Silkworm Genome Informatics Database

Gene

KWMTBOMO01408

Pre Gene Modal

BGIBMGA008965

Annotation

enhancer_of_split_mbeta_[Bombyx_mori]

Location

Bomo_Chr3(-):10016477-10017246 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 4.362

CDS

ATGTCATACGAGATCGCGTATTCGGTCGCGGAAGACGGTCCGCAGCCAGTCTCGCGCACTTATCAATATCGCAAAGTGATGAAACCGATGCTTGAGCGCAAGAGGCGCGCTCGCATCAACCGCTGCCTCGACGAACTCAAGGAGCTGATGGTCAGCGCTCTACAATCTGAAGGAGAGAATGTAGCCAAATTGGAAAAAGCTGATATCTTGGAACTGACCGTTCGCCATCTTCACAAGCTGAGACGCCAGCGTCGCTTGTCACTCAACCCTACCGTGGATGTGGATCGCTTCAGAGCTGGATTTACTCACGCCGCCAACGAAGTTTCCCGCTGTCTGGCTTCAATTCCTGGTGTGGACGTGAGGTTGGGCACTCAACTAATGACCCACCTCGGGCACAGACTGAACGAAATGCAGCGAGCAGCCGCTGGCACTGAAACTCCACCAGCAAGCCCTCCCAGCCCTGCTCTCTCGACTGTTTCTTCATCGTCTGGTTACGTGAGCCCATCTCCTCCGGCGTCACCGATGCCTCTACAGACAGCAACTCCATTGGACTGCAGCATGAACACCTCACTGCCCAAAGCATCGGCTGTGTGGCGGCCCTGGTAG

Protein

MSYEIAYSVAEDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTVRHLHKLRRQRRLSLNPTVDVDRFRAGFTHAANEVSRCLASIPGVDVRLGTQLMTHLGHRLNEMQRAAAGTETPPASPPSPALSTVSSSSGYVSPSPPASPMPLQTATPLDCSMNTSLPKASAVWRPW

Uniprot

D2KP15 A0A194Q2U5 A0A194RRK7 A0A170QHP4 A0A0L7L3J0 A0A2H1WSA2 + More
A0A3G1T1Q9 I4DL72 A0A2W1BLR5 A0A2A4K0E3 A0A1Y1L3F6 A0A1W4XS24 D6WXN5 A0A212EYK8 A0A336K467 A0A1S3CZX8 A0A1S4EAV8 A0A1J1HGE7

Pubmed

19121390 26354079 26227816 22651552 28756777 28004739 + More
18362917 19820115 22118469

EMBL

BABH01012539 GU238288 LC011421 ADA69993.1 BAR88293.1 KQ459562 + More
KPI99882.1 KQ459989 KPJ18681.1 KT984954 AMY63173.1 JTDY01003166 KOB70027.1 ODYU01010621 SOQ55852.1 MG992464 AXY94902.1 AK402040 BAM18662.1 KZ149972 PZC76012.1 NWSH01000290 PCG77707.1 GEZM01068550 JAV66900.1 KQ971362 EFA08879.2 AGBW02011479 OWR46583.1 UFQS01000020 UFQT01000020 SSW97503.1 SSX17889.1 CVRI01000003 CRK87071.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000037510 UP000218220 UP000192223 + More
UP000007266 UP000007151 UP000079169 UP000183832

PRIDE

D2KP15

Pfam

PF07527 Hairy_orange + More
PF00010 HLH

Interpro

IPR003650   Orange_dom        + More
IPR011598   bHLH_dom
IPR036638   HLH_DNA-bd_sf

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

D2KP15 A0A194Q2U5 A0A194RRK7 A0A170QHP4 A0A0L7L3J0 A0A2H1WSA2 + More
A0A3G1T1Q9 I4DL72 A0A2W1BLR5 A0A2A4K0E3 A0A1Y1L3F6 A0A1W4XS24 D6WXN5 A0A212EYK8 A0A336K467 A0A1S3CZX8 A0A1S4EAV8 A0A1J1HGE7

PDB

2MH3 E-value=1.88264e-07, Score=128

KEGG

100302604 K09090 hairy and enhancer of split, invertebrate | (RefSeq) E(spl)mbeta; enhancer of split mbeta

GO

GO:0003677 GO:0006355 GO:0046983 GO:0005634 GO:0030154 GO:0000122 GO:0000977 GO:0001227 GO:0009952 GO:0050767 GO:0006396 GO:0004518 GO:0003824 GO:0006334 GO:0003779 GO:0016021

Subcellular location

Nucleus

Length:

201

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00034

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09904

outside

1 - 201

Pi

265.066338

Theta

198.463797

Tajima's D

1.037717

CLR

0.000973

CSRT

0.669466526673666

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics