Gene

KWMTBOMO01393

Pre Gene Modal

BGIBMGA011034

Annotation

PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]

Location

Bomo_Chr3(+):9546791-9547716      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.456

CDS

ATGGAAGGTATTCAGCAGTCCATGGCACAATTGACTGATATATTCAACAAGAAATTTGCAGAATTTGAGGTAAGACAGCAGAAACTGAGCGCTCCATCCACTTCAACACTCTCCACACTGGAAGAAGAGTTTCTTGCTTTTAAAACTTTCACTCTGAATGCGCTTCGTGCACTACAGACTCAAGTGGAGCTCATTTCACTTGAAAATGATCGCCTAGAAATGCACTCAAGGAGAAAAATTCTTCTGATACACGGTGTTCCTGAACAACAGAAAGAGGACACTTTAGCTACAGTTGTCGAAACCATTGTCAGTAAATTGAAACTTAAGGACTTTAATACATCTAACATTTCCCGGTGTCACAGAATGGGTAAAACATTTACTCCAGAAAGATCTAGGCCCATTCTTTTGAAGCTATGTGACATGAACCTGCGTTCTAAGGTTTGGGCTGCTAAGACTTCGCTTAAGGGCTCAGGAATAGCACTCTCCGAGTTCTTGACCAAAAGACGTCATGATATTTTTATGTCTGCACGTCAACGCTTCGGAGTAACCAGGTGCTGGACTCGGGACGGCTGCGTTTACGTTCAGGGATCGGATGGGGTGCGACATCGTGTCGAAGTAATGTCTGATCTGGATGCTCTTGCCAAGACGACTATGCCAGAAGATGCTGCTCAAAAGAGGGGACAAACCGGCAAAGACACAAAGGAGTCTGCAGCTGCAACCAGACCAAAACGTGTGGCTGCGAACAAGAAGTAG

Protein

MEGIQQSMAQLTDIFNKKFAEFEVRQQKLSAPSTSTLSTLEEEFLAFKTFTLNALRALQTQVELISLENDRLEMHSRRKILLIHGVPEQQKEDTLATVVETIVSKLKLKDFNTSNISRCHRMGKTFTPERSRPILLKLCDMNLRSKVWAAKTSLKGSGIALSEFLTKRRHDIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEVMSDLDALAKTTMPEDAAQKRGQTGKDTKESAAATRPKRVAANKK

Uniprot

H9JND1   A0A2A4J0P1   A0A0L7KPM5   A0A2A4JPZ6   A0A0L7K1Y0   A0A0L7KMJ9   + More
A0A2A4JP60   A0A0L7K245   A0A0L7LEM3   A0A0L7KIU7   A0A0L7KW56   A0A0L7K490   A0A2W1C1G2   A0A0L7L318   A0A2H1W7N3   A0A2W1AYL0   A0A0L7L7Q1   A0A2A4JF70   A0A2A4ITX7   A0A2H1X0E0   A0A437BDH8   A0A2H1VLT4   A0A2A4JAE4   A0A2A4JRK8   A0A0L7LN09   A0A2H1W136   A0A2W1BPW3   A0A2W1BHY6   S4PY07   A0A437B2M3   A0A2W1BKL8   A0A2A4JKL5   A0A2A4JVW6   A0A0L7KXE0   A0A2A4JNA4   A0A2W1B638   A0A0L7KWV6   A0A2A4JIA9   A0A2A4ISJ1   A0A2A4JSS2   A0A2A4JVB8   A0A0L7LT08   A0A2A4J7K0   A0A2A4K0M9   A0A2H1WT06   A0A0L7KDU3   A0A0L7KL53   A0A2A4IZX0   A0A3Q0JL57   A0A3Q0IRU1  

Pubmed

19121390    26227816    28756777    23622113   

EMBL

BABH01019446    BABH01019447    BABH01019448    BABH01019449    BABH01019450    NWSH01004248    + More
PCG65306.1    JTDY01007405    KOB65227.1    NWSH01000800    PCG74117.1    JTDY01016995    KOB51870.1    JTDY01009052    KOB64154.1    NWSH01000964    PCG73374.1    JTDY01015832    KOB51930.1    JTDY01001444    KOB73845.1    JTDY01009601    KOB63242.1    JTDY01005020    KOB67468.1    JTDY01010801    JTDY01009435    KOB57999.1    KOB63512.1    KZ149916    PZC77943.1    JTDY01003374    KOB69654.1    ODYU01006869    SOQ49099.1    KZ150737    PZC70349.1    JTDY01002460    KOB71369.1    NWSH01001639    PCG70611.1    NWSH01007488    PCG62946.1    ODYU01012456    SOQ58773.1    RSAL01000083    RVE48435.1    ODYU01003266    SOQ41795.1    NWSH01002122    PCG69097.1    NWSH01000709    PCG74665.1    JTDY01000521    KOB76815.1    ODYU01005692    SOQ46801.1    KZ149998    PZC75357.1    KZ150113    PZC73314.1    GAIX01004118    JAA88442.1    RSAL01000191    RVE44670.1    KZ150083    PZC73827.1    NWSH01001172    PCG72268.1    NWSH01000512    PCG75926.1    JTDY01004617    KOB67938.1    NWSH01000981    PCG73266.1    KZ150731    PZC70355.1    JTDY01004815    JTDY01001265    KOB67717.1    KOB74342.1    NWSH01001465    PCG71162.1    PCG71163.1    NWSH01008089    PCG62701.1    NWSH01000695    PCG74738.1    NWSH01000574    PCG75564.1    JTDY01000147    KOB78598.1    NWSH01002863    PCG67420.1    NWSH01000281    PCG77797.1    ODYU01010789    SOQ56106.1    JTDY01010087    KOB61249.1    KOB61251.1    JTDY01009138    KOB64057.1    NWSH01004711    PCG64730.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000283053    UP000079169   

PRIDE

H9JND1   

Pfam

PF01582   TIR        + More
PF12931   Sec16_C
PF00027   cNMP_binding

Interpro

IPR035897   Toll_tir_struct_dom_sf        + More
IPR000157   TIR_dom       
IPR004244   Transposase_22       
IPR024298   ACE1_Sec16_Sec31       
IPR027417   P-loop_NTPase       
IPR000595   cNMP-bd_dom       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       

SUPFAM

SSF52200   SSF52200        + More
SSF52540   SSF52540       
SSF51206   SSF51206       

Gene 3D

3.40.50.10140     2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

H9JND1   A0A2A4J0P1   A0A0L7KPM5   A0A2A4JPZ6   A0A0L7K1Y0   A0A0L7KMJ9   + More
A0A2A4JP60   A0A0L7K245   A0A0L7LEM3   A0A0L7KIU7   A0A0L7KW56   A0A0L7K490   A0A2W1C1G2   A0A0L7L318   A0A2H1W7N3   A0A2W1AYL0   A0A0L7L7Q1   A0A2A4JF70   A0A2A4ITX7   A0A2H1X0E0   A0A437BDH8   A0A2H1VLT4   A0A2A4JAE4   A0A2A4JRK8   A0A0L7LN09   A0A2H1W136   A0A2W1BPW3   A0A2W1BHY6   S4PY07   A0A437B2M3   A0A2W1BKL8   A0A2A4JKL5   A0A2A4JVW6   A0A0L7KXE0   A0A2A4JNA4   A0A2W1B638   A0A0L7KWV6   A0A2A4JIA9   A0A2A4ISJ1   A0A2A4JSS2   A0A2A4JVB8   A0A0L7LT08   A0A2A4J7K0   A0A2A4K0M9   A0A2H1WT06   A0A0L7KDU3   A0A0L7KL53   A0A2A4IZX0   A0A3Q0JL57   A0A3Q0IRU1  

KEGG

105841315    no KO assigned | (RefSeq) uncharacterized LOC105841315

GO

GO:0016021   GO:0007165  

PANTHER

PTHR11505  

Length:

250

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00446

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.10116

outside

1  -  250

 

 

Pi

286.805151

Theta

195.283641

Tajima's D

1.430885

CLR

0.533037

CSRT

0.775361231938403

Interpretation

Uncertain