGCCTGATGAAGAACCCGTATCCAGAACGTATCAGTACAGAAAAGTGATGAAACCGATGCTCGAAAGGAAAAGACGAGCCCGCATCAACCGCTGCCTCGACGAATTAAAAGACCTCATGGTGACAGCTCTACAAGCAGAAGGGGAGAACGTCTCAAAGTTGGAAAAAGCTGACATCTTGGAACTCACAGTGAGGCATCTACACAATCTGAAGCAACGCGGACAGCTAGTTGTGAAACCTGAAATGTCTTACACAGAACGTTTTCGTGCCGGTTTTACTCAGTGCGCTACGGAAGTGTCTCAATTTATTGCAAATGCAACGTTGGCTGCCAATGCGATGCAGCGGCAGGGACCGGTCGATCCTCAAGCAGGAGCGAGACTCCTGCAACATTTAAGCAACTGCATAAGGAGATTGGAAAATTCACAAGTTGTGCAGCCTCAGCCAATAGCGCCGAATGGTGTTGCAAGACCGACTCCTCTGCAGCCCATAGCTCCTGCGCCTCAGACACATCAGGGTCTGATGCCCGTCCAGAGGATGCATTCTCCGGAGAGAGTCATGAAGAGACCGAACGAAGGTCCGGTGGATGCGGAAGCGCAGGTCGCGAAACGTGCGTACGCGCCGCCTTCCCCGCCGCACAGCCCCGCCTCCGAAACTGACTCCGCCCAGTCGATGTGGCGACCCTGGTGA

Protein

MILPVRSMSPSHGVFHPPHEQPDEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVRHLHNLKQRGQLVVKPEMSYTERFRAGFTQCATEVSQFIANATLAANAMQRQGPVDPQAGARLLQHLSNCIRRLENSQVVQPQPIAPNGVARPTPLQPIAPAPQTHQGLMPVQRMHSPERVMKRPNEGPVDAEAQVAKRAYAPPSPPHSPASETDSAQSMWRPW

Uniprot

H9JHB8   A0A2W1BM53   A0A2A4JVM2   A0A0L7KXU2   A0A2H1WPW1   A0A194RLG8   + More
A0A194Q4E3   A0A212EXH6   A0A154PRK8   A0A067RJ71   A0A0L7QQY7   E2B8M4   A0A1B0CKC9   A0A336K281   A0A195CUB1   A0A1Y1L3F6   A0A195DEL3   F4X5J0   A0A195FQE0   A0A195BJ90   A0A158NQ33   A0A151WYM4   A0A0P5DS54   A0A0P5SLM6   E2A5J8   E9ICM7   A0A0P6H3G6   A0A0P5ISD5   A0A0L7QQZ3   V9IGY3   A0A087ZY09   A0A310SJX5   V5H0M7   E0VQB9   A0A0K2SZQ7   A0A084VI95   A0A026WN30   A0A0N0BJR2   A0A2R7WJT8  

Pubmed

19121390    28756777    26227816    26354079    22118469    24845553    + More
20798317    28004739    21719571    21347285    21282665    20566863    24438588    24508170    30249741   

EMBL

BABH01012528    KZ149972    PZC76008.1    NWSH01000482    PCG76087.1    JTDY01004593    + More
KOB67970.1    ODYU01010171    SOQ55110.1    KQ459989    KPJ18678.1    KQ459562    KPI99879.1    AGBW02011778    OWR46157.1    KQ435088    KZC14546.1    KK852475    KDR23063.1    KQ414784    KOC61043.1    GL446361    EFN87930.1    AJWK01015997    UFQS01000020    UFQT01000020    SSW97505.1    SSX17891.1    KQ977279    KYN04271.1    GEZM01068550    JAV66900.1    KQ980934    KYN11333.1    GL888719    EGI58280.1    KQ981382    KYN42134.1    KQ976464    KYM84434.1    ADTU01022918    KQ982652    KYQ52801.1    GDIP01151413    JAJ71989.1    GDIQ01091406    GDIQ01087718    JAL60320.1    GL436993    EFN71281.1    GL762326    EFZ21665.1    GDIQ01025815    JAN68922.1    GDIQ01217514    JAK34211.1    KOC61047.1    JR047263    AEY60368.1    KQ760519    OAD60012.1    GALX01000659    JAB67807.1    DS235418    EEB15575.1    HACA01001669    CDW19030.1    ATLV01013336    KE524853    KFB37689.1    KK107148    QOIP01000009    EZA57435.1    RLU18836.1    KQ435711    KOX79511.1    KK854858    PTY19280.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000076502    UP000027135    UP000053825    UP000008237    UP000092461    UP000078542    UP000078492    UP000007755    UP000078541    UP000078540    UP000005205    UP000075809    UP000000311    UP000005203    UP000009046    UP000030765    UP000053097    UP000279307    UP000053105   

PRIDE

H9JHB8   

Pfam

PF00010   HLH        + More
PF07527   Hairy_orange

Interpro

IPR003650   Orange_dom        + More
IPR011598   bHLH_dom       
IPR036638   HLH_DNA-bd_sf       

SUPFAM

SSF47459   SSF47459       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

H9JHB8   A0A2W1BM53   A0A2A4JVM2   A0A0L7KXU2   A0A2H1WPW1   A0A194RLG8   + More
A0A194Q4E3   A0A212EXH6   A0A154PRK8   A0A067RJ71   A0A0L7QQY7   E2B8M4   A0A1B0CKC9   A0A336K281   A0A195CUB1   A0A1Y1L3F6   A0A195DEL3   F4X5J0   A0A195FQE0   A0A195BJ90   A0A158NQ33   A0A151WYM4   A0A0P5DS54   A0A0P5SLM6   E2A5J8   E9ICM7   A0A0P6H3G6   A0A0P5ISD5   A0A0L7QQZ3   V9IGY3   A0A087ZY09   A0A310SJX5   V5H0M7   E0VQB9   A0A0K2SZQ7   A0A084VI95   A0A026WN30   A0A0N0BJR2   A0A2R7WJT8  

PDB

2MH3     E-value=2.27954e-09,     Score=146

KEGG

100302605    K09090 hairy and enhancer of split, invertebrate | (RefSeq) E(spl)mgamma; enhancer of split mgamma

GO

GO:0005634   GO:0006355   GO:0046983   GO:0003677   GO:0006396   GO:0004518   GO:0003824   GO:0006334   GO:0003779   GO:0016021  

Subcellular location

Nucleus  

Length:

248

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0013

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01571

outside

1  -  248

 

 

Pi

246.22894

Theta

184.679268

Tajima's D

-1.079385

CLR

0.843962

CSRT

0.122393880305985

Interpretation

Uncertain