Gene

KWMTBOMO01407  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008914

Annotation

DEAD_box_RNA_helicase_[Danaus_plexippus]

Location

Bomo_Chr3(+):9973097-9989436      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.912

CDS

ATGGTTAGGAGTGGGAGAGACCGTGATAGGGAAAGGGATCGACGTAGATCTCGAAGTCGTTCTGACACACCGGATCGTAAACGAAGGAGGTCAAGATCAAGAAGTCGTGATCGGGGCTCGAAATCTTCAAAGAGGAAGCGCAGTCGTAGCAGAGATCGTGACTCTAAACGAGACCGAAGCCGAGAACGGGATCGCAGTAGGGAAAGAGATCGTAGTCGTGAGCGAGATCGGGACAGAAAAAGTGATAAAAGAGATGATAAAAGAAATGGATCTAGTAAATCATCGAGAAAGAAGTCACCGGAGAAGGAAAGGGAGAGATCAAAATCAAAGGAAAAGAGTAGCAAAGCTGATTCTTCTGAATATAACCCGGGCTCTGTTGACAAGGAAGAAGAGCAAAACCGCTTGGAAGCTGAAATGCAAAAACGTCGTGAACGCATAGAGAGATGGAGGGCTGAACGTAAACGTAAAGAAATCGAATCCGCTAAAAAAGAAGTTCAAAAAGGAAGCATTGTTACTAATATACAAATACCGACATCAAAGAAATGGTCACTTGAAGATGACTCTGGTGATGAAGGTGAAGATGCGGAAGGAAAAGAAAAAAACAATATAGGAGAAAAGAAAGAAGAAGAAGATGAAATTGATCCTTTGGATGCGTACATGCAAGAAGTGCAACAAGAAGTGCGTAAAGTCAATCAAATGGACCAAGCCAAAGGAATTATTAGTGTTCCAACAACAGGTGGCACTGGCATTGTAATTCTTACTGGCACTGCCAAAAAAAAGGTCACTGAGCAGAAAAATAAGGGTGAACTGATAGAACAAAATCAAGATGGCTTGGAGTATTCGTCTGAAGAAGAAACGGAAGACATAAAAGATGCCGCTGCAAATCTTGCTTCCAAACAGAGGAAAGACTTGATCAAAGTAGACCATGCTAGTTTAGACTACATGCAATTTAGGAAGTCATTTTACACAGAAGTGAATGAACTAGCAAGAATGACACCAGAGGAAGTAGAAACGTACAGGACTGAGTTGGAAGGTATTCGTGTCAAGGGAAAAGGCTGTCCGAAACCGATCAGGACATGGGCGCATTGCGGTATCAGTAAAAAAGAACTTGACATTCTAAAGAAGTTGAATTTTGAAAAGCCCACCCCGATACAAGCACAAGCGATTCCTGCTATTATGTCTGGAAGAGATCTAATAGGAATTGCGAAGACTGGTTCAGGCAAAACATTAGCGTTCATCCTGCCAATGTTCCGGCACGTGTTGGACCAACCGGCGTTAGAAGATACAGACGGACCAATAGCCCTCATAATGACTCCTACAAGGGAACTCTGCATGCAGATCGGCAAAGATATAAAGAAGTTTGCAAAGTCACTCGGATTACGTGTGGTTTGCGTTTATGGGGGCACCGGGATATCGGAACAGATAGCTGAACTGAAGCGTGGTGCCGAAATGATAGTGTGCACCCCGGGACGCATGATCGACATGTTGGCCGCCAACTCTGGGCGCGTCACCAACCTGCGCCGCGTCACGTACGTCGTGCTCGACGAGGCCGACAGAATGTTTGACATGGGATTCGAACCACAGGTAATGAAAATCATAGACAACATAAGACCCGACAGGCAGACCGTGATGTTCAGCGCAACTTTCCCGAGACAGATGGAGGCTCTCGCTCGTCGGATATTACAGAAGCCAATCGAAATACAGGTTGGTGGAAGAAGTGTGGTCTGCAAGGATGTGGAACAGCACGTCGCTATACTAGAGGAAGAAGCTAAATTCTTCAAACTGCTGGAACTCCTCGGACTCTACAGTCAAATGGGAAGCATCATTGTCTTTGTGGACAAACAGGAGAACGCCGACAGTCTGTTAAAAGACCTCATGAAGGCCTCGTATTCTTGCATGAGCTTACACGGAGGGATTGATCAATTCGACAGGGACTCGACGATAGTCGACTTCAAGAACGGCAAGGTCAAGTTGCTGGTAGCGACCAGCGTTGCTGCCCGAGGGCTGGACGTCAAGCAACTAGTTCTGGTGGTCAACTACGACTGCCCGAATCACTATGAAGATTATGTGCATAGATGTGGACGCACCGGGCGCGCCGGCAACAAAGGGTTTGCCTGGACCTTCCTCACTCCGGAGCAGGGTCGGTACGCGGGCGACGTGCTCAGGGCCTTCGAGCTGGCCGGAGTCAGTCCTCCCGCCGAACTAAAGAACCTGTGGGAGAAGTACAAGGAGGCGCAGGAGAAGGACGGGAAGAAGGTGCACACGGGAGGCGGATTTAGTGGGAAAGGTTTCAAGTTTGACGAATCTGAAGCCCAGGCTGCTTCGGAAAAGAAAAAGTACCAGAAGGCGGCTCTCGGCCTCCAGGACTCCGACGACGAGGACGTGGAGGGAGATCTCGATCAACAAATCGAGACGATGCTCGCTGCCAAGAAGATTGTCAAGGAAATTAAACCGGGCGTGGCCGTGTCCGGTCCCGCCGCGGCTGCTGCTAGCGCGACGGACGGAAAGCTGGAGTTAGCGCGGCGGCTCGCGTCCCGCATCAACCTCGCCAAGGGACTCGGCGCAGACCAGAAGGGCGCCACGCAACAAGCCGCCGAGGCGATCCTCAAGGGCGCGCCTTCGCAGACACTCATCACGGCTAAAACAGTGGCGGAACAGCTGGCCGCGAAGTTGAACACGCGACTCAACTACCAGCCGCGAGACGACAACACAAACGAACCGACCGAGGAGGTGTTCCGCAAGTACGAGACCGAGCTGGAGATCAATGACTTCCCGCAGCAGGCCAGGTGGAGGGTCACTAGCAAGGAGGCGCTAGCTCTAATCAGCGAGTACTCAGAGGCCGGTATAACGGTCCGCGGCACGTACGTCCAGCCGGGCAAGGCGCCGCCCGAGGGCGAACGCAAGCTGTACCTCGCCATAGAGAGCTCGCAGGAGCTGGCCGTTGCCAAAGCCAAATCCGAGATAACGCGGCTCATCAAGGAAGAGCTCCTCAAACTCCAGACCTCGGCCCATCACATGGTCAACAAAGCTAGATATAAAGTTTTGTAG

Protein

MVRSGRDRDRERDRRRSRSRSDTPDRKRRRSRSRSRDRGSKSSKRKRSRSRDRDSKRDRSRERDRSRERDRSRERDRDRKSDKRDDKRNGSSKSSRKKSPEKERERSKSKEKSSKADSSEYNPGSVDKEEEQNRLEAEMQKRRERIERWRAERKRKEIESAKKEVQKGSIVTNIQIPTSKKWSLEDDSGDEGEDAEGKEKNNIGEKKEEEDEIDPLDAYMQEVQQEVRKVNQMDQAKGIISVPTTGGTGIVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFRKSFYTEVNELARMTPEEVETYRTELEGIRVKGKGCPKPIRTWAHCGISKKELDILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPALEDTDGPIALIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFPRQMEALARRILQKPIEIQVGGRSVVCKDVEQHVAILEEEAKFFKLLELLGLYSQMGSIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDVLRAFELAGVSPPAELKNLWEKYKEAQEKDGKKVHTGGGFSGKGFKFDESEAQAASEKKKYQKAALGLQDSDDEDVEGDLDQQIETMLAAKKIVKEIKPGVAVSGPAAAAASATDGKLELARRLASRINLAKGLGADQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRLNYQPRDDNTNEPTEEVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVQPGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL

Similarity

Belongs to the DEAD box helicase family.
Belongs to the phospholipase A2 family.

Uniprot

H9JHB7   A0A212EYR2   A0A2A4K0D2   A0A194Q3F3   A0A2W1BW86   Q5DNU4   + More
A0A182HAZ3   Q16HL1   A0A182M7L0   A0A182WE99   A0A182PBV5   A0A1Y9J016   A0A1S4H4L0   A0A182KUX4   A0A182I641   A0A182RLW9   A0A182TJW9   A0A182VMU2   A0A084W8G2   A0A182T244   A0A182JZR7   A0A0T6B844   A0A182YAA0   A0A1B6IZC9   B0WGF2   A0A0A9Y1E5   A0A0K8TGQ7   A0A1B6GQH8   E2BQ76   A0A1Y1K3C8   A0A182Q7L2   A0A0K8THP9   A0A1Q3FW87   A0A224X6A7   A0A0P4VNJ9   A0A182J7Z0   A0A0V0G3V5   A0A026WVB9   E1ZYN1   A0A069DXY5   A0A195BII5   A0A158P325   A0A087ZS28   A0A232EN83   A0A195DN55   A0A0L7RCY3   A0A2A3E979   A0A2J7RRL6   A0A0M9A8I0   A0A067R3N2   D6WUR2   A0A154P324   A0A1W4WIS9   A0A1B6II40   A0A0J7KKE6   A0A1J1I987   K7IV23   A0A3L8E3V1   E0VGQ6   A0A310SB24   F4W4M8   J9K0Z3   A0A195CCP7   A0A2H8TH70   A0A336MNI9   A0A195EYX9   A0A1B6EF16   A0A151WZ16   A0A336M4R3   A0A1A9WCC9   A0A1A9Z1P8   A0A1A9X8S2   A0A1B0C3B6   A0A1I8PR91   A0A1I8PR44   A0A1B0FAE6   A0A1A9VRK6   A0A0L0CAB4   W8CBI2   A0A0A1WLZ6   A0A2P8YZ64   A0A0K8UM88   A0A226EIT7   A0A0C9R3Z6   A0A0P4VYZ4   A0A087SUT4   A0A2L2XXN7   A0A151M711   A0A1B0DQ73   A0A2I4C1H8   G1N866   F6ZKV9   G3N4K0   E1BSC0   U3J0L5   A0A034VD50   T1IN03  

Pubmed

19121390    22118469    26354079    28756777    26483478    17510324    + More
12364791    20966253    24438588    25244985    25401762    26823975    20798317    28004739    27129103    24508170    26334808    21347285    28648823    24845553    18362917    19820115    20075255    30249741    20566863    21719571    26108605    24495485    25830018    29403074    26561354    22293439    20838655    20431018    15592404    23749191    25348373   

EMBL

BABH01012544    BABH01012545    AGBW02011479    OWR46584.1    NWSH01000290    PCG77721.1    + More
KQ459562    KPI99883.1    KZ149972    PZC76013.1    AY559246    AAT51707.1    JXUM01123687    JXUM01123688    KQ566744    KXJ69861.1    CH478160    EAT33750.1    AXCM01001221    AAAB01008848    APCN01003559    ATLV01021427    KE525318    KFB46506.1    LJIG01009283    KRT83390.1    GECU01015447    JAS92259.1    DS231926    EDS26949.1    GBHO01020264    GDHC01021710    JAG23340.1    JAP96918.1    GBRD01001142    JAG64679.1    GECZ01005073    JAS64696.1    GL449698    EFN82130.1    GEZM01094074    JAV55952.1    AXCN02002117    GBRD01001141    JAG64680.1    GFDL01003237    JAV31808.1    GFTR01008421    JAW08005.1    GDKW01000368    JAI56227.1    GECL01003384    JAP02740.1    KK107087    EZA59967.1    GL435237    EFN73695.1    GBGD01000307    JAC88582.1    KQ976467    KYM84105.1    ADTU01007681    NNAY01003195    OXU19824.1    KQ980713    KYN14335.1    KQ414615    KOC68650.1    KZ288340    PBC27736.1    NEVH01000599    PNF43480.1    KQ435711    KOX79400.1    KK853016    KDR12484.1    KQ971363    EFA07812.2    KQ434796    KZC05638.1    GECU01021129    JAS86577.1    LBMM01006325    KMQ90694.1    CVRI01000040    CRK94993.1    AAZX01009259    QOIP01000001    RLU27232.1    DS235150    EEB12562.1    KQ764883    OAD54275.1    GL887532    EGI70923.1    ABLF02041076    KQ977935    KYM98629.1    GFXV01001649    MBW13454.1    UFQT01001853    SSX32014.1    KQ981905    KYN33505.1    GEDC01000844    JAS36454.1    KQ982649    KYQ53026.1    UFQT01000556    SSX25262.1    JXJN01024882    CCAG010015200    CCAG010015201    JRES01001305    JRES01000781    KNC23692.1    KNC28369.1    GAMC01004771    GAMC01004770    JAC01785.1    GBXI01014450    JAC99841.1    PYGN01000274    PSN49541.1    GDHF01024633    JAI27681.1    LNIX01000004    OXA56466.1    GBYB01011024    JAG80791.1    GDRN01106404    JAI57575.1    KK112054    KFM56623.1    IAAA01007447    LAA00698.1    AKHW03006437    KYO20296.1    AJVK01018913    AJVK01018914    AAMC01051477    AAMC01051478    AADN05000072    ADON01015422    GAKP01017756    JAC41196.1    JH431114   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000069940    UP000249989    + More
UP000008820    UP000075883    UP000075920    UP000075885    UP000076407    UP000075882    UP000075840    UP000075900    UP000075902    UP000075903    UP000030765    UP000075901    UP000075881    UP000076408    UP000002320    UP000008237    UP000075886    UP000075880    UP000053097    UP000000311    UP000078540    UP000005205    UP000005203    UP000215335    UP000078492    UP000053825    UP000242457    UP000235965    UP000053105    UP000027135    UP000007266    UP000076502    UP000192223    UP000036403    UP000183832    UP000002358    UP000279307    UP000009046    UP000007755    UP000007819    UP000078542    UP000078541    UP000075809    UP000091820    UP000092445    UP000092443    UP000092460    UP000095300    UP000092444    UP000078200    UP000037069    UP000245037    UP000198287    UP000054359    UP000050525    UP000092462    UP000192220    UP000001645    UP000008143    UP000007635    UP000000539    UP000016666   

