SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01390
Pre Gene Modal
BGIBMGA008976
Annotation
molting_carboxypeptidase_A_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.263 Nuclear   Reliability : 1.586
 

Sequence

CDS
ATGATAGGAGAGAGTGCTGGAGAGGGAGAACGCGGAGGGGTTCTCAACCTAGGAGCATCTACCGTCCTAGGGAGTGCCCTAGGTTTGGGGATGGGTTTCTTGGGTGAGGGAAGGGATTCCTTTGAGGGGGACGTTGAGCGAGAGGAGGAGGGGGAGGACGAAGCAGATGTGGATGCAGAAGAGGAAGGAGTGACGGAGGTAGCTTCGCTATCGTCACCCTCGGATCTAGAAGAGGGGCCTATCCTCGGTCTCTTGTCTTTCTCCTCAGAAGAGCCCCGGTCGGACTCGGACCTGGCCTTCTTTCGCGGCCGAGGGGTCCCCGAGTTATCGGTCGGTAAGGGAAAGCAACTTTCCCCCGAACCGATTCTCGGCGGTCCCTGGGCCGCTCCAGAAGGCCCGGGCTTATTGTACATACTTCCAGTACTGAATCCGGATGGTTATGAATACACGCACACGCACGACAGAATGTGGCGTAAGAACAGGGCCCGTTACGGTGAATGCGTCGGAGTTGACCTTAACAGGAATTTCAGTTACGGCTGGGGAGAGAAAGGCGAGGAAGGTTCATCAGAAGACCCGGGTAACATCTTTTACCGAGGACCGAAACCATTCTCCGAACCTGAAACGGCCGCTCTAAGACGCTTGATCACCAAAAGCTCGACGCCGTTCAAGGTGTTTCTATCGTTTCATAGCTACGGCGAAGTCGTTATATTCCCATGGGGGTACACAGATGAACCATGTCCTGATTATGTAGAGCTGTTGGAAGGAGGCACTTCTATTGCAAAGGCAATATATGAAACAAGCGGACGCACATATAAAGTAGGCAGTACGAAGGATCTCATGTATTTTGCGTGCGGCAACAGTATAGATTGGAGTTACGCTGTTGCGGGCATACCTTATTCGTATATGGTTGAATTGAGAGGGAAGAAACACAGATTCCTGCTGCCTCAAAACGAAATCGAGTCAACCGCCAAAGAAGTAATGAATGGAGTATTCAGATTGTTGGATTTTGTTGACGGGAAAAGTAAAAGTTGCCAGTCGTGTGACTGTTCGAAATGA
Protein
MIGESAGEGERGGVLNLGASTVLGSALGLGMGFLGEGRDSFEGDVEREEEGEDEADVDAEEEGVTEVASLSSPSDLEEGPILGLLSFSSEEPRSDSDLAFFRGRGVPELSVGKGKQLSPEPILGGPWAAPEGPGLLYILPVLNPDGYEYTHTHDRMWRKNRARYGECVGVDLNRNFSYGWGEKGEEGSSEDPGNIFYRGPKPFSEPETAALRRLITKSSTPFKVFLSFHSYGEVVIFPWGYTDEPCPDYVELLEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKKHRFLLPQNEIESTAKEVMNGVFRLLDFVDGKSKSCQSCDCSK

Summary

Pfam
PF00246   Peptidase_M14        + More
PF02244   Propep_M14
Interpro
IPR034223   IGCP-like_CPD        + More
IPR000834   Peptidase_M14       
IPR036990   M14A-like_propep       
IPR003146   M14A_act_pep       
Gene 3D
PDB
5MRV     E-value=7.35656e-37,     Score=385

Ontologies

Topology

Length:
351
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.09257
Exp number, first 60 AAs:
20.47663
Total prob of N-in:
0.90341
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  351
 
 

Population Genetic Test Statistics

Pi
334.687938
Theta
213.082298
Tajima's D
2.162994
CLR
0.1388
CSRT
0.909454527273636
Interpretation
Uncertain
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