SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01401
Pre Gene Modal
BGIBMGA008968
Annotation
Uncharacterized_protein_OBRU01_10577_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.564
 

Sequence

CDS
ATGTCGGCTAATACAAATGAGAATTGGCTTCTCGTGGAGTGGAGTGACGGTGGTCGCGATGTCATTTATATCAAATCTGTGTTGGAACCGAATGTTCAAGAATTGAAGGTCGGCGTTCTGATAACGGCGAATAGGAAAGGCGAGCCGCAGAAAGGAAAGCTCATCGATCGTGCAAATGAACGCAAGTCATTGGATGCTCGTTTGAAGGAAATGGACGAGGCCGGTCCTAGTAATAAAAAGGAAGAAGAACCCCAAGACTTCTCATCAAGCTCTTCCTCGTGGGTGCCGAGTGAACGAGACATATCTACAGATTCGGAAAGGGAAGCCAGAAAAGCTAGGTTGGATAAATATTTACGGCAATATACTAACAAGCGAACCAGCAAGAAAACATTGACGCCTTCAAATAAAGTTAGTGAGGTCGTAACGAAGCCGACAAATAATAATGACCCAGTTAAAACCGGTTATGATGAAATAACTATAGCAAATTTTCTACAATCGTTGCGCGCCCAAAAAACGGAGCCGTACCTCCAAATTACCACAGCACCGAAGAGAATAAGTATGGACAGTGATACCACTCTTAACTTCCACGAATGGTTCAGGGAACTTTTTAGATCATTCGAAAGAGTTAAATGTGAAACCGCCCCGGAACATAGGTATCGTCAAGAATTTATTCCGCCACCTATTATACCGCCGACAGTAGAATTTGAACAGACCAACGAAGAAGATATAGAGAGCGAGCATAATATGAACGACGAATCAGATCGTTCTGACGACATCGTTCTAATTACCAACAAACATGACAGTGCTTTGAATGTCCTAGATAAAACTAATGAAACGAATAATGCCACCGAAGTAACGAAAAAAGAAAAAAAAGAAGATAAAACGGAATGGGCACCCATAGGTAGTGGAAAAACTTTGATACACATGGACCAGTTCAAAAAAATTAACTGGTCGTCTTACACGAAAGCGACCCGAACTTTATTGTTGGCAGTCTTTCCCAGAAGGGTTTTGGCTACTCACTCTCTTACGGGCAAACGGTCACCAGCATTCCTCAATAAGCCACCTAAACTATGTTTGGATCAGAAAATAATCGCGGATGTTATCGCGGAGATAATCGAGCGGTTTAATGTGAAAGAAAATCTAGTCAGGAGTATCATAACGACCAAGTGCGCCGATGAATGCAAAATGTGGCGAGCCAGAAAGATAAAGAAAGAATCCAAAAAGAACCAAGAAAACAGACCACCTAAAAAGAATAGCAAATTCAGAGTGAAGGTTTTGAATTAA
Protein
MSANTNENWLLVEWSDGGRDVIYIKSVLEPNVQELKVGVLITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDFSSSSSSWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESEHNMNDESDRSDDIVLITNKHDSALNVLDKTNETNNATEVTKKEKKEDKTEWAPIGSGKTLIHMDQFKKINWSSYTKATRTLLLAVFPRRVLATHSLTGKRSPAFLNKPPKLCLDQKIIADVIAEIIERFNVKENLVRSIITTKCADECKMWRARKIKKESKKNQENRPPKKNSKFRVKVLN

Summary

Pfam
PF10523   BEN
Interpro
IPR018379   BEN_domain       
PDB
4IX7     E-value=1.02689e-16,     Score=212

Ontologies

GO

Topology

Length:
427
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00161
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.01160
outside
1  -  427
 
 

Population Genetic Test Statistics

Pi
46.94015
Theta
29.471539
Tajima's D
-0.779904
CLR
120.542111
CSRT
0.178891055447228
Interpretation
Uncertain
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