Pre Gene Modal
BGIBMGA008999
Annotation
Synaptonemal_complex_protein_[Operophtera_brumata]
Location in the cell
Nuclear Reliability : 4.717
Sequence
CDS
ATGTCAAACAAAGAAAAGAAAAAGATTGACGAAAATAAGAAGAAGCTGAATGTTAATGAAAAGAAAAAAAGACAATCTATGAAAGAAAGTAGCATGAGTCTGGATAGCCTTGAAGAAACTCCACTGCCTAGTTCGAATAGTAAAAAACAACAATCAGTTGGAATAAATACCGAGCTTTTATGTGTTCCATGTGTGATACACGATGCCCCAGATGAATCCAAAAATTACAATACTCAAAGTAAATTCCTTCCGAAGAAAAGTTGTAACAATAGTGTTGTTTCCGATGTGCAAGTGGAAATGCTATATGAAAACCCTGTAATGATGCATAAGATTAAAACAAAGAAAGCGTCAAAAGAGCTACCAGCTGCCATTCATAATATAGCCAATTCGACAGAAGATAAAAGTTTTCATGACAGCACTGATTCTATAGTAAATTTAGAACCTATGGAACCTTTGAATAACGATAACATAATTTTAGATAGTAGTAATAACGACAATGTATCGGTTATCGATGAGAAATATGAAAACGAAGTATGCAAAGATGGTGACGAAAAGGTAAATTATAATTTATGTGTTGATAACATTGAAGAAAACTATACTCTCGATCTAAGCGATGAGGATGAAGAAGACGGTAATCTTGAAAGACGCCACGGCAGCGGCGAAACTTACACAAAATTTACTGAAAATCCTGCCGATTTAGAAGAATTTATGAATATCACTGACAAAATGCTGGCAACGCAAACTTCAAACGTTGAAATAGAAAACCAAATTTATGATCTTTCAACTCCGCAAACGAATTCCATAGAAGCTCTTAACAATTCTACCGAGAACCTTGAAAACCCAATTTCGGAAGATCGTCACGAATTTTCAGAAACCTTCGATGAATTGAAAAAAAATTTTAAAATGCTACTAGATGGGGCCGGTGATAACATCCAAAACGTTATAAATAAAGACCTACAACTAAAACAGGAAGCGGAAAAGAAAGTATGTGACATGGAACACATTATTGTTTACGAACTAAATAACGCGAGTCGTCAATCAACTAAAGATAAAGAACATCGAGAAAAAAAAAAACCGAAGCTCTCTCTGCCAGATATAACGCAGAACAACAAAACTACAAGAATCTCTGGCAACAAGAAGAGAATGCAGAAAATATGCGCTCATTCGAATAAGAACAAAATGTTTGCAGATCAAACACGAAGCAATAAAGAATATCAAACATTCATTATCAAAAAAAACAATGACGATAACAGCGATGGCCAGTCCGTTTCTTCAGAGGCTCCTCCACTAAAATTGCCTAGAATAGAAAATAAGAGGTTAGAAGGTAGAGAATTGAATGGTCACATTTAG
Protein
MSNKEKKKIDENKKKLNVNEKKKRQSMKESSMSLDSLEETPLPSSNSKKQQSVGINTELLCVPCVIHDAPDESKNYNTQSKFLPKKSCNNSVVSDVQVEMLYENPVMMHKIKTKKASKELPAAIHNIANSTEDKSFHDSTDSIVNLEPMEPLNNDNIILDSSNNDNVSVIDEKYENEVCKDGDEKVNYNLCVDNIEENYTLDLSDEDEEDGNLERRHGSGETYTKFTENPADLEEFMNITDKMLATQTSNVEIENQIYDLSTPQTNSIEALNNSTENLENPISEDRHEFSETFDELKKNFKMLLDGAGDNIQNVINKDLQLKQEAEKKVCDMEHIIVYELNNASRQSTKDKEHREKKKPKLSLPDITQNNKTTRISGNKKRMQKICAHSNKNKMFADQTRSNKEYQTFIIKKNNDDNSDGQSVSSEAPPLKLPRIENKRLEGRELNGHI
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
IPR026319
ZC2HC1
ProteinModelPortal
Ontologies
KEGG
GO
PANTHER
Topology
Length:
449
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.03064
outside
1 - 449
Population Genetic Test Statistics
Pi
244.567652
Theta
224.379225
Tajima's D
0.388568
CLR
0
CSRT
0.477826108694565
Interpretation
Uncertain