PRIDE

H9JHB7   

Pfam

PF00271   Helicase_C        + More
PF00270   DEAD
PF10233   Cg6151-P
PF01571   GCV_T
PF08669   GCV_T_C
PF06951   PLA2G12

Interpro

IPR011545   DEAD/DEAH_box_helicase_dom        + More
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR014001   Helicase_ATP-bd       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR001650   Helicase_C       
IPR027417   P-loop_NTPase       
IPR009851   Mod_r       
IPR019365   TVP18/Ca-channel_flower       
IPR013977   GCV_T_C       
IPR006222   GCV_T_N       
IPR027266   TrmE/GcvT_dom1       
IPR006223   GCS_T       
IPR029043   GcvT/YgfZ_C       
IPR033113   PLipase_A2_His_AS       
IPR036444   PLipase_A2_dom_sf       
IPR010711   PLA2G12       

SUPFAM

SSF52540   SSF52540        + More
SSF101790   SSF101790       
SSF48619   SSF48619       

Gene 3D

3.30.1360.120    

CDD

cd00079  HELICc

ProteinModelPortal

H9JHB7   A0A212EYR2   A0A2A4K0D2   A0A194Q3F3   A0A2W1BW86   Q5DNU4   + More
A0A182HAZ3   Q16HL1   A0A182M7L0   A0A182WE99   A0A182PBV5   A0A1Y9J016   A0A1S4H4L0   A0A182KUX4   A0A182I641   A0A182RLW9   A0A182TJW9   A0A182VMU2   A0A084W8G2   A0A182T244   A0A182JZR7   A0A0T6B844   A0A182YAA0   A0A1B6IZC9   B0WGF2   A0A0A9Y1E5   A0A0K8TGQ7   A0A1B6GQH8   E2BQ76   A0A1Y1K3C8   A0A182Q7L2   A0A0K8THP9   A0A1Q3FW87   A0A224X6A7   A0A0P4VNJ9   A0A182J7Z0   A0A0V0G3V5   A0A026WVB9   E1ZYN1   A0A069DXY5   A0A195BII5   A0A158P325   A0A087ZS28   A0A232EN83   A0A195DN55   A0A0L7RCY3   A0A2A3E979   A0A2J7RRL6   A0A0M9A8I0   A0A067R3N2   D6WUR2   A0A154P324   A0A1W4WIS9   A0A1B6II40   A0A0J7KKE6   A0A1J1I987   K7IV23   A0A3L8E3V1   E0VGQ6   A0A310SB24   F4W4M8   J9K0Z3   A0A195CCP7   A0A2H8TH70   A0A336MNI9   A0A195EYX9   A0A1B6EF16   A0A151WZ16   A0A336M4R3   A0A1A9WCC9   A0A1A9Z1P8   A0A1A9X8S2   A0A1B0C3B6   A0A1I8PR91   A0A1I8PR44   A0A1B0FAE6   A0A1A9VRK6   A0A0L0CAB4   W8CBI2   A0A0A1WLZ6   A0A2P8YZ64   A0A0K8UM88   A0A226EIT7   A0A0C9R3Z6   A0A0P4VYZ4   A0A087SUT4   A0A2L2XXN7   A0A151M711   A0A1B0DQ73   A0A2I4C1H8   G1N866   F6ZKV9   G3N4K0   E1BSC0   U3J0L5   A0A034VD50   T1IN03  

PDB

4LK2     E-value=1.8973e-83,     Score=792

KEGG

101742077    K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] | (RefSeq) probable ATP-dependent RNA hel

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0003676   GO:0004386   GO:0015031   GO:0016021   GO:0016042   GO:0005509   GO:0005576   GO:0050482   GO:0004623   GO:0006644   GO:0001650   GO:0016607   GO:0005634   GO:0006396   GO:0004518   GO:0003824   GO:0006334   GO:0003779  

Subcellular location

Secreted  

Length:

1015

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.01409000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10230

outside

1  -  1015

 

 

Pi

206.716084

Theta

198.618166

Tajima's D

0.036026

CLR

0.385665

CSRT

0.383130843457827

Interpretation

Uncertain