Gene

KWMTBOMO01397

Pre Gene Modal

BGIBMGA008969

Annotation

PREDICTED:_centrosomal_protein_of_162_kDa_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr3(-):9868529-9871666      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.001

CDS

ATGATATTAAAAGTCAACCAATATGCTAAACATAACGTTAAAGAAAACGTTGAATCTCGGCGTAAATCAAAATCCAGGCCGTTCTCAGCCGGTGTTATTGATTCCAAGAAAGACTCCGGTAAAGTCGCGAGATTCTCAAGTAATTCACCTAAGAAAGCGAATGTTTGTAAACATGAAAACTTGTTAGAAGAACTAAAAGATACAAATGAAAGGGCCAAGAGTCTTGAACTTACAAACGTACAGCTAACAGATGATAATAAATTACTTCGAAAGAAATTGGATAAAGTCAACGAAGAGAAACATGTAGCTGATTTAAAATTGATAGAATGCGAAAAATTCATTAGTAGACTTGGTAAAGAATATGAAAACAGAAATTCTCAATTGAAAACCTTACAGGAGAATGAAGGTAAAATAATGGCTGAATTGAATAAAAAAAGAAACGACAGGAAGAATTTGACTATACAGCGTGATAAAGACGCTATTGTTATACAAGATCTTCAAAGGCAAGTTAAAGAAATGGAATTAATTTTGAAACGGAAACATCCAGATTCGGTATCAGCTCTAATAGTTGCATCGAAATCGTCAACAGTTGAAGATAATAAAAAGAAATTGCTTGAAGAACGTATATCCCGTTTAGAAATAGAGTTAAAAGATAAAGAGGATCATTTTCAGGGTATTTTAATGACACTTCAAGAAAAATTTGGAGACATGAAACAAAAGTATGAAAAACATATCATTGATGTCGAAAGACAACTCATGGATGAACGTCGAGTGAATAACGAAACAAGAAACCGATTAAATAAGACCAATCTTATTGATGTAGCCGTTCAAACGGGACCAAGAAATCAGCACACGATCGGTACGCAAACGCTACTAAAGCCTGATCGAACGTCGTCCGCAGTAAGCAGAGTATCACAAAATTCCACACTAATCTTGAATAGATTAAAAGAAGATAGTTATTTGGTGGCGACCATTAAAGGATTACAAGTCGAACTAACTGCCAAACAGCGTACTATTGGCAAAATAAATCGAGAGACGGAAGAGCTAAGAAAGAATCTGCGAACTCTGCAAAAGGAGAAAGAAGTTTTACTCAATTTGAATCCACACAAAAAAGTGAGCGGTAAACAAGGAAAGTCTACCGAGAATATATTGGCACGTATAAACACAGAAATGGAAGCTGAATTAACTGAAGTCCGGAAGGAGAACGAAGTGCTCGTACAAGAGAAAAGCAGTCTTCTAGACTCCTTAAAGCGGTCCAACGAAGACTTCATAGTTTTAAAAAAGAAAAGGATACAAGATCTTCACACGCTTCAACTCGCCCACGAGAAAGAGCTGATGCAAATGAACATGCAGATATATCCATTGCAAGAAGAGATAAAGTTATTGAATCGTACAATCGAAATACTCCAAGAACGAGTACAGAGCACCGAAGACAAAATGATTAAGTATCAAACTGCGAACAATGTTGTTGACTTGAACGGTGGCGGTGATAATTTAAGTAGGAACACGAGAGAATCCCGCTAA

Protein

MILKVNQYAKHNVKENVESRRKSKSRPFSAGVIDSKKDSGKVARFSSNSPKKANVCKHENLLEELKDTNERAKSLELTNVQLTDDNKLLRKKLDKVNEEKHVADLKLIECEKFISRLGKEYENRNSQLKTLQENEGKIMAELNKKRNDRKNLTIQRDKDAIVIQDLQRQVKEMELILKRKHPDSVSALIVASKSSTVEDNKKKLLEERISRLEIELKDKEDHFQGILMTLQEKFGDMKQKYEKHIIDVERQLMDERRVNNETRNRLNKTNLIDVAVQTGPRNQHTIGTQTLLKPDRTSSAVSRVSQNSTLILNRLKEDSYLVATIKGLQVELTAKQRTIGKINRETEELRKNLRTLQKEKEVLLNLNPHKKVSGKQGKSTENILARINTEMEAELTEVRKENEVLVQEKSSLLDSLKRSNEDFIVLKKKRIQDLHTLQLAHEKELMQMNMQIYPLQEEIKLLNRTIEILQERVQSTEDKMIKYQTANNVVDLNGGGDNLSRNTRESR

Uniprot

H9JHH2   A0A2H1VA30   A0A0L7LB87   A0A212FCG0   A0A139WE94   A0A1W4WUW5   + More
N6U742   U4U9L9   A0A1B0GHT8   A0A1Y1MB38   A0A1Y1MB80   A0A1B0D5F9   Q16P94   Q17BK3   A0A182P7K1   A0A1J1HP04   A0A084VIQ3   A0A182ISB3   A0A0L7RCD1   A0A182Y7P8   A0A182W4G0   E2BQ84   A0A195CCN4   A0A182LSS6   A0A310SIN0   A0A026WXT5   A0A182RPG2   A0A182K2H2   A0A0N0U717   A0A182UFZ7   E9IPD6   A0A182WW68   A0A182IA22   A0A1I8JT00   A0A1B0AQJ3   A0A087ZS27   A0A2A3E977   A0A0C9REV8  

Pubmed

19121390    26227816    22118469    18362917    19820115    23537049    + More
28004739    17510324    24438588    25244985    20798317    24508170    30249741    21282665   

EMBL

BABH01012556    ODYU01001461    SOQ37687.1    JTDY01001839    KOB72752.1    AGBW02009196    + More
OWR51424.1    KQ971357    KYB26175.1    APGK01039916    APGK01039917    KB740975    ENN76466.1    KB632186    ERL89752.1    AJWK01005601    AJWK01005602    AJWK01005603    AJWK01005604    AJWK01005605    GEZM01036182    JAV82914.1    GEZM01036183    JAV82913.1    AJVK01025203    CH477791    EAT36174.1    CH477320    EAT43663.1    CVRI01000014    CRK89683.1    ATLV01013379    KE524855    KFB37847.1    KQ414615    KOC68652.1    GL449698    EFN82138.1    KQ977935    KYM98619.1    AXCM01002197    KQ764883    OAD54272.1    KK107087    QOIP01000001    EZA59959.1    RLU26755.1    KQ435711    KOX79402.1    GL764503    EFZ17564.1    APCN01001088    JXJN01001903    JXJN01001904    KZ288340    PBC27739.1    GBYB01005521    JAG75288.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000007266    UP000192223    UP000019118    + More
UP000030742    UP000092461    UP000092462    UP000008820    UP000075885    UP000183832    UP000030765    UP000075880    UP000053825    UP000076408    UP000075920    UP000008237    UP000078542    UP000075883    UP000053097    UP000279307    UP000075900    UP000075881    UP000053105    UP000075902    UP000076407    UP000075840    UP000092460    UP000005203    UP000242457   

PRIDE

H9JHH2   

Pfam

PF13405   EF-hand_6

Interpro

IPR038774   CEP162-like        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR002048   EF_hand_dom       
IPR032675   LRR_dom_sf       
IPR011992   EF-hand-dom_pair       

SUPFAM

SSF47473   SSF47473       

Gene 3D

3.80.10.10    

CDD

cd00051  EFh

ProteinModelPortal

H9JHH2   A0A2H1VA30   A0A0L7LB87   A0A212FCG0   A0A139WE94   A0A1W4WUW5   + More
N6U742   U4U9L9   A0A1B0GHT8   A0A1Y1MB38   A0A1Y1MB80   A0A1B0D5F9   Q16P94   Q17BK3   A0A182P7K1   A0A1J1HP04   A0A084VIQ3   A0A182ISB3   A0A0L7RCD1   A0A182Y7P8   A0A182W4G0   E2BQ84   A0A195CCN4   A0A182LSS6   A0A310SIN0   A0A026WXT5   A0A182RPG2   A0A182K2H2   A0A0N0U717   A0A182UFZ7   E9IPD6   A0A182WW68   A0A182IA22   A0A1I8JT00   A0A1B0AQJ3   A0A087ZS27   A0A2A3E977   A0A0C9REV8  

KEGG

101746731    no KO assigned | (RefSeq) centrosomal protein of 162 kDa

GO

GO:0005509  

PANTHER

PTHR34031  

Length:

507

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00850

outside

1  -  507

 

 

Pi

188.418445

Theta

199.505426

Tajima's D

-0.257235

CLR

0.8837

CSRT

0.301084945752712

Interpretation

Uncertain