Gene

KWMTBOMO01375

Pre Gene Modal

BGIBMGA008902

Annotation

PREDICTED:_estradiol_17-beta-dehydrogenase_11-like_[Papilio_polytes]

Location

Bomo_Chr3(+):9266551-9296486      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.044

CDS

ATGTCTGAACAAACCCAAGAGTATATAAACGGGATGAGACCGGGGCCTCTCACGCGGGAGATCCCGGAGTGTATGAGGGACAAATATACCGTCGTGCAATCAATTATAGACGTTATAGTGTTTGTCATCGTCGGTGTGGGATATGTTATACAAGCGATATACAGGACTATAGTTGGGTATCCTAAGAGAGATCTCAAAGGAGGCGTGGCGGTTGTTACTGGAGGCGGCGGAGGCTTGGGCAGTCTTATAGCCTTGAGGCTAGCGCGACTCGGCTGCACCATTGTCCTGTGGGATATCAATAAGCAAGGTTTGGAAGATACAGTGAAGCTTGTAAAAGGCGTCGGTGGTAAATGCTACGGCTACGTAGTAGATCTCGCCAGCAGGGAAGACATCTACCGTGTCGCTAAAAAAGTTGAAGAGCAGGTTGGGAAGGTAAACCTACTTATCAATAATGCAGGCGTCGTCTCAGGACACTACCTCCTGGAGACTCCAGACCACCTCATTCAAAGGACTTTCGATGTCAACATTCTTGCACATTTCTGGACGGTGAAAGCCTTCCTGCCAACCATGATCAGTCAAAATGATGGTCATATAGTGACCATCGCTTCAATGGCCGGACACGTGGGTGTTGCCAAGCTGGTCGACTACTGTTCGTCAAAAGCTGCTGCCTGCGGCTTCGACGAGGCTCTCAGGGTCGAGCTAGAGACGAAAGGCGTTAAGGGTGTGAAGACTTCGCTGATATGTCCGTACTTCATTCGATCGACGGGCATGTTTGAAGAGGTTAACTCAAGGTTCGTGCCACAGCTGAATTCGAACGAGGTGGCGGATCGTGTTGTGCTCGCGATACGCACCAGTGAGCCTTTCGCTCTAATACCAGGTTTCTTTCGGGTGTTACTACCTTTCAAATGGATAGTACCTTGGCCGTGTATATCAGAGCTGATACGCGGTCTGGTGCCGGACGCGGTCCCTGTGGCCCCTAACGCGCGTATAGAGACACCATCCTCAGCACCAAAAATAGACATGAAAACGGACTCCAGGCCTATGTCACTGCTGCCCCCAGCAAGACACGACCGCCAGGTTTGA

Protein

MSEQTQEYINGMRPGPLTREIPECMRDKYTVVQSIIDVIVFVIVGVGYVIQAIYRTIVGYPKRDLKGGVAVVTGGGGGLGSLIALRLARLGCTIVLWDINKQGLEDTVKLVKGVGGKCYGYVVDLASREDIYRVAKKVEEQVGKVNLLINNAGVVSGHYLLETPDHLIQRTFDVNILAHFWTVKAFLPTMISQNDGHIVTIASMAGHVGVAKLVDYCSSKAAACGFDEALRVELETKGVKGVKTSLICPYFIRSTGMFEEVNSRFVPQLNSNEVADRVVLAIRTSEPFALIPGFFRVLLPFKWIVPWPCISELIRGLVPDAVPVAPNARIETPSSAPKIDMKTDSRPMSLLPPARHDRQV

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

S4PTF3   A0A194RN06   A0A194Q0K1   A0A1Q3G5J9   A0A2A4KBK3   A0A2H1WH70   + More
A0A1S4FQ43   A0A182QJD4   Q16TB7   A0A182N8S1   A0A182R6X3   A0A182YHE1   A0A1W7R897   U5EXD2   A0A182VSW9   Q7Q0P2   B3MU63   A0A182I0S2   A0A1J1HZH1   B3NKV8   A0A1W7R8Z7   W5JHS0   A0A1Q3G4U4   A0A1Q3G4S7   A0A1S4H3D5   A0A0J9R5G9   B4JEA4   A0A1Q3G4T1   A0A3B0JIE0   T1D655   B4Q3X4   B4IFJ2   B4P708   A0A0J9R697   Q9VIG6   B4MZT9   A0A0M4EC92   T1DGN0   B4LUM3   A0A1W4UVS9   Q8SYX3   Q29NR5   B4GJH1   W8B5P7   T1PKV9   A0A1L8DIT9   A0A1I8MP89   B4KKZ9   A0A1I8PKM0   A0A0A1XI67   A0A034W5U9   A0A0K8WHU1   B0W9U0   A0A1A9WZU0   A0A026VVV7   A0A182XM85   K7ITC0   A0A182P886   A0A088A186  

Pubmed

23622113    26354079    17510324    25244985    12364791    17994087    + More
20920257    23761445    22936249    24330624    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    23185243    24495485    25315136    25830018    25348373    24508170    20075255   

EMBL

GAIX01012138    JAA80422.1    KQ459989    KPJ18715.1    KQ459591    KPI96940.1    + More
GEYN01000181    JAV44808.1    NWSH01000002    PCG81052.1    ODYU01008576    SOQ52296.1    AXCN02001862    CH477653    EAT37754.1    GEHC01000256    JAV47389.1    GANO01002593    JAB57278.1    AAAB01008980    EAA13950.4    CH902624    EDV33392.1    APCN01005251    CVRI01000037    CRK93355.1    CH954179    EDV54481.2    GEHC01000035    JAV47610.1    ADMH02001476    ETN62445.1    GFDL01000256    JAV34789.1    GFDL01000235    JAV34810.1    CM002910    KMY91266.1    CH916368    EDW03624.1    GFDL01000241    JAV34804.1    OUUW01000006    SPP82127.1    GALA01000228    JAA94624.1    CM000361    EDX05690.1    CH480833    EDW46414.1    CM000158    EDW89977.1    KMY91264.1    KMY91265.1    AE014134    BT150343    AAF53953.3    AGW30430.1    CH963920    EDW77874.1    CP012523    ALC40351.1    GALA01001586    JAA93266.1    CH940649    EDW64209.1    AY071263    AAL48885.1    CH379058    EAL34579.2    KRT03678.1    KRT03679.1    CH479184    EDW36787.1    GAMC01017944    JAB88611.1    KA649402    AFP64031.1    GFDF01007718    JAV06366.1    CH933807    EDW12749.2    GBXI01003233    JAD11059.1    GAKP01008863    JAC50089.1    GDHF01025215    GDHF01001884    JAI27099.1    JAI50430.1    DS231866    EDS40507.1    KK107796    EZA47616.1    AAZX01003330    AAZX01004515   

Proteomes

UP000053240    UP000053268    UP000218220    UP000075886    UP000008820    UP000075884    + More
UP000075900    UP000076408    UP000075920    UP000007062    UP000007801    UP000075840    UP000183832    UP000008711    UP000000673    UP000001070    UP000268350    UP000000304    UP000001292    UP000002282    UP000000803    UP000007798    UP000092553    UP000008792    UP000192221    UP000001819    UP000008744    UP000095301    UP000009192    UP000095300    UP000002320    UP000091820    UP000053097    UP000076407    UP000002358    UP000075885    UP000005203   

PRIDE

Q9VIG6    Q8SYX3   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

S4PTF3   A0A194RN06   A0A194Q0K1   A0A1Q3G5J9   A0A2A4KBK3   A0A2H1WH70   + More
A0A1S4FQ43   A0A182QJD4   Q16TB7   A0A182N8S1   A0A182R6X3   A0A182YHE1   A0A1W7R897   U5EXD2   A0A182VSW9   Q7Q0P2   B3MU63   A0A182I0S2   A0A1J1HZH1   B3NKV8   A0A1W7R8Z7   W5JHS0   A0A1Q3G4U4   A0A1Q3G4S7   A0A1S4H3D5   A0A0J9R5G9   B4JEA4   A0A1Q3G4T1   A0A3B0JIE0   T1D655   B4Q3X4   B4IFJ2   B4P708   A0A0J9R697   Q9VIG6   B4MZT9   A0A0M4EC92   T1DGN0   B4LUM3   A0A1W4UVS9   Q8SYX3   Q29NR5   B4GJH1   W8B5P7   T1PKV9   A0A1L8DIT9   A0A1I8MP89   B4KKZ9   A0A1I8PKM0   A0A0A1XI67   A0A034W5U9   A0A0K8WHU1   B0W9U0   A0A1A9WZU0   A0A026VVV7   A0A182XM85   K7ITC0   A0A182P886   A0A088A186  

PDB

1YB1     E-value=1.07979e-47,     Score=479

KEGG

101745050    K15734 all-trans-retinol dehydrogenase (NAD+) [EC:1.1.1.105] | (RefSeq) estradiol 17-beta-dehydrogen

PATHWAY

00830    Retinol metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005811   GO:0016491   GO:0004745  

Length:

360

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

40.1555400000001

Exp number, first 60 AAs:

21.90877

Total prob of N-in:

0.67945

POSSIBLE N-term signal

sequence

inside

1  -  30

TMhelix

31  -  53

outside

54  -  67

TMhelix

68  -  90

inside

91  -  360

 

 

Pi

276.631667

Theta

194.315034

Tajima's D

1.526796

CLR

0.318621

CSRT

0.792610369481526

Interpretation

Uncertain