SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01385
Pre Gene Modal
BGIBMGA008980
Annotation
PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_7-like_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.495
 

Sequence

CDS
ATGGCTTCCAATAGTTCCAATGTGCAAGACTCGCCAGTTCATCAGCAGACGTTTGTGGAGGAGATTGATTACAGTGAAATACAGGAGCTTTCGGTCGTAGGGAAAGGGGCCTTCGGTGTTGTCTGGAAGGGTGTATGGCGGAACAGATTTGTAGCGGTAAAGCACATAAATTCAGAGGCGGAGAAACGTGAATTTGCGATCGAGGTACGCCAGTTATCTCGCGTATGTCACCCAAACATTGTGCGATTGTACGGAGCGTGCACGCGGGGTGCTCACGTATGCCTCGTCATGGAGTATGCAGAAGGTGGCTCTCTCTATAATGTACTACACAACCGACCCAAACCCAAATACACAGCAGCACATGCAATGAGCTGGGCCCGCCAGTGCGCTGAGGGTGTAGCATACCTTCACTCCATGAAACCAAAACCATTAATACACAGGGATTTAAAACCACCCAATCTATTATTAGTGGGTGGAGGGCAACGCCTGAAGATTTGTGATTTTGGCACAGCAGCTGATAAGGCAACATACATGACGAATAATAAAGGCAGTGCTGCTTGGATGGCTCCTGAGGTATTTGAAGGATCAACATACACAGAAAAATGTGATGTGTTCTCATGGGGGATAATACTGTGGGAGGTATTATCTAGGAGGAAACCATTTGAAGAAGGTGGTTCTGCATATAGAATAATGTGGGCGGTGCATACAGGTCAAAGACCAAATCTAATAGAGGGATGCCCGGAGCCAATAGAGCAGCTGATGACACAATGTTGGCACAAAATACCAGCACAAAGACCAAGCATGGCCAAGGTAACGGAAATAATGTCAGCACTATGCGAGTTCTTTCCGGGTGCTGACACGCCGATAAACTACGACGACTGCGAGGTGGACGACTCAGAGTGTTCGGAGGATGAGTGTGGCTCTCGAGACAGCCTCGACACTGACACAGAACACGATATACTGTCTCAAGTACACATCCCCACTCAGTACCCCGACCATAGCACCTCCGACCCCGTACTCAGGAACATCGACACCCCGTTACAGCCGTCCAGACCGCGCAGCTACGTCGAGACGCAAGTGAGTAAGCTACAGAACATAATGGCCGCTGAGGCGCACCCCAAAACGACGGCACTATCGAAGGACGAGTCCGACGCCCATAACAGGGTCGGTGCCATTAGGATTCCTCAACACTTTAAAAAGTCTGAAGATTTTCTGGAAGCCGGAAGATCGCCGATCAGCATCAACAGGACATCGAGCTCGCCCGTGCCTTCAGAGAGGACCTACGTGCCAAGCGAGGGCAGCACACCCCAGGACTCGTTGCGAGTCATCAAAAGTCCTGTCGTCTTCAGCGAGAGTTCATCTCCGCGGAGACTCTCGCCCATCCCCAATTACAACATCGGAAACATTAATCCGCGACATATAGATACGGATCCTTATTGGAAGAGGGAGGTTGATAAACTGTCTCCGACCCGAAGTCCTTCGGTCATGAGTAACTCGAGCTTGCTCAGAAAGGAAGATTGCAACCAGAATTATTATGACAGATTGAGCGCCACCAACAGTCCAATGACACCAGTGAGAGAATACAATGGGAACGTAACGCAGAGACCGATCAATTCGAGCATACAAACGCCATTACATATAGACGTGGATCCTAACACGTGGGAAATCATCAATGCGCCTATACATTTTGATGATTATGTTGAAGTGAGGAATCATCCTGGTTTCGACAAATACTACATCGGCGGTGAGTACGATCAAAATATCCTAGCAACTAAACACAAAAAATTAAAAAAAAAATATTACCGTCTCTGA
Protein
MASNSSNVQDSPVHQQTFVEEIDYSEIQELSVVGKGAFGVVWKGVWRNRFVAVKHINSEAEKREFAIEVRQLSRVCHPNIVRLYGACTRGAHVCLVMEYAEGGSLYNVLHNRPKPKYTAAHAMSWARQCAEGVAYLHSMKPKPLIHRDLKPPNLLLVGGGQRLKICDFGTAADKATYMTNNKGSAAWMAPEVFEGSTYTEKCDVFSWGIILWEVLSRRKPFEEGGSAYRIMWAVHTGQRPNLIEGCPEPIEQLMTQCWHKIPAQRPSMAKVTEIMSALCEFFPGADTPINYDDCEVDDSECSEDECGSRDSLDTDTEHDILSQVHIPTQYPDHSTSDPVLRNIDTPLQPSRPRSYVETQVSKLQNIMAAEAHPKTTALSKDESDAHNRVGAIRIPQHFKKSEDFLEAGRSPISINRTSSSPVPSERTYVPSEGSTPQDSLRVIKSPVVFSESSSPRRLSPIPNYNIGNINPRHIDTDPYWKREVDKLSPTRSPSVMSNSSLLRKEDCNQNYYDRLSATNSPMTPVREYNGNVTQRPINSSIQTPLHIDVDPNTWEIINAPIHFDDYVEVRNHPGFDKYYIGGEYDQNILATKHKKLKKKYYRL

Summary

Pfam
PF07714   Pkinase_Tyr
Interpro
IPR017441   Protein_kinase_ATP_BS        + More
IPR017421   MAPKKK7       
IPR008271   Ser/Thr_kinase_AS       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
SUPFAM
SSF56112   SSF56112        + More
SSF48403   SSF48403       
Gene 3D
PDB
4L53     E-value=4.08208e-112,     Score=1037

Ontologies

Topology

Length:
603
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0118
Exp number, first 60 AAs:
0.00216
Total prob of N-in:
0.00444
outside
1  -  603
 
 

Population Genetic Test Statistics

Pi
207.995134
Theta
216.955731
Tajima's D
-1.124039
CLR
114.242059
CSRT
0.113644317784111
Interpretation
Uncertain
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