Gene

KWMTBOMO01381  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008903

Annotation

ribosomal_protein_L37A_[Bombyx_mori]

Location

Bomo_Chr3(+):9340581-9342235      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.11

CDS

ATGGCCAAACGTACCAAAAAGGTTGGAATTACTGGCAAATATGGCACACGTTACGGTGCCTCTCTACGTAAAATGGTCAAAAAGATGGAAGTAACCCAACACGCAAAGTATACTTGCTCATTTTGTGGTAAGGATGCTATGAAACGTTCTTGTGTCGGCATCTGGTCTTGTAAGCGATGCAAGAGGACTGTAGCAGGAGGAGCTTGGGTATTCTCCACTACTGCTGCCTCATCATGCAGATCTGCTGTCAGGAGGTTACGTGAAGTAAAGTAA

Protein

MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVRRLREVK

Uniprot

A0A0L7LI15   A0A2A4KAW8   G0ZEH6   E3UPD3   E7DZ58   D1LYM1   + More
S4PT08   A0A212FDK8   Q5UAP9   Q962S6   A0A2W1BD07   Q6F460   I4DM52   I4DIR2   A0A2P8ZJV5   A0A0P5HFW9   D1M837   Q4GX93   Q4GX89   A0A0P5VUK8   A0A2A3EAU7   A0A088A6A4   E2BM82   A0A067RA69   D6WXL6   A0A0N8B7F4   A0A0N8AQC4   A0A226EHT2   A0A1D2NL26   Q1W2A6   A0A0P5UI72   A0A1S3D583   A0A0P5UTT4   A0A0J7KWZ2   A0A158NQJ7   E1ZXG1   Q4GX91   Q4GX92   A0A0N8B9I5   Q4GX90   A0A0P5GIT9   A0A3L8E320   A0A1B6ER61   A0A164Q1K7   A0A0N7ZEI6   A0A2J7RBU2   J3JVL5   A0A0N0BC79   E9FUX6   A0A0P5EF83   B1P1V7   A0A151IP97   Q56FF8   A0A0P5UYU9   F4WKB0   A0A0N8BPM7   A0A195D3R4   T1GTV0   A0A0P5L8N5   K7J907   B4LUF1   B4KGT1   B4MU13   A0A1A9UTA9   A0A1B0BSE6   A0A1A9WK91   D3TQ13   U5EUS2   A0A182K7K6   B8RIV7   B0WLK8   T1DF29   A0A2M3ZZN0   A0A2M4C4S8   W5JIP1   Q1HR76   A0A182F1P0   A0A023EEB3   A0A0P5GDL2   A0A084W8P6   A0A1I8N6Y1   A0A1I8PWR3   A0A1L8EHP1   A0A182JBN7   B4JAT4   A0A0P4WP00   A0A0P5J0H0   A0A0K8TPP0   U5EY52   A0A0P6GA08   A0A1D1Z283   A0A3B0K2W7   Q29MW3   B4G8M7   B4P3T2   B3MPA1   B4I1D0   B3N4S6   B4NRX6   A0A1W4VDF6  

Pubmed

26227816    23622113    22118469    19121390    14668217    28756777    + More
22651552    29403074    20798317    24845553    18362917    19820115    27289101    21347285    30249741    22516182    23537049    21292972    21719571    20075255    17994087    20353571    20920257    23761445    17204158    17510324    24945155    24438588    25315136    26369729    15632085    17550304    22936249   

EMBL

JTDY01001050    KOB75009.1    NWSH01000002    PCG81048.1    JF265054    AEL28885.1    + More
HM536617    ADO95156.1    HQ424761    ADT80705.1    GU084295    ACY95328.1    GAIX01012863    JAA79697.1    AGBW02009016    OWR51855.1    BABH01012585    AY769309    AAV34851.1    AF400200    ODYU01006134    AAK92172.1    SOQ47722.1    KZ150259    PZC71765.1    AB180430    BAD26674.1    AK402370    BAM18992.1    AK401180    BAM17802.1    PYGN01000034    PSN56786.1    GDIQ01250567    JAK01158.1    GU120461    ACY71311.1    AM049130    CAJ17430.1    AM049134    CAJ17434.1    GDIQ01235770    GDIP01109613    JAK15955.1    JAL94101.1    KZ288300    PBC28893.1    GL449158    EFN83208.1    KK852639    KDR19629.1    KQ971362    EFA08866.2    GDIQ01205427    JAK46298.1    GDIQ01253267    JAJ98457.1    LNIX01000003    OXA56979.1    LJIJ01000013    ODN05947.1    DQ445521    ABD98759.1    GDIP01112516    JAL91198.1    GDIP01109612    JAL94102.1    LBMM01002437    KMQ94831.1    ADTU01023353    GL435038    EFN74138.1    AM049132    CAJ17432.1    AM049131    CAJ17431.1    GDIQ01199579    JAK52146.1    AM049133    CAJ17433.1    GDIQ01247317    JAK04408.1    QOIP01000001    RLU26922.1    GECZ01029536    JAS40233.1    LRGB01002485    KZS07346.1    GDIP01253249    JAI70152.1    NEVH01005890    PNF38307.1    APGK01035659    BT127283    KB740928    KB631696    AEE62245.1    ENN77905.1    ERL85436.1    KQ435922    KOX68611.1    GL732525    EFX88838.1    GDIQ01270495    JAJ81229.1    EU251053    ACB05775.1    KQ976878    KYN07661.1    AY961542    AAX62444.1    GDIP01109614    JAL94100.1    GL888199    EGI65334.1    GDIQ01157243    JAK94482.1    KQ976885    KYN07550.1    CAQQ02390678    GDIQ01198279    JAK53446.1    CH940649    EDW64137.1    CH933807    EDW11131.1    CH963852    EDW75602.1    JXJN01019679    CCAG010009727    EZ423515    ADD19791.1    GANO01002196    JAB57675.1    EZ000381    GFDL01010994    ACJ64255.1    JAV24051.1    DS231987    EDS30538.1    GAMD01003271    JAA98319.1    GGFK01000611    MBW33932.1    GGFJ01011181    MBW60322.1    ADMH02001134    GGFL01004253    ETN63981.1    MBW68431.1    DQ440218    CH478001    ABF18251.1    EAT34491.1    GAPW01006633    GAPW01006632    GEHC01000453    JAC06965.1    JAV47192.1    GDIQ01246268    JAK05457.1    ATLV01021497    KE525319    KFB46590.1    GFDG01000680    JAV18119.1    CH916368    EDW03892.1    GDIP01254150    JAI69251.1    GDIQ01208127    JAK43598.1    GDAI01001226    JAI16377.1    GANO01002195    JAB57676.1    GDIQ01039090    JAN55647.1    GDJX01006911    JAT61025.1    OUUW01000006    SPP82240.1    CH379060    EAL33580.2    CH479180    EDW28707.1    CM000157    EDW88383.1    CH902620    EDV32220.2    CH480820    EDW54337.1    CH954177    EDV57828.1    CH981614    CM002910    EDX15354.1    KMY88250.1   

Proteomes

UP000037510    UP000218220    UP000007151    UP000005204    UP000245037    UP000242457    + More
UP000005203    UP000008237    UP000027135    UP000007266    UP000198287    UP000094527    UP000079169    UP000036403    UP000005205    UP000000311    UP000279307    UP000076858    UP000235965    UP000019118    UP000030742    UP000053105    UP000000305    UP000078542    UP000007755    UP000015102    UP000002358    UP000008792    UP000009192    UP000007798    UP000078200    UP000092460    UP000091820    UP000092444    UP000075881    UP000002320    UP000000673    UP000008820    UP000069272    UP000030765    UP000095301    UP000095300    UP000075880    UP000001070    UP000268350    UP000001819    UP000008744    UP000002282    UP000007801    UP000001292    UP000008711    UP000000304    UP000192221   

PRIDE

Q5UAP9   

Pfam

PF01780   Ribosomal_L37ae

Interpro

IPR011331   Ribosomal_L37ae/L37e        + More
IPR002674   Ribosomal_L37ae       
IPR011332   Ribosomal_zn-bd       

SUPFAM

SSF57829   SSF57829       

Gene 3D

2.20.25.30    

ProteinModelPortal

A0A0L7LI15   A0A2A4KAW8   G0ZEH6   E3UPD3   E7DZ58   D1LYM1   + More
S4PT08   A0A212FDK8   Q5UAP9   Q962S6   A0A2W1BD07   Q6F460   I4DM52   I4DIR2   A0A2P8ZJV5   A0A0P5HFW9   D1M837   Q4GX93   Q4GX89   A0A0P5VUK8   A0A2A3EAU7   A0A088A6A4   E2BM82   A0A067RA69   D6WXL6   A0A0N8B7F4   A0A0N8AQC4   A0A226EHT2   A0A1D2NL26   Q1W2A6   A0A0P5UI72   A0A1S3D583   A0A0P5UTT4   A0A0J7KWZ2   A0A158NQJ7   E1ZXG1   Q4GX91   Q4GX92   A0A0N8B9I5   Q4GX90   A0A0P5GIT9   A0A3L8E320   A0A1B6ER61   A0A164Q1K7   A0A0N7ZEI6   A0A2J7RBU2   J3JVL5   A0A0N0BC79   E9FUX6   A0A0P5EF83   B1P1V7   A0A151IP97   Q56FF8   A0A0P5UYU9   F4WKB0   A0A0N8BPM7   A0A195D3R4   T1GTV0   A0A0P5L8N5   K7J907   B4LUF1   B4KGT1   B4MU13   A0A1A9UTA9   A0A1B0BSE6   A0A1A9WK91   D3TQ13   U5EUS2   A0A182K7K6   B8RIV7   B0WLK8   T1DF29   A0A2M3ZZN0   A0A2M4C4S8   W5JIP1   Q1HR76   A0A182F1P0   A0A023EEB3   A0A0P5GDL2   A0A084W8P6   A0A1I8N6Y1   A0A1I8PWR3   A0A1L8EHP1   A0A182JBN7   B4JAT4   A0A0P4WP00   A0A0P5J0H0   A0A0K8TPP0   U5EY52   A0A0P6GA08   A0A1D1Z283   A0A3B0K2W7   Q29MW3   B4G8M7   B4P3T2   B3MPA1   B4I1D0   B3N4S6   B4NRX6   A0A1W4VDF6  

PDB

4V6W     E-value=6.91396e-28,     Score=301

KEGG

692710    K02921 large subunit ribosomal protein L37Ae | (RefSeq) RpL37A; ribosomal protein L37A

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0006412   GO:0003735   GO:0005840   GO:0005622   GO:0003677   GO:0004518   GO:0003824   GO:0006334   GO:0003779   GO:0016021  

Length:

90

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18535

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.77761

inside

1  -  90

 

 

Pi

268.446348

Theta

203.847145

Tajima's D

0.932941

CLR

0.024919

CSRT

0.637518124093795

Interpretation

Uncertain