Silkworm Genome Informatics Database

Gene

KWMTBOMO01386 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008978

Annotation

putative_neuropeptide_precursor_protein_precursor_[Bombyx_mori]

Location

Bomo_Chr3(-):9422469-9427000 View in EpiBrowser

Full name

Putative neuropeptide precursor protein

Location in the cell

Nuclear Reliability : 4.198

CDS

ATGTTATTATTTTCCCTAACCGCTATTACAGCGGTCCTTGCTGTCAGCGCAGTGCCGACGCCTTCGAACAACAAAGATGGCAGTACCATCAGTGAACTGCCAGAAAATTGGGATCAAACAAAAGATGATAACCGATCTCTCTTCTTGAACAAGAGTGACAAAAACGATTTGGAACCTTACCCGCTTGCCCTCAGCGAAGAAGATGGCTATGACCAAACGGTTGACCAACGCTTCGACTCACCACAGTCCAATGGAGAACTCGATAATCTTATCATGAGGCCTGAACTTTATGGCGAACCACCGGCAATGGAAGGACTCGCTTCTGCATTCGACTTACAACGACGTAAGAGAGGAAGCGGCACAAAAGTAGGCGGGGCCGGTGCTGCCACTAAAGTCGTTACGAAATCTGGATCGGGCAAGAAAAACCTCAAGCCAGAAGATCAAGCCGCTCTGTCACCAATCGATTTAATGACTCAACATGAAGCTCAACGCCGTAAGCGTGGCAGCGGTACTAAGGTGGGCGGAGCTGCTGCTTCTGCCAAGACCGCCACAAAAAATTCCGGTGGAAATAAGAAGAACTTTAGGCCGATTTCAGAACGACGCAAACGAGACTCGGGTTTGAGCGCCGCTGACGTGCGAGCTCTGTTGAATCTTTGGGAAGCTCAGGAACGCCGAAAGCAAGAGTATGCAAACCAATTCGCCGCCGATAGATATTATGGTCGTGTAAATCCAGATGAGGAACAACCTGAAGTTGATGAAAATGGCGATTTGTGGTACAACGAGCCCGTCGTTATCGGGCCGCATGATCGCGACTACCCGCATCACTCCTACTTCTCCGAACAAAACCGAATGGCGCTTGCTCGTGGCTATCCTGACCTATATCAAGTCGGACCGAATGAGTTGGCGCAGAGGTACGAGGAAGCCCGTCGCAAGAGGCAATACGCTAACAAGATGAAACGATTCATGGTGGCCAAAAAGCGTTCGGACAACATGATGCACCAGAACAACTACCGCCCGCGCGACGACTTGTACACCCTTGCTGAGCTACTCCGCTCTGCACCACGAGTACAGGAACAAGATATTCCAGTGTACCGGCGACTGATACTTTAA

Protein

MLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEDGYDQTVDQRFDSPQSNGELDNLIMRPELYGEPPAMEGLASAFDLQRRKRGSGTKVGGAGAATKVVTKSGSGKKNLKPEDQAALSPIDLMTQHEAQRRKRGSGTKVGGAAASAKTATKNSGGNKKNFRPISERRKRDSGLSAADVRALLNLWEAQERRKQEYANQFAADRYYGRVNPDEEQPEVDENGDLWYNEPVVIGPHDRDYPHHSYFSEQNRMALARGYPDLYQVGPNELAQRYEEARRKRQYANKMKRFMVAKKRSDNMMHQNNYRPRDDLYTLAELLRSAPRVQEQDIPVYRRLIL

Keywords

Complete proteome Cytoplasm Reference proteome Secreted Signal

Feature

chain Putative neuropeptide precursor protein

Uniprot

B9WZ56 A0A2W1B921 A0A2A4KAH0 A0A194RMZ6 A0A194Q4H2 A0A2H1V225 + More
A0A0L7LGM9 A0A212FDQ2 A0A2A4KBG0

Pubmed

19540422 28756777 26354079 26227816 22118469

EMBL

AB162718 BAH22627.1 KZ150259 PZC71758.1 NWSH01000002 PCG81079.1 + More
KQ459989 KPJ18705.1 KQ459562 KPI99909.1 ODYU01000332 SOQ34895.1 JTDY01001204 KOB74549.1 AGBW02009016 OWR51862.1 PCG81080.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000037510 UP000007151 + More

PRIDE

B9WZ56

Pfam

PF00076 RRM_1 + More
PF00160 Pro_isomerase

Interpro

IPR035538   Cyclophilin_PPIL4        + More
IPR029000   Cyclophilin-like_dom_sf
IPR002130   Cyclophilin-type_PPIase_dom
IPR000504   RRM_dom
IPR035542   CRIP
IPR035979   RBD_domain_sf
IPR012677   Nucleotide-bd_a/b_plait_sf

SUPFAM

SSF54928 SSF54928 + More
SSF50891 SSF50891

Gene 3D

2.40.100.10 3.30.70.330

CDD

cd01921 cyclophilin_RRM

ProteinModelPortal

B9WZ56 A0A2W1B921 A0A2A4KAH0 A0A194RMZ6 A0A194Q4H2 A0A2H1V225 + More
A0A0L7LGM9 A0A212FDQ2 A0A2A4KBG0

KEGG

100301494 no KO assigned | (RefSeq) K5, BmK5; putative neuropeptide precursor protein

GO

GO:0005737 GO:0005576 GO:0003755 GO:0003723 GO:0007218

PANTHER

PTHR45843

Subcellular location

Cytoplasm
Secreted

SignalP

Position: 1 - 17, Likelihood: 0.981969

Length:

369

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.48388

Exp number, first 60 AAs:

0.48388

Total prob of N-in:

0.02708

outside

1 - 369

Pi

167.559425

Theta

190.534496

Tajima's D

-0.339836

CLR

185.177033

CSRT

0.28243587820609

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics