Silkworm Genome Informatics Database

Gene

KWMTBOMO01343

Annotation

PREDICTED:_uncharacterized_protein_LOC105384490_[Plutella_xylostella]

Location

Bomo_Chr3(+):8313225-8319824 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.247

CDS

ATGTCAGAAGAAAAACCTGAATTGATGGTTATGACGCAGGAGCAATTCACGACACTCATTAACAAGTTGTCAATTACAAACGAAGGTAGCCAACACAAAAGCAGTTTCGCTCGTTGCACAAAAAGGTACGACGGAGAAAGAAATCATAATAAAGTGGAAGAGTTTATCACAAATATTACTATCTACAAGAAAATTGAAAAAATCACCGACGAAGACGCTCTCGAAGGATTAACGTTGTTACTAACAGGACAAGCAGCTACGTGGTGGAGTGGCGTCAAAGGTGAGATAAAAAAGTGGAATCAAGCTTTAGACGCGATCAGAAGTGCATTTGCCCCAAAAATGCAACCGCATGAAGTTTATCTGGAATTGTTTGCGAAGAAGCAAACAAACGAAACTATTGATGCATTCGTTTGTGACAAACGTGCCTTGCTATCGCATCTTCCAGCAAAAAGGCACAAGGAAGAAGAGGAACTGGATTTCGTATACGGACTCCTCAATATCCGCTTCAAAAAAGAAATTCCTCGCTATGAGATCAAATCGTTCTCAGAGCTATTGGAACGAGGTCGACATATTGAAAACCTTGCCAAAGAAGCCGAAGAAATTGCAGAAACTAGCCTGCGCACGGGTATTGAGAGGAAGCAGCCGAAAAGATGTTCGTACTGTGGCAAGAAAGGCCATCTTCAAGAAGTTTGCCGTAAAAGATTGTCAGAGGAAGCAATGGGAAAAAATATGTCCTCAAGCGAAATTGTACAGATAAGCTGTTATGGTTGTGGAGCACCGGGGGTATTTCGCAGCAACTGCAAAACGTGTAAAAACAATGAAACGCCGCCAAAACCAGTTTCATTTTACGCACTACAAACTACCATTAATAATGCCAAAATACCAACCATTGAAATCAACGTGAAAGGCGAACATGGCTACGCACACATTGATACCGCAGCTAAAACTAGTATGGCAGGTACACATTTGTACAAGACACTAGTATGTCAAGGTACTAAATTTGACGAAAAGCCAGCTGACGTCATCCTCGCTGATGGTACCAAACGAATAACGAAGCTACTAACTGCTAAAGTGGATGTTGTGGTAGGAGGACGACTTTTACCTATCACATTTTCTGCAATGCCAGAAGCAGAAGACAACAGAACCCTGCTTGGTATAGATTTCTTGGAGAAGTTTGGAATTGTTCTAAATTTACCCCAACGAGTGTGGTACTTCTTGGATGATCCAAAACAAAAATTTCAGTTTATAAGATTGTCAAGCGACATAGTTCCGTTAAAGGCAGCTAGATCGCTGACCTTTAATGAGAGACCTTGCAAGATTGACAACGGTGAAGCGGGTTTGAGTGATTTCCTAAAATACGCTAAGGAGTTAAAGATGCTTTCACCAATGAAAAATACTCCTTCACCACTTCACAGCGAACATGGTGATATCAGTCCCATCCCAACCAAGAAAGCCCGTTATGCATTGGTAAAATTGGACACACCGCCACGACCAGTGCGACCACGTGAACCAGCCGATGCAGCATCTTGTGTTGATCCTCGCATTACTTATTTACCAATAAATCCTATAAACATGTATTCTTTGGACATTTATTTGAAACCTCACGAAGGCTCTGTGTTCACAAATGAAGAACGAGTAGTATTCAATGATCTACTTCATGAATATAGGGACATATTCAATAAAAACGGAAATCCCACACCGTTCGCAGTACATAGAATAGACACGGGAACACATCCGCCTATTAGTGTTAAGCCCTACAGATTGTCACCAGCTCGACAAACACAACTTAGGGAAAAACTTGATGAAATGATTAGTAATGATATAATCGAAGAGAGTGATTCACCATGGGCAGCACCCGTTATTCTAGTACCAAAAGGGGATAACGACGTTCGAGTTTGCATAGACTATAGAAAACTAAATGAAATCACAAAACCAGATAGGTATCCATTACCACGTATTGATGACCTGCTTCATCAAGCAAAGGGGTTGCCATATATGTCTACACTCGACTTACAATCAGGATACTATCAAATAGTGGTAAATCCAGACGATCAAGACAAAACAAGCTTTATATCACCGTTTGGAAACTTTCGTTTTAAAAGAATGCCATTTGGATTACGAAATGCTCCAGCAACTTTTCAAAGGCTAATGGATAAATTTATACAAGGCTTAAAGACAAAGTACACACTAGCATACTTAGATGATTGCATAACAAGAGCATACTCCTTTAAAGAGCATGTAGAGAATCTGCGAGAAATATTTAATAAGCTACGTGAGTATAATCTCAGAGCTAACAGAAACAAATGTAAATTCGGGTGCACAGAAATAAAATACCTAGGACATATTATTGTACCTGAGGGAATAAAGTCTGACCCAGAAAAGGTATCAGCAATTATGAAACTCAACAAACCCAAAACAATGAAACAATTAATGTCGTTTCTCCAAACTGCGTCATGGTATCGAAGATTCATAAGAAATTTTGCACAAATTGCACAACCTTTAACCAATCTAACAAAGAAGAAAGTAAGTTGGAAATGGGAGTCAAAACAACAAGAAGCTTTCGACAAATTAAAGCTCGCTTTGACGACTGCCCCAGTCTTAAGACAAGCTAACACTAATTTACCTTTCACAATTAAAACAGATGCAAGCCAGTATGCTATAGGAGCAGCTTTAGTGCAGGGGGAGGGAGAAGAAGAACACCCAGTAGAATACGCAAGTAGACTCCTGAATACAGCTGAATGCAATTACACTGTAACTGAGAAAGAAGCATTAGCCATAGTTTGGGCTATTTCAAAGTTCCGAGGATACATAGAAGGAACAAAATTTGTGACTATAACAGATCACCAACCGCTGAAGTGGTTAATGAACCTAAAAACTCCAACGGGTCGTCTACCACGTTGGGCACTCCAGTTACAACCCTATGATTTCCAAATTAAGTATTCTCCAGGACGAACTAATGTCGTGGCCGACACACTATCTCGACCACCATGTCAGGATCATGATGAAGATTGTACCATTTGTCGTATAGATCTCGAGATGCCGAAACCTAATGAAAAACATTTAACAGACGAACAATTAAAAGATGAAGTTCTAAAAAATATAATTGAAACTTTAGAAGAAGGAGGACATTCCATAAACTATGCTGAATATGTTAAAAAAGGATATATACTACATAAAGGTGTTTTGTATCTTTACACTCCAGAACAAGACGACGAAAATGCAAAATTAGTAGTCCCTTCTCACGAAATAACTAACGTCCTTAAAGCGTTTCACGATTCACACACTGCTGGACATATGGGAGCAGAAAGAACTCTTCAGCGAATCATAAATAAATTTTATTGGAAAGGGCAACGAAAAGATGTCATAAAATACGTGAAAACGTGTGAAGAATGTCAGAAATATAAACCTTCAAATCAGAAACCAGCAGGTTTATATCAATCTACTCCAAATACCCAGAGGTTTGAAGTATTATCAGTAGACTTGTTTGGTCCGTTACCAAAAGGCCTTTCTGGTGAAAAATGGATATTTATAATAGAAGACATGGCTTCACGATGGGTTGAAATGTTTCCGTTGAGAGAAGCTACAGGTGAAAGCTGCGCTTTGATTTTGCTAAATGAAATATTTCTCCGATACGGATTACCACGAAAAATTGTTTGTGATAATGGAGTACAGTTTATATCGGCAGTAATGCAAAAACTTACATACTGCTTAGAAATCCAACAAGTTTTCACTCCAGTATATCATCCTGAACCAAATGTAGTTGAAAGAAAGAATAGAGACATGAAAACACAAATAGCTATAATGGTTAAAGACAAACACAATTTGTGGCCGTCAACACTTCCAGCTATACGATTTGCAATGAATACAGCTCGTTGTCGATCTACATGCTTTTCACCAGCCTACTTAACGTTTGGAAGAGAATTACGGACACCGTACGAATTGACTCATGACCTTAGTTCGATAGTAGCATCTGAAAATTTTCTGGCAGAAATCACACCTAAGCTAAAACAACTAGCCCAGGATTTGAAACTAGCAAGAGAAAATGCAGAGATCAACATGGATGAAGCTTGTCATAAATCAAATAATAAGAGAAGACCAGACCCAGGACATAAAGTTGGAGACCTAGTCTTAATAGAATCCCATCCTATTAGTAATCTTAACAAGCAATTTTCTGCCAAATTTGCACCAAAGCAAGATGGTCCTTATGTGATAATGAAGAAACACGGTACTTCTACCTATGATGTTGCACACCCAGATTCACCAGATATATCAATTGGGAAATACCACTCCTCTGCAATGACAAAATTTGAGAAGAGAGCTGATAGCATAGTTCAGCCGACTTATCCAATACGTCGTCGAGGACGACCACTGATGGTTTGGTGGGGTATTAGCTATGAAGGAGTGACCGAGCCATACTTTTGTGAAAAAGGTATCAAAACATCGGCACAAGTATATCAAGATACCATTCTTGAGAGGGTAGTGAGGCCCCTTAACAACACCATGTTCAATAATCAAGAATGGTCCTTCCAGCAAGACTCGGCGCCAGGTCATAAAGCTCGGTCTACGCAGTCTTGGTTGGAAACAAACGTTTCGGACTTCATCAGAGCTGATGAAGACTGGCCGTCGTCTAGTCCCGATCTTAATCCGCTGGATTATGATTTATGGTCAGTTTTAGAGAGTACGGCTTACTCTAAACGCCATGATAATTTAGAGTCCCTAAAACAATCCGTACGATTGGCAGTTAAAAAATTTCCCATGGAAAGAGTGCGTGCTTCTATTGATAACTGGCCTCAACGTTTGAAGGACTGCATTGCAGCCAATGGAGACCACTTCAAATAA

