SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01347
Pre Gene Modal
BGIBMGA008893
Annotation
PREDICTED:_putative_TAF11-like_protein_ENSP00000332601_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.699
 

Sequence

CDS
ATGTCTAATCACGACGCTCTTTTTGAAGCTGAACGATTAAAAGAAGAAGAATTAGCACGAGAATTGGAACATAGTGACTCCATTGAGGATGATTCTCATGACATTTCTATGGAAATTGAAGAGAAACTACTTAAGGAGGAACCGGAGTATACAACTTTGGTTAACTATGGTGAAAGCGATCAGAATACAAATATTGAAACTGAGGTGATAGATACATATGCAGAAATTTCTCAAAATGTTGAAACTGTTCACAAAGCTGATGAACTTGGAAATATTTATACAGACAATTCTGAATACTTGAACCAAACAGATGTTCTCACTGATGTAACTGACCATTATGAGTCATATGGAAATGACTATCAGTTTGAAAATTCTTACAACCAGTTTCAGTCCGATGGTGAAAAATATGACAGAGGAGTTGGTGATGCAGAATCTTCAGTAGTACCAGCAACCACTGACTTTCATCACACTGAAAGTTCCCATATTTATGAGTTTCAAACTGCTGAGGATCTTATTAACGAAAGGGAGAGAGAAAAAAAGAGTAAGAAAGAGCTGGAAGAAGAAGAAAGGGAGAAAATGCAGGTTTTGGTGTCAAATTTCACTGAAGAACAATTGAATAGATATGAGATGTATAGAAGAGCAGCCTTTCCAAAAGCTGCTGTAAAGAGACTTATGCAAACAATCACCGGTTGTTCTGTTGGACAGAATGTTGTTATTGCTATGTCTGGTATTGCCAAGGTCTTTATTGGTGAAGTTGTTGAAGAAGCCTTGGAAGTTTTAGAGAAATCTGGTGAGTCAGGTCCCTTACAGCCAAAACATCTACGCGAAGCTCTGAGGCGTTTGAGGGTGAGAGGTGCTATTCCCTCAAGAAAAGTTCACAGGAGTTTCTTCAAGACCTAG
Protein
MSNHDALFEAERLKEEELARELEHSDSIEDDSHDISMEIEEKLLKEEPEYTTLVNYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIYEFQTAEDLINEREREKKSKKELEEEEREKMQVLVSNFTEEQLNRYEMYRRAAFPKAAVKRLMQTITGCSVGQNVVIAMSGIAKVFIGEVVEEALEVLEKSGESGPLQPKHLREALRRLRVRGAIPSRKVHRSFFKT

Summary

Pfam
PF04719   TAFII28
Interpro
IPR009072   Histone-fold        + More
IPR006809   TAFII28       
SUPFAM
SSF47113   SSF47113       
Gene 3D
PDB
6MZL     E-value=1.36005e-31,     Score=339

Ontologies

Topology

Length:
299
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.06028
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01993
outside
1  -  299
 
 

Population Genetic Test Statistics

Pi
216.392407
Theta
187.27328
Tajima's D
0.490028
CLR
0.643691
CSRT
0.507524623768812
Interpretation
Uncertain
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