Protein

MSEEKPELMVMTQEQFTTLINKLSITNEGSQHKSSFARCTKRYDGERNHNKVEEFITNITIYKKIEKITDEDALEGLTLLLTGQAATWWSGVKGEIKKWNQALDAIRSAFAPKMQPHEVYLELFAKKQTNETIDAFVCDKRALLSHLPAKRHKEEEELDFVYGLLNIRFKKEIPRYEIKSFSELLERGRHIENLAKEAEEIAETSLRTGIERKQPKRCSYCGKKGHLQEVCRKRLSEEAMGKNMSSSEIVQISCYGCGAPGVFRSNCKTCKNNETPPKPVSFYALQTTINNAKIPTIEINVKGEHGYAHIDTAAKTSMAGTHLYKTLVCQGTKFDEKPADVILADGTKRITKLLTAKVDVVVGGRLLPITFSAMPEAEDNRTLLGIDFLEKFGIVLNLPQRVWYFLDDPKQKFQFIRLSSDIVPLKAARSLTFNERPCKIDNGEAGLSDFLKYAKELKMLSPMKNTPSPLHSEHGDISPIPTKKARYALVKLDTPPRPVRPREPADAASCVDPRITYLPINPINMYSLDIYLKPHEGSVFTNEERVVFNDLLHEYRDIFNKNGNPTPFAVHRIDTGTHPPISVKPYRLSPARQTQLREKLDEMISNDIIEESDSPWAAPVILVPKGDNDVRVCIDYRKLNEITKPDRYPLPRIDDLLHQAKGLPYMSTLDLQSGYYQIVVNPDDQDKTSFISPFGNFRFKRMPFGLRNAPATFQRLMDKFIQGLKTKYTLAYLDDCITRAYSFKEHVENLREIFNKLREYNLRANRNKCKFGCTEIKYLGHIIVPEGIKSDPEKVSAIMKLNKPKTMKQLMSFLQTASWYRRFIRNFAQIAQPLTNLTKKKVSWKWESKQQEAFDKLKLALTTAPVLRQANTNLPFTIKTDASQYAIGAALVQGEGEEEHPVEYASRLLNTAECNYTVTEKEALAIVWAISKFRGYIEGTKFVTITDHQPLKWLMNLKTPTGRLPRWALQLQPYDFQIKYSPGRTNVVADTLSRPPCQDHDEDCTICRIDLEMPKPNEKHLTDEQLKDEVLKNIIETLEEGGHSINYAEYVKKGYILHKGVLYLYTPEQDDENAKLVVPSHEITNVLKAFHDSHTAGHMGAERTLQRIINKFYWKGQRKDVIKYVKTCEECQKYKPSNQKPAGLYQSTPNTQRFEVLSVDLFGPLPKGLSGEKWIFIIEDMASRWVEMFPLREATGESCALILLNEIFLRYGLPRKIVCDNGVQFISAVMQKLTYCLEIQQVFTPVYHPEPNVVERKNRDMKTQIAIMVKDKHNLWPSTLPAIRFAMNTARCRSTCFSPAYLTFGRELRTPYELTHDLSSIVASENFLAEITPKLKQLAQDLKLARENAEINMDEACHKSNNKRRPDPGHKVGDLVLIESHPISNLNKQFSAKFAPKQDGPYVIMKKHGTSTYDVAHPDSPDISIGKYHSSAMTKFEKRADSIVQPTYPIRRRGRPLMVWWGISYEGVTEPYFCEKGIKTSAQVYQDTILERVVRPLNNTMFNNQEWSFQQDSAPGHKARSTQSWLETNVSDFIRADEDWPSSSPDLNPLDYDLWSVLESTAYSKRHDNLESLKQSVRLAVKKFPMERVRASIDNWPQRLKDCIAANGDHFK

Uniprot

A0A3B3SLA7 A0A147BUF5 A0A164KZR4

Pubmed

29240929

EMBL

GEGO01001242 JAR94162.1 LRGB01003224 KZS03675.1

Proteomes

UP000261540 UP000076858

Pfam

PF17921   Integrase_H2C2        + More
PF03732   Retrotrans_gag
PF00665   rve
PF17917   RT_RNaseH
PF00078   RVT_1
PF17919   RT_RNaseH_2

Interpro

IPR041588   Integrase_H2C2        + More
IPR036397   RNaseH_sf
IPR041373   RT_RNaseH
IPR000477   RT_dom
IPR021109   Peptidase_aspartic_dom_sf
IPR005162   Retrotrans_gag_dom
IPR012337   RNaseH-like_sf
IPR001584   Integrase_cat-core
IPR001969   Aspartic_peptidase_AS
IPR001995   Peptidase_A2_cat
IPR041577   RT_RNaseH_2

SUPFAM

SSF50630 SSF50630 + More
SSF53098 SSF53098

Gene 3D

2.40.70.10 3.30.420.10

ProteinModelPortal

A0A3B3SLA7 A0A147BUF5 A0A164KZR4

PDB

4OL8 E-value=5.40229e-76, Score=729

KEGG

101737180 no KO assigned | (RefSeq) uncharacterized LOC101737180

GO

GO:0003676 GO:0004190 GO:0015074 GO:0008270 GO:0016020 GO:0016820 GO:0016042 GO:0005634 GO:0006334 GO:0003779 GO:0016021

Length:

1612

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00661999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00028

outside

1 - 1612

Pi

46.520129

Theta

55.58503

Tajima's D

0.656509

CLR

104.801192

CSRT

0.560521973901305

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